EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000018617 (Gene tree)
Gene ID: 107090357
Gene Symbol: -
Alias: sfrs1a|sfrs1l|wu:fb52g10|wu:fb97g12|zgc:66146
Full Name: serine/arginine-rich splicing factor 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 6776 bases
Position: chrKL652514.1:2117995-2124770
Accession: 107090357
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000030220	RRM_1	PF00076.22	2.9e-32	1	2
ENSCVAP00000030220	RRM_1	PF00076.22	2.9e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000023933	-	2640	XM_015383692	ENSCVAP00000030220	245 (aa)	XP_015239178	UPI000293BDF9

Gene Model

Click here to download ENSCVAG00000018617's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000018617's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000018617	-	66	41.304	ENSCVAG00000016982	srsf5a	98	36.879
ENSCVAG00000018617	-	78	87.113	ENSCVAG00000005458	-	90	86.813
ENSCVAG00000018617	-	73	66.667	ENSCVAG00000021417	srsf9	73	67.232
ENSCVAG00000018617	-	64	44.375	ENSCVAG00000017240	srsf5b	52	46.821

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000018617	-	98	85.185	ENSG00000136450	SRSF1	95	91.935	Homo_sapiens
ENSCVAG00000018617	-	100	99.184	ENSAPOG00000002748	-	100	99.184	Acanthochromis_polyacanthus
ENSCVAG00000018617	-	78	89.005	ENSAPOG00000008542	-	80	88.442	Acanthochromis_polyacanthus
ENSCVAG00000018617	-	78	89.005	ENSAMEG00000002635	SRSF1	77	89.529	Ailuropoda_melanoleuca
ENSCVAG00000018617	-	79	98.964	ENSACIG00000008091	srsf1a	83	97.927	Amphilophus_citrinellus
ENSCVAG00000018617	-	78	88.442	ENSAOCG00000000337	-	80	88.442	Amphiprion_ocellaris
ENSCVAG00000018617	-	100	99.592	ENSAOCG00000010671	-	100	99.592	Amphiprion_ocellaris
ENSCVAG00000018617	-	100	99.592	ENSAPEG00000009915	-	100	99.592	Amphiprion_percula
ENSCVAG00000018617	-	78	88.442	ENSAPEG00000023352	-	79	88.442	Amphiprion_percula
ENSCVAG00000018617	-	81	86.869	ENSATEG00000021567	-	80	89.062	Anabas_testudineus
ENSCVAG00000018617	-	100	98.785	ENSATEG00000022403	-	100	98.785	Anabas_testudineus
ENSCVAG00000018617	-	78	89.119	ENSACAG00000005542	-	78	91.192	Anolis_carolinensis
ENSCVAG00000018617	-	98	85.185	ENSANAG00000020583	-	93	91.176	Aotus_nancymaae
ENSCVAG00000018617	-	79	67.526	ENSANAG00000025417	-	73	68.063	Aotus_nancymaae
ENSCVAG00000018617	-	95	80.753	ENSAMXG00000035996	srsf1a	79	88.889	Astyanax_mexicanus
ENSCVAG00000018617	-	53	74.194	ENSAMXG00000024373	-	72	77.419	Astyanax_mexicanus
ENSCVAG00000018617	-	98	85.185	ENSBTAG00000014766	SRSF1	78	92.228	Bos_taurus
ENSCVAG00000018617	-	98	85.185	ENSCJAG00000041713	-	93	91.176	Callithrix_jacchus
ENSCVAG00000018617	-	78	82.902	ENSCJAG00000008111	-	86	83.938	Callithrix_jacchus
ENSCVAG00000018617	-	98	85.185	ENSCAFG00000017430	SRSF1	76	92.228	Canis_familiaris
ENSCVAG00000018617	-	98	85.185	ENSCAFG00020025632	-	76	92.228	Canis_lupus_dingo
ENSCVAG00000018617	-	78	90.155	ENSCHIG00000010787	SRSF1	78	92.228	Capra_hircus
ENSCVAG00000018617	-	98	85.185	ENSTSYG00000013899	-	93	91.176	Carlito_syrichta
ENSCVAG00000018617	-	98	85.185	ENSCPOG00000032681	-	78	92.228	Cavia_porcellus
ENSCVAG00000018617	-	98	85.185	ENSCCAG00000029484	-	93	91.176	Cebus_capucinus
ENSCVAG00000018617	-	98	85.185	ENSCATG00000042294	-	93	91.176	Cercocebus_atys
ENSCVAG00000018617	-	98	85.185	ENSCLAG00000014707	-	78	92.228	Chinchilla_lanigera
ENSCVAG00000018617	-	98	84.362	ENSCSAG00000005642	-	76	91.192	Chlorocebus_sabaeus
ENSCVAG00000018617	-	78	90.155	ENSCHOG00000001899	SRSF1	78	92.228	Choloepus_hoffmanni
ENSCVAG00000018617	-	98	84.774	ENSCPBG00000009851	-	78	91.710	Chrysemys_picta_bellii
ENSCVAG00000018617	-	98	85.185	ENSCANG00000029726	-	93	91.176	Colobus_angolensis_palliatus
ENSCVAG00000018617	-	98	85.185	ENSCGRG00001000670	Srsf1	76	92.228	Cricetulus_griseus_chok1gshd
ENSCVAG00000018617	-	98	85.185	ENSCGRG00000005590	Srsf1	78	92.228	Cricetulus_griseus_crigri
ENSCVAG00000018617	-	78	82.212	ENSCSEG00000009973	-	79	82.212	Cynoglossus_semilaevis
ENSCVAG00000018617	-	100	91.429	ENSCSEG00000014272	-	99	91.429	Cynoglossus_semilaevis
ENSCVAG00000018617	-	78	84.729	ENSDARG00000057691	srsf1a	99	85.864	Danio_rerio
ENSCVAG00000018617	-	78	90.155	ENSDARG00000017843	srsf1b	79	92.228	Danio_rerio
ENSCVAG00000018617	-	98	85.185	ENSDNOG00000011737	-	76	92.228	Dasypus_novemcinctus
ENSCVAG00000018617	-	98	85.185	ENSDORG00000015082	Srsf1	78	92.228	Dipodomys_ordii
ENSCVAG00000018617	-	73	90.000	ENSETEG00000005349	-	62	91.111	Echinops_telfairi
ENSCVAG00000018617	-	98	85.185	ENSEASG00005002922	-	76	92.228	Equus_asinus_asinus
ENSCVAG00000018617	-	78	90.155	ENSECAG00000016654	SRSF1	78	92.228	Equus_caballus
ENSCVAG00000018617	-	73	91.111	ENSEEUG00000009255	-	62	92.222	Erinaceus_europaeus
ENSCVAG00000018617	-	78	93.229	ENSELUG00000021646	srsf1a	76	93.750	Esox_lucius
ENSCVAG00000018617	-	98	85.185	ENSFCAG00000002250	-	90	91.713	Felis_catus
ENSCVAG00000018617	-	78	94.340	ENSFALG00000005062	-	76	73.057	Ficedula_albicollis
ENSCVAG00000018617	-	98	85.185	ENSFDAG00000010646	-	78	92.228	Fukomys_damarensis
ENSCVAG00000018617	-	100	99.592	ENSFHEG00000003174	srsf1a	100	99.592	Fundulus_heteroclitus
ENSCVAG00000018617	-	80	89.286	ENSGMOG00000014787	-	80	88.482	Gadus_morhua
ENSCVAG00000018617	-	78	89.637	ENSGALG00000005525	SRSF1	78	91.710	Gallus_gallus
ENSCVAG00000018617	-	78	86.387	ENSGACG00000020621	srsf1b	78	85.864	Gasterosteus_aculeatus
ENSCVAG00000018617	-	98	84.774	ENSGAGG00000022965	-	76	91.710	Gopherus_agassizii
ENSCVAG00000018617	-	98	85.185	ENSGGOG00000004386	SRSF1	93	91.176	Gorilla_gorilla
ENSCVAG00000018617	-	100	99.184	ENSHBUG00000016788	srsf1a	100	99.184	Haplochromis_burtoni
ENSCVAG00000018617	-	66	89.634	ENSHGLG00000000600	-	76	92.073	Heterocephalus_glaber_female
ENSCVAG00000018617	-	66	89.634	ENSHGLG00000000669	-	76	92.073	Heterocephalus_glaber_female
ENSCVAG00000018617	-	98	85.185	ENSHGLG00100016906	-	78	92.228	Heterocephalus_glaber_male
ENSCVAG00000018617	-	79	90.452	ENSHCOG00000018918	srsf1a	78	91.960	Hippocampus_comes
ENSCVAG00000018617	-	79	86.567	ENSIPUG00000017039	srsf1a	80	88.557	Ictalurus_punctatus
ENSCVAG00000018617	-	78	89.583	ENSIPUG00000008750	srsf1b	78	92.188	Ictalurus_punctatus
ENSCVAG00000018617	-	98	85.185	ENSSTOG00000000243	-	91	91.713	Ictidomys_tridecemlineatus
ENSCVAG00000018617	-	98	85.185	ENSJJAG00000000102	-	78	92.228	Jaculus_jaculus
ENSCVAG00000018617	-	100	98.780	ENSKMAG00000019232	srsf1a	100	98.780	Kryptolebias_marmoratus
ENSCVAG00000018617	-	100	98.776	ENSLBEG00000020864	-	100	98.776	Labrus_bergylta
ENSCVAG00000018617	-	78	80.102	ENSLBEG00000015294	-	79	81.633	Labrus_bergylta
ENSCVAG00000018617	-	78	90.104	ENSLACG00000014160	srsf1a	72	90.104	Latimeria_chalumnae
ENSCVAG00000018617	-	78	89.062	ENSLOCG00000005994	srsf1a	78	92.188	Lepisosteus_oculatus
ENSCVAG00000018617	-	78	90.155	ENSLAFG00000025743	SRSF1	78	92.228	Loxodonta_africana
ENSCVAG00000018617	-	98	85.185	ENSMFAG00000040003	-	93	91.176	Macaca_fascicularis
ENSCVAG00000018617	-	99	81.967	ENSMMUG00000003260	-	93	89.583	Macaca_mulatta
ENSCVAG00000018617	-	98	85.185	ENSMMUG00000004725	SRSF1	93	91.176	Macaca_mulatta
ENSCVAG00000018617	-	98	85.185	ENSMNEG00000027680	-	93	91.176	Macaca_nemestrina
ENSCVAG00000018617	-	99	82.377	ENSMNEG00000015983	-	76	89.637	Macaca_nemestrina
ENSCVAG00000018617	-	98	82.988	ENSMLEG00000015243	-	76	87.958	Mandrillus_leucophaeus
ENSCVAG00000018617	-	78	90.155	ENSMLEG00000040509	SRSF1	78	92.228	Mandrillus_leucophaeus
ENSCVAG00000018617	-	78	90.052	ENSMAMG00000019687	-	78	90.052	Mastacembelus_armatus
ENSCVAG00000018617	-	100	99.592	ENSMAMG00000018454	-	100	99.592	Mastacembelus_armatus
ENSCVAG00000018617	-	78	92.188	ENSMAMG00000019691	-	80	91.667	Mastacembelus_armatus
ENSCVAG00000018617	-	98	85.185	ENSMAUG00000021845	Srsf1	78	92.228	Mesocricetus_auratus
ENSCVAG00000018617	-	98	85.185	ENSMICG00000013639	-	93	91.176	Microcebus_murinus
ENSCVAG00000018617	-	98	85.185	ENSMOCG00000001996	Srsf1	78	92.228	Microtus_ochrogaster
ENSCVAG00000018617	-	100	92.245	ENSMMOG00000014354	srsf1a	100	92.245	Mola_mola
ENSCVAG00000018617	-	73	90.608	ENSMODG00000014781	-	62	91.160	Monodelphis_domestica
ENSCVAG00000018617	-	79	98.964	ENSMALG00000017129	-	76	98.964	Monopterus_albus
ENSCVAG00000018617	-	81	78.283	ENSMALG00000007763	-	77	82.199	Monopterus_albus
ENSCVAG00000018617	-	98	85.185	MGP_CAROLIEiJ_G0016943	Srsf1	90	91.713	Mus_caroli
ENSCVAG00000018617	-	98	85.185	ENSMUSG00000018379	Srsf1	90	91.713	Mus_musculus
ENSCVAG00000018617	-	98	85.185	MGP_PahariEiJ_G0018074	Srsf1	74	97.436	Mus_pahari
ENSCVAG00000018617	-	98	85.185	MGP_SPRETEiJ_G0017790	Srsf1	90	91.713	Mus_spretus
ENSCVAG00000018617	-	78	90.155	ENSMPUG00000015369	SRSF1	78	92.228	Mustela_putorius_furo
ENSCVAG00000018617	-	80	87.817	ENSMLUG00000023995	-	77	87.435	Myotis_lucifugus
ENSCVAG00000018617	-	78	90.155	ENSMLUG00000011040	SRSF1	78	92.228	Myotis_lucifugus
ENSCVAG00000018617	-	78	90.155	ENSNGAG00000011395	Srsf1	78	92.228	Nannospalax_galili
ENSCVAG00000018617	-	99	74.590	ENSNBRG00000008041	srsf1b	78	77.487	Neolamprologus_brichardi
ENSCVAG00000018617	-	98	85.185	ENSNLEG00000008088	-	93	91.176	Nomascus_leucogenys
ENSCVAG00000018617	-	53	88.636	ENSOPRG00000001234	-	72	91.667	Ochotona_princeps
ENSCVAG00000018617	-	98	85.185	ENSODEG00000011481	-	78	92.228	Octodon_degus
ENSCVAG00000018617	-	79	91.282	ENSONIG00000004860	-	79	90.625	Oreochromis_niloticus
ENSCVAG00000018617	-	100	99.184	ENSONIG00000013160	-	99	99.184	Oreochromis_niloticus
ENSCVAG00000018617	-	99	64.634	ENSOCUG00000010894	-	75	72.487	Oryctolagus_cuniculus
ENSCVAG00000018617	-	100	99.592	ENSORLG00000004580	srsf1a	100	99.592	Oryzias_latipes
ENSCVAG00000018617	-	100	99.592	ENSORLG00020009456	srsf1a	100	99.592	Oryzias_latipes_hni
ENSCVAG00000018617	-	100	99.184	ENSORLG00015014384	srsf1a	100	99.184	Oryzias_latipes_hsok
ENSCVAG00000018617	-	92	97.788	ENSOMEG00000004106	srsf1a	93	97.788	Oryzias_melastigma
ENSCVAG00000018617	-	82	90.686	ENSOGAG00000025950	-	78	92.228	Otolemur_garnettii
ENSCVAG00000018617	-	78	89.005	ENSOARG00000008323	SRSF1	77	89.005	Ovis_aries
ENSCVAG00000018617	-	98	85.185	ENSPPAG00000043403	-	93	91.176	Pan_paniscus
ENSCVAG00000018617	-	98	85.185	ENSPPRG00000004238	-	90	91.713	Panthera_pardus
ENSCVAG00000018617	-	98	85.185	ENSPTRG00000049077	SRSF1	93	91.176	Pan_troglodytes
ENSCVAG00000018617	-	99	67.755	ENSPANG00000030275	-	75	68.041	Papio_anubis
ENSCVAG00000018617	-	98	85.185	ENSPANG00000022305	-	93	91.176	Papio_anubis
ENSCVAG00000018617	-	78	91.146	ENSPKIG00000007204	srsf1a	83	91.146	Paramormyrops_kingsleyae
ENSCVAG00000018617	-	78	89.062	ENSPKIG00000012857	srsf1b	78	92.188	Paramormyrops_kingsleyae
ENSCVAG00000018617	-	78	82.383	ENSPSIG00000009000	-	72	90.977	Pelodiscus_sinensis
ENSCVAG00000018617	-	100	96.825	ENSPMGG00000013112	-	100	96.825	Periophthalmus_magnuspinnatus
ENSCVAG00000018617	-	96	83.051	ENSPMGG00000005467	-	79	88.083	Periophthalmus_magnuspinnatus
ENSCVAG00000018617	-	98	85.185	ENSPEMG00000021416	Srsf1	78	92.228	Peromyscus_maniculatus_bairdii
ENSCVAG00000018617	-	78	90.206	ENSPCIG00000006076	-	78	92.268	Phascolarctos_cinereus
ENSCVAG00000018617	-	79	87.310	ENSPFOG00000018325	-	69	87.565	Poecilia_formosa
ENSCVAG00000018617	-	79	87.310	ENSPLAG00000008416	srsf1b	78	87.565	Poecilia_latipinna
ENSCVAG00000018617	-	79	87.310	ENSPMEG00000002388	-	78	87.565	Poecilia_mexicana
ENSCVAG00000018617	-	50	100.000	ENSPMEG00000014312	-	99	100.000	Poecilia_mexicana
ENSCVAG00000018617	-	50	100.000	ENSPMEG00000020607	-	99	100.000	Poecilia_mexicana
ENSCVAG00000018617	-	100	100.000	ENSPREG00000009667	srsf1a	100	100.000	Poecilia_reticulata
ENSCVAG00000018617	-	98	85.185	ENSPPYG00000008240	SRSF1	78	92.228	Pongo_abelii
ENSCVAG00000018617	-	78	90.155	ENSPCAG00000005199	SRSF1	78	92.228	Procavia_capensis
ENSCVAG00000018617	-	98	85.185	ENSPCOG00000023654	-	93	91.176	Propithecus_coquereli
ENSCVAG00000018617	-	79	72.222	ENSPCOG00000025736	-	93	72.775	Propithecus_coquereli
ENSCVAG00000018617	-	53	97.143	ENSPVAG00000000519	-	53	97.143	Pteropus_vampyrus
ENSCVAG00000018617	-	78	91.623	ENSPNAG00000014601	srsf1b	78	91.623	Pygocentrus_nattereri
ENSCVAG00000018617	-	95	84.052	ENSPNAG00000022241	srsf1a	78	91.099	Pygocentrus_nattereri
ENSCVAG00000018617	-	78	90.155	ENSRNOG00000050323	Srsf1	78	92.228	Rattus_norvegicus
ENSCVAG00000018617	-	98	85.185	ENSRBIG00000034445	-	93	91.176	Rhinopithecus_bieti
ENSCVAG00000018617	-	98	85.185	ENSRROG00000041506	-	93	91.176	Rhinopithecus_roxellana
ENSCVAG00000018617	-	98	85.185	ENSSBOG00000025377	-	93	91.176	Saimiri_boliviensis_boliviensis
ENSCVAG00000018617	-	78	90.206	ENSSHAG00000002552	-	78	92.268	Sarcophilus_harrisii
ENSCVAG00000018617	-	78	92.147	ENSSFOG00015004800	srsf1a	77	92.147	Scleropages_formosus
ENSCVAG00000018617	-	78	85.000	ENSSMAG00000009719	-	78	85.000	Scophthalmus_maximus
ENSCVAG00000018617	-	100	97.551	ENSSMAG00000007018	-	100	97.551	Scophthalmus_maximus
ENSCVAG00000018617	-	100	98.776	ENSSDUG00000011303	-	100	98.776	Seriola_dumerili
ENSCVAG00000018617	-	99	72.177	ENSSDUG00000003929	-	83	79.798	Seriola_dumerili
ENSCVAG00000018617	-	78	79.167	ENSSLDG00000016868	-	76	78.646	Seriola_lalandi_dorsalis
ENSCVAG00000018617	-	100	98.776	ENSSLDG00000010543	-	100	98.776	Seriola_lalandi_dorsalis
ENSCVAG00000018617	-	74	80.978	ENSSLDG00000016895	-	77	83.696	Seriola_lalandi_dorsalis
ENSCVAG00000018617	-	73	91.111	ENSSARG00000010949	-	62	92.222	Sorex_araneus
ENSCVAG00000018617	-	98	84.774	ENSSPUG00000000804	-	91	91.160	Sphenodon_punctatus
ENSCVAG00000018617	-	78	84.951	ENSSPAG00000014152	-	80	84.951	Stegastes_partitus
ENSCVAG00000018617	-	100	99.187	ENSSPAG00000022562	-	100	99.187	Stegastes_partitus
ENSCVAG00000018617	-	98	85.185	ENSSSCG00000017626	-	78	92.228	Sus_scrofa
ENSCVAG00000018617	-	53	87.970	ENSTGUG00000008416	-	72	90.977	Taeniopygia_guttata
ENSCVAG00000018617	-	100	98.776	ENSTRUG00000003691	srsf1a	100	98.776	Takifugu_rubripes
ENSCVAG00000018617	-	100	98.776	ENSTNIG00000016223	srsf1a	99	98.776	Tetraodon_nigroviridis
ENSCVAG00000018617	-	73	88.333	ENSTBEG00000015378	-	62	91.111	Tupaia_belangeri
ENSCVAG00000018617	-	53	88.636	ENSTTRG00000007310	SRSF1	72	91.667	Tursiops_truncatus
ENSCVAG00000018617	-	78	90.155	ENSUAMG00000009858	SRSF1	78	92.228	Ursus_americanus
ENSCVAG00000018617	-	98	85.185	ENSUMAG00000000455	-	76	92.228	Ursus_maritimus
ENSCVAG00000018617	-	78	89.637	ENSVPAG00000010094	SRSF1	78	91.710	Vicugna_pacos
ENSCVAG00000018617	-	98	85.185	ENSVVUG00000011882	-	76	92.228	Vulpes_vulpes
ENSCVAG00000018617	-	78	92.147	ENSXETG00000008954	srsf1	79	84.434	Xenopus_tropicalis
ENSCVAG00000018617	-	100	100.000	ENSXMAG00000011766	srsf1a	100	100.000	Xiphophorus_maculatus