EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000018602 (Gene tree)
Gene ID: -
Gene Symbol: POP4
Alias: RPP29
Full Name: POP4 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 6528 bases
Position: chrKL653942.1:109663-116190
Accession: 30081
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000015726	UPF0086	PF01868.16	5.1e-21	1	1
ENSCVAP00000015739	UPF0086	PF01868.16	9e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000023967	POP4-202	615	-	ENSCVAP00000015726	204 (aa)	-	-
ENSCVAT00000023899	POP4-201	576	-	ENSCVAP00000015739	191 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000018602's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000018602's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000018602	POP4	87	43.627	ENSG00000105171	POP4	94	67.778	Homo_sapiens
ENSCVAG00000018602	POP4	83	37.879	ENSAMEG00000003172	-	88	37.879	Ailuropoda_melanoleuca
ENSCVAG00000018602	POP4	87	42.788	ENSAMEG00000018329	-	93	42.718	Ailuropoda_melanoleuca
ENSCVAG00000018602	POP4	95	55.656	ENSACIG00000008358	pop4	99	55.656	Amphilophus_citrinellus
ENSCVAG00000018602	POP4	85	59.000	ENSAOCG00000010116	pop4	98	59.000	Amphiprion_ocellaris
ENSCVAG00000018602	POP4	100	55.462	ENSAPEG00000002829	pop4	100	55.462	Amphiprion_percula
ENSCVAG00000018602	POP4	95	55.656	ENSATEG00000013028	pop4	99	55.656	Anabas_testudineus
ENSCVAG00000018602	POP4	91	42.512	ENSAPLG00000014051	POP4	98	42.512	Anas_platyrhynchos
ENSCVAG00000018602	POP4	87	46.078	ENSANAG00000020295	POP4	92	46.569	Aotus_nancymaae
ENSCVAG00000018602	POP4	95	56.109	ENSACLG00000000526	pop4	99	56.109	Astatotilapia_calliptera
ENSCVAG00000018602	POP4	94	48.624	ENSAMXG00000002899	pop4	98	48.624	Astyanax_mexicanus
ENSCVAG00000018602	POP4	94	43.578	ENSBTAG00000002223	POP4	98	44.037	Bos_taurus
ENSCVAG00000018602	POP4	87	46.569	ENSCJAG00000046750	POP4	95	52.326	Callithrix_jacchus
ENSCVAG00000018602	POP4	73	43.605	ENSCAFG00000007630	POP4	93	47.093	Canis_familiaris
ENSCVAG00000018602	POP4	88	44.175	ENSCHIG00000016743	POP4	93	45.146	Capra_hircus
ENSCVAG00000018602	POP4	94	42.202	ENSTSYG00000003488	POP4	98	42.661	Carlito_syrichta
ENSCVAG00000018602	POP4	85	49.693	ENSCAPG00000011105	POP4	91	47.458	Cavia_aperea
ENSCVAG00000018602	POP4	85	44.388	ENSCPOG00000002992	POP4	89	46.701	Cavia_porcellus
ENSCVAG00000018602	POP4	95	42.986	ENSCCAG00000020285	-	99	43.891	Cebus_capucinus
ENSCVAG00000018602	POP4	87	45.854	ENSCATG00000036022	POP4	94	67.778	Cercocebus_atys
ENSCVAG00000018602	POP4	87	45.098	ENSCLAG00000013162	POP4	92	46.078	Chinchilla_lanigera
ENSCVAG00000018602	POP4	87	45.098	ENSCSAG00000004868	POP4	93	45.588	Chlorocebus_sabaeus
ENSCVAG00000018602	POP4	94	37.615	ENSCHOG00000002071	POP4	99	38.073	Choloepus_hoffmanni
ENSCVAG00000018602	POP4	95	44.344	ENSCPBG00000016132	POP4	99	43.891	Chrysemys_picta_bellii
ENSCVAG00000018602	POP4	85	45.500	ENSCANG00000005924	POP4	99	44.601	Colobus_angolensis_palliatus
ENSCVAG00000018602	POP4	95	41.364	ENSCGRG00001017185	Pop4	99	41.629	Cricetulus_griseus_chok1gshd
ENSCVAG00000018602	POP4	95	41.364	ENSCGRG00000008155	Pop4	99	41.629	Cricetulus_griseus_crigri
ENSCVAG00000018602	POP4	92	47.196	ENSCSEG00000002946	pop4	97	47.222	Cynoglossus_semilaevis
ENSCVAG00000018602	POP4	93	47.685	ENSDARG00000101472	pop4	97	48.611	Danio_rerio
ENSCVAG00000018602	POP4	89	43.350	ENSDNOG00000047663	POP4	81	43.842	Dasypus_novemcinctus
ENSCVAG00000018602	POP4	72	32.948	ENSDORG00000008577	Pop4	99	33.526	Dipodomys_ordii
ENSCVAG00000018602	POP4	94	42.202	ENSETEG00000003607	POP4	99	42.661	Echinops_telfairi
ENSCVAG00000018602	POP4	91	31.280	ENSEBUG00000004305	pop4	96	32.701	Eptatretus_burgeri
ENSCVAG00000018602	POP4	60	38.926	ENSEBUG00000010447	pop4	88	31.278	Eptatretus_burgeri
ENSCVAG00000018602	POP4	95	35.071	ENSEBUG00000008575	pop4	99	35.071	Eptatretus_burgeri
ENSCVAG00000018602	POP4	91	69.231	ENSECAG00000020206	POP4	83	69.231	Equus_caballus
ENSCVAG00000018602	POP4	88	39.109	ENSEEUG00000013109	POP4	100	39.604	Erinaceus_europaeus
ENSCVAG00000018602	POP4	98	48.879	ENSELUG00000019812	pop4	100	49.776	Esox_lucius
ENSCVAG00000018602	POP4	85	42.347	ENSFCAG00000001619	POP4	93	42.718	Felis_catus
ENSCVAG00000018602	POP4	99	41.256	ENSFALG00000000206	POP4	97	46.119	Ficedula_albicollis
ENSCVAG00000018602	POP4	87	44.118	ENSFDAG00000017859	POP4	92	44.608	Fukomys_damarensis
ENSCVAG00000018602	POP4	85	64.433	ENSFHEG00000012745	pop4	89	64.433	Fundulus_heteroclitus
ENSCVAG00000018602	POP4	84	50.000	ENSGMOG00000000335	pop4	95	51.295	Gadus_morhua
ENSCVAG00000018602	POP4	99	39.565	ENSGALG00000041972	POP4	96	39.565	Gallus_gallus
ENSCVAG00000018602	POP4	73	52.542	ENSGAFG00000003571	pop4	98	52.542	Gambusia_affinis
ENSCVAG00000018602	POP4	92	56.542	ENSGACG00000014510	pop4	100	60.326	Gasterosteus_aculeatus
ENSCVAG00000018602	POP4	95	44.796	ENSGAGG00000024544	POP4	79	44.796	Gopherus_agassizii
ENSCVAG00000018602	POP4	87	45.098	ENSGGOG00000038346	POP4	92	45.588	Gorilla_gorilla
ENSCVAG00000018602	POP4	95	55.656	ENSHBUG00000021821	pop4	99	55.656	Haplochromis_burtoni
ENSCVAG00000018602	POP4	87	43.137	ENSHGLG00000015798	POP4	92	43.627	Heterocephalus_glaber_female
ENSCVAG00000018602	POP4	87	43.137	ENSHGLG00100009737	POP4	92	43.627	Heterocephalus_glaber_male
ENSCVAG00000018602	POP4	96	51.570	ENSHCOG00000020937	pop4	100	51.570	Hippocampus_comes
ENSCVAG00000018602	POP4	95	49.550	ENSIPUG00000013652	pop4	99	49.550	Ictalurus_punctatus
ENSCVAG00000018602	POP4	89	42.365	ENSSTOG00000011016	POP4	92	44.390	Ictidomys_tridecemlineatus
ENSCVAG00000018602	POP4	87	44.608	ENSJJAG00000013376	Pop4	92	45.588	Jaculus_jaculus
ENSCVAG00000018602	POP4	96	56.502	ENSKMAG00000012250	pop4	100	56.502	Kryptolebias_marmoratus
ENSCVAG00000018602	POP4	95	57.014	ENSLBEG00000018846	-	99	57.014	Labrus_bergylta
ENSCVAG00000018602	POP4	95	56.561	ENSLBEG00000014139	pop4	99	56.561	Labrus_bergylta
ENSCVAG00000018602	POP4	94	44.495	ENSLACG00000008581	POP4	97	44.495	Latimeria_chalumnae
ENSCVAG00000018602	POP4	95	47.059	ENSLOCG00000005597	pop4	99	47.059	Lepisosteus_oculatus
ENSCVAG00000018602	POP4	94	42.661	ENSLAFG00000000084	POP4	98	43.119	Loxodonta_africana
ENSCVAG00000018602	POP4	87	45.098	ENSMFAG00000029606	POP4	92	45.588	Macaca_fascicularis
ENSCVAG00000018602	POP4	87	45.588	ENSMMUG00000017424	POP4	92	46.078	Macaca_mulatta
ENSCVAG00000018602	POP4	87	45.588	ENSMNEG00000031374	POP4	92	46.078	Macaca_nemestrina
ENSCVAG00000018602	POP4	87	43.627	ENSMLEG00000043454	POP4	92	45.366	Mandrillus_leucophaeus
ENSCVAG00000018602	POP4	98	54.018	ENSMAMG00000011716	pop4	99	57.014	Mastacembelus_armatus
ENSCVAG00000018602	POP4	95	56.109	ENSMZEG00005002360	pop4	99	56.109	Maylandia_zebra
ENSCVAG00000018602	POP4	94	42.273	ENSMGAG00000005337	POP4	96	42.273	Meleagris_gallopavo
ENSCVAG00000018602	POP4	87	42.647	ENSMAUG00000020110	Pop4	92	43.137	Mesocricetus_auratus
ENSCVAG00000018602	POP4	88	46.117	ENSMICG00000035730	POP4	91	48.309	Microcebus_murinus
ENSCVAG00000018602	POP4	95	54.091	ENSMMOG00000015321	pop4	99	55.000	Mola_mola
ENSCVAG00000018602	POP4	95	42.986	ENSMODG00000029406	POP4	95	43.439	Monodelphis_domestica
ENSCVAG00000018602	POP4	96	54.260	ENSMALG00000012571	pop4	100	54.260	Monopterus_albus
ENSCVAG00000018602	POP4	85	44.388	MGP_CAROLIEiJ_G0029600	Pop4	89	46.701	Mus_caroli
ENSCVAG00000018602	POP4	85	44.898	ENSMUSG00000030423	Pop4	89	46.701	Mus_musculus
ENSCVAG00000018602	POP4	85	43.878	MGP_SPRETEiJ_G0030699	Pop4	89	46.970	Mus_spretus
ENSCVAG00000018602	POP4	94	37.900	ENSMPUG00000008063	-	98	38.356	Mustela_putorius_furo
ENSCVAG00000018602	POP4	88	42.233	ENSMPUG00000008041	-	93	43.204	Mustela_putorius_furo
ENSCVAG00000018602	POP4	88	31.884	ENSMLUG00000010774	POP4	93	31.884	Myotis_lucifugus
ENSCVAG00000018602	POP4	51	56.190	ENSMEUG00000003636	-	83	56.190	Notamacropus_eugenii
ENSCVAG00000018602	POP4	88	43.564	ENSOPRG00000004736	POP4	99	46.000	Ochotona_princeps
ENSCVAG00000018602	POP4	87	45.098	ENSODEG00000013025	POP4	95	46.078	Octodon_degus
ENSCVAG00000018602	POP4	95	55.656	ENSONIG00000003458	pop4	97	55.656	Oreochromis_niloticus
ENSCVAG00000018602	POP4	94	43.243	ENSOCUG00000015974	POP4	98	43.578	Oryctolagus_cuniculus
ENSCVAG00000018602	POP4	95	54.751	ENSORLG00000020317	pop4	99	54.751	Oryzias_latipes
ENSCVAG00000018602	POP4	95	55.656	ENSORLG00015011624	pop4	99	55.656	Oryzias_latipes_hsok
ENSCVAG00000018602	POP4	95	56.561	ENSOMEG00000002538	pop4	99	56.561	Oryzias_melastigma
ENSCVAG00000018602	POP4	88	44.175	ENSOGAG00000011168	POP4	93	46.377	Otolemur_garnettii
ENSCVAG00000018602	POP4	88	44.444	ENSOARG00000004041	POP4	93	45.411	Ovis_aries
ENSCVAG00000018602	POP4	87	45.098	ENSPPAG00000040372	POP4	92	45.588	Pan_paniscus
ENSCVAG00000018602	POP4	85	42.347	ENSPPRG00000010502	POP4	93	42.718	Panthera_pardus
ENSCVAG00000018602	POP4	85	42.347	ENSPTIG00000016598	POP4	93	42.718	Panthera_tigris_altaica
ENSCVAG00000018602	POP4	87	45.098	ENSPTRG00000010779	POP4	92	45.588	Pan_troglodytes
ENSCVAG00000018602	POP4	87	45.098	ENSPANG00000008546	POP4	92	45.588	Papio_anubis
ENSCVAG00000018602	POP4	87	46.231	ENSPKIG00000004468	pop4	86	48.980	Paramormyrops_kingsleyae
ENSCVAG00000018602	POP4	94	44.954	ENSPSIG00000015690	POP4	100	45.588	Pelodiscus_sinensis
ENSCVAG00000018602	POP4	85	46.000	ENSPMGG00000008608	pop4	96	48.756	Periophthalmus_magnuspinnatus
ENSCVAG00000018602	POP4	92	42.791	ENSPEMG00000014034	-	94	43.256	Peromyscus_maniculatus_bairdii
ENSCVAG00000018602	POP4	85	47.904	ENSPEMG00000019982	-	87	48.503	Peromyscus_maniculatus_bairdii
ENSCVAG00000018602	POP4	58	48.966	ENSPMAG00000006265	pop4	73	48.966	Petromyzon_marinus
ENSCVAG00000018602	POP4	85	72.840	ENSPCIG00000024738	POP4	66	72.840	Phascolarctos_cinereus
ENSCVAG00000018602	POP4	95	60.181	ENSPFOG00000000925	pop4	99	60.181	Poecilia_formosa
ENSCVAG00000018602	POP4	95	60.633	ENSPLAG00000003161	pop4	99	60.633	Poecilia_latipinna
ENSCVAG00000018602	POP4	95	60.181	ENSPMEG00000002475	pop4	99	60.181	Poecilia_mexicana
ENSCVAG00000018602	POP4	99	59.211	ENSPREG00000022403	pop4	96	59.211	Poecilia_reticulata
ENSCVAG00000018602	POP4	87	45.588	ENSPPYG00000009805	POP4	92	46.078	Pongo_abelii
ENSCVAG00000018602	POP4	87	43.204	ENSPCAG00000007737	POP4	92	43.627	Procavia_capensis
ENSCVAG00000018602	POP4	88	43.689	ENSPCOG00000018055	POP4	93	44.175	Propithecus_coquereli
ENSCVAG00000018602	POP4	94	40.909	ENSPVAG00000006069	POP4	98	40.909	Pteropus_vampyrus
ENSCVAG00000018602	POP4	95	56.109	ENSPNYG00000020038	pop4	99	56.109	Pundamilia_nyererei
ENSCVAG00000018602	POP4	95	47.511	ENSPNAG00000005591	pop4	99	47.511	Pygocentrus_nattereri
ENSCVAG00000018602	POP4	87	45.098	ENSRNOG00000027646	Pop4	92	45.588	Rattus_norvegicus
ENSCVAG00000018602	POP4	66	36.646	ENSRBIG00000044769	POP4	82	41.085	Rhinopithecus_bieti
ENSCVAG00000018602	POP4	87	45.098	ENSRROG00000028903	POP4	92	45.588	Rhinopithecus_roxellana
ENSCVAG00000018602	POP4	95	43.891	ENSSBOG00000032445	POP4	99	43.891	Saimiri_boliviensis_boliviensis
ENSCVAG00000018602	POP4	88	45.631	ENSSHAG00000016888	POP4	93	45.631	Sarcophilus_harrisii
ENSCVAG00000018602	POP4	92	47.465	ENSSFOG00015014556	pop4	95	47.465	Scleropages_formosus
ENSCVAG00000018602	POP4	96	58.296	ENSSMAG00000016611	pop4	100	58.296	Scophthalmus_maximus
ENSCVAG00000018602	POP4	96	57.207	ENSSDUG00000019865	pop4	89	57.207	Seriola_dumerili
ENSCVAG00000018602	POP4	96	55.405	ENSSLDG00000001763	pop4	99	55.405	Seriola_lalandi_dorsalis
ENSCVAG00000018602	POP4	88	45.146	ENSSARG00000004748	POP4	94	46.117	Sorex_araneus
ENSCVAG00000018602	POP4	96	59.910	ENSSPAG00000014364	pop4	99	59.910	Stegastes_partitus
ENSCVAG00000018602	POP4	94	41.743	ENSSSCG00000002854	POP4	98	41.743	Sus_scrofa
ENSCVAG00000018602	POP4	83	45.918	ENSTGUG00000008953	POP4	97	46.939	Taeniopygia_guttata
ENSCVAG00000018602	POP4	87	51.961	ENSTNIG00000006401	pop4	100	51.961	Tetraodon_nigroviridis
ENSCVAG00000018602	POP4	88	46.117	ENSTBEG00000002194	POP4	98	44.954	Tupaia_belangeri
ENSCVAG00000018602	POP4	94	43.119	ENSTTRG00000005882	POP4	98	43.119	Tursiops_truncatus
ENSCVAG00000018602	POP4	88	41.748	ENSUAMG00000003049	-	98	40.826	Ursus_americanus
ENSCVAG00000018602	POP4	88	41.748	ENSUMAG00000007522	-	98	40.826	Ursus_maritimus
ENSCVAG00000018602	POP4	87	41.667	ENSVVUG00000016876	-	71	42.647	Vulpes_vulpes
ENSCVAG00000018602	POP4	94	42.661	ENSXETG00000017598	pop4	98	43.119	Xenopus_tropicalis
ENSCVAG00000018602	POP4	99	57.391	ENSXCOG00000017695	pop4	97	57.391	Xiphophorus_couchianus
ENSCVAG00000018602	POP4	99	57.391	ENSXMAG00000013862	pop4	97	57.391	Xiphophorus_maculatus