EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000018574 (Gene tree)
Gene ID: 107091913
Gene Symbol: zgc:114130
Alias: fb92b09|wu:fb92b09
Full Name: zinc finger protein 36%2C C3H1 type-like 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 6518 bases
Position: chrKL652857.1:93329-99846
Accession: 107091913
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000015732	zf-CCCH	PF00642.24	1.2e-20	1	2
ENSCVAP00000015732	zf-CCCH	PF00642.24	1.2e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000023890	-	2732	XM_015386141	ENSCVAP00000015732	426 (aa)	XP_015241627	UPI0007429204

Gene Model

Click here to download ENSCVAG00000018574's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000018574's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000018574	zgc:114130	100	65.287	ENSAPOG00000014912	zgc:114130	98	65.517	Acanthochromis_polyacanthus
ENSCVAG00000018574	zgc:114130	83	62.674	ENSACIG00000017364	zgc:114130	96	63.788	Amphilophus_citrinellus
ENSCVAG00000018574	zgc:114130	100	64.828	ENSAOCG00000022227	zgc:114130	98	65.057	Amphiprion_ocellaris
ENSCVAG00000018574	zgc:114130	51	38.991	ENSAOCG00000024158	sb:cb81	62	42.652	Amphiprion_ocellaris
ENSCVAG00000018574	zgc:114130	100	64.828	ENSAPEG00000015497	zgc:114130	98	65.057	Amphiprion_percula
ENSCVAG00000018574	zgc:114130	50	39.070	ENSAPEG00000022405	sb:cb81	62	42.652	Amphiprion_percula
ENSCVAG00000018574	zgc:114130	63	36.054	ENSATEG00000003462	sb:cb81	73	35.260	Anabas_testudineus
ENSCVAG00000018574	zgc:114130	100	62.156	ENSATEG00000008781	zgc:114130	98	64.220	Anabas_testudineus
ENSCVAG00000018574	zgc:114130	100	59.722	ENSACLG00000022113	zgc:114130	98	60.185	Astatotilapia_calliptera
ENSCVAG00000018574	zgc:114130	100	43.596	ENSAMXG00000038581	zgc:114130	95	44.494	Astyanax_mexicanus
ENSCVAG00000018574	zgc:114130	76	35.955	ENSAMXG00000034874	sb:cb81	73	38.838	Astyanax_mexicanus
ENSCVAG00000018574	zgc:114130	100	58.636	ENSCSEG00000018290	zgc:114130	98	59.318	Cynoglossus_semilaevis
ENSCVAG00000018574	zgc:114130	67	36.513	ENSCSEG00000018283	zgc:162730	94	33.463	Cynoglossus_semilaevis
ENSCVAG00000018574	zgc:114130	99	36.782	ENSDARG00000040503	sb:cb81	60	42.238	Danio_rerio
ENSCVAG00000018574	zgc:114130	100	44.344	ENSDARG00000040725	zgc:114130	96	44.921	Danio_rerio
ENSCVAG00000018574	zgc:114130	65	40.925	ENSELUG00000013045	sb:cb81	99	32.151	Esox_lucius
ENSCVAG00000018574	zgc:114130	100	46.014	ENSELUG00000013151	zgc:114130	97	46.818	Esox_lucius
ENSCVAG00000018574	zgc:114130	100	74.651	ENSFHEG00000000656	zgc:114130	100	75.349	Fundulus_heteroclitus
ENSCVAG00000018574	zgc:114130	79	50.000	ENSGMOG00000017223	zgc:114130	99	53.824	Gadus_morhua
ENSCVAG00000018574	zgc:114130	81	76.218	ENSGAFG00000009949	zgc:114130	93	75.645	Gambusia_affinis
ENSCVAG00000018574	zgc:114130	79	64.985	ENSGACG00000008344	zgc:114130	99	65.579	Gasterosteus_aculeatus
ENSCVAG00000018574	zgc:114130	100	59.954	ENSHBUG00000015051	zgc:114130	98	60.648	Haplochromis_burtoni
ENSCVAG00000018574	zgc:114130	100	53.488	ENSHCOG00000015800	zgc:114130	96	53.440	Hippocampus_comes
ENSCVAG00000018574	zgc:114130	100	41.648	ENSIPUG00000018256	zgc:114130	79	41.958	Ictalurus_punctatus
ENSCVAG00000018574	zgc:114130	62	36.594	ENSIPUG00000011378	sb:cb81	77	34.951	Ictalurus_punctatus
ENSCVAG00000018574	zgc:114130	100	66.591	ENSKMAG00000019287	zgc:114130	98	66.364	Kryptolebias_marmoratus
ENSCVAG00000018574	zgc:114130	62	38.489	ENSKMAG00000013156	zfp36l1a	70	37.895	Kryptolebias_marmoratus
ENSCVAG00000018574	zgc:114130	100	59.674	ENSLBEG00000018387	zgc:114130	98	60.930	Labrus_bergylta
ENSCVAG00000018574	zgc:114130	99	37.413	ENSLACG00000015732	sb:cb81	99	37.071	Latimeria_chalumnae
ENSCVAG00000018574	zgc:114130	74	37.092	ENSLOCG00000014587	sb:cb81	75	37.168	Lepisosteus_oculatus
ENSCVAG00000018574	zgc:114130	100	60.465	ENSMAMG00000007511	zgc:114130	96	61.860	Mastacembelus_armatus
ENSCVAG00000018574	zgc:114130	100	59.954	ENSMZEG00005014410	zgc:114130	98	60.417	Maylandia_zebra
ENSCVAG00000018574	zgc:114130	59	38.314	ENSMZEG00005014415	zgc:162730	69	34.754	Maylandia_zebra
ENSCVAG00000018574	zgc:114130	84	63.158	ENSMMOG00000011504	zgc:114130	95	63.989	Mola_mola
ENSCVAG00000018574	zgc:114130	65	51.852	ENSMALG00000021140	-	96	52.830	Monopterus_albus
ENSCVAG00000018574	zgc:114130	79	60.117	ENSNBRG00000013703	zgc:114130	94	60.234	Neolamprologus_brichardi
ENSCVAG00000018574	zgc:114130	79	61.404	ENSONIG00000005004	zgc:114130	99	61.988	Oreochromis_niloticus
ENSCVAG00000018574	zgc:114130	100	77.367	ENSPFOG00000003653	zgc:114130	100	78.753	Poecilia_formosa
ENSCVAG00000018574	zgc:114130	59	38.129	ENSPLAG00000000946	zgc:162730	60	38.321	Poecilia_latipinna
ENSCVAG00000018574	zgc:114130	100	77.726	ENSPLAG00000000947	zgc:114130	100	79.350	Poecilia_latipinna
ENSCVAG00000018574	zgc:114130	100	76.620	ENSPMEG00000015335	zgc:114130	100	77.546	Poecilia_mexicana
ENSCVAG00000018574	zgc:114130	100	79.767	ENSPREG00000021254	zgc:114130	100	79.767	Poecilia_reticulata
ENSCVAG00000018574	zgc:114130	59	38.007	ENSPREG00000021263	zgc:162730	60	37.591	Poecilia_reticulata
ENSCVAG00000018574	zgc:114130	100	59.259	ENSPNYG00000015546	zgc:114130	98	60.648	Pundamilia_nyererei
ENSCVAG00000018574	zgc:114130	100	38.000	ENSPNAG00000023029	zgc:114130	96	40.757	Pygocentrus_nattereri
ENSCVAG00000018574	zgc:114130	74	37.037	ENSPNAG00000030063	sb:cb81	99	36.486	Pygocentrus_nattereri
ENSCVAG00000018574	zgc:114130	65	35.315	ENSSFOG00015003179	sb:cb81	99	30.330	Scleropages_formosus
ENSCVAG00000018574	zgc:114130	100	60.690	ENSSMAG00000018621	zgc:114130	95	62.014	Scophthalmus_maximus
ENSCVAG00000018574	zgc:114130	59	36.630	ENSSMAG00000018612	zgc:162730	73	35.127	Scophthalmus_maximus
ENSCVAG00000018574	zgc:114130	100	63.991	ENSSDUG00000002237	zgc:114130	100	64.220	Seriola_dumerili
ENSCVAG00000018574	zgc:114130	100	63.678	ENSSLDG00000008496	zgc:114130	100	63.908	Seriola_lalandi_dorsalis
ENSCVAG00000018574	zgc:114130	100	65.278	ENSSPAG00000006856	zgc:114130	98	65.509	Stegastes_partitus
ENSCVAG00000018574	zgc:114130	100	57.737	ENSTRUG00000022473	zgc:114130	98	59.122	Takifugu_rubripes
ENSCVAG00000018574	zgc:114130	90	64.433	ENSXCOG00000012792	zgc:114130	96	64.433	Xiphophorus_couchianus
ENSCVAG00000018574	zgc:114130	100	78.140	ENSXMAG00000026836	zgc:114130	100	78.605	Xiphophorus_maculatus