EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000018623 (Gene tree)
Gene ID: 107102232
Gene Symbol: si:dkey-19e4.5
Alias: fb82g02|wu:fb82g02
Full Name: probable peptidyl-tRNA hydrolase 2
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 11189 bases
Position: chrKL653720.1:74999-86187
Accession: 107102232
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000015741	PTH2	PF01981.16	1.5e-34	1	1
ENSCVAP00000030224	PTH2	PF01981.16	1.7e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000031648	-	531	-	ENSCVAP00000015741	176 (aa)	-	-
ENSCVAT00000023925	-	3938	XM_015401447	ENSCVAP00000030224	184 (aa)	XP_015256933	UPI0007428CE3

Gene Model

Click here to download ENSCVAG00000018623's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000018623's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000018623	si:dkey-19e4.5	65	44.828	ENSCVAG00000016871	ptrh2	64	44.828

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000018623	si:dkey-19e4.5	100	91.848	ENSAPOG00000018297	si:dkey-19e4.5	100	91.848	Acanthochromis_polyacanthus
ENSCVAG00000018623	si:dkey-19e4.5	99	91.954	ENSACIG00000001450	si:dkey-19e4.5	99	93.143	Amphilophus_citrinellus
ENSCVAG00000018623	si:dkey-19e4.5	100	92.391	ENSAOCG00000000622	si:dkey-19e4.5	100	92.391	Amphiprion_ocellaris
ENSCVAG00000018623	si:dkey-19e4.5	100	92.391	ENSAPEG00000017071	si:dkey-19e4.5	100	92.391	Amphiprion_percula
ENSCVAG00000018623	si:dkey-19e4.5	100	85.870	ENSATEG00000003450	si:dkey-19e4.5	100	85.870	Anabas_testudineus
ENSCVAG00000018623	si:dkey-19e4.5	65	72.807	ENSACAG00000028513	-	99	72.807	Anolis_carolinensis
ENSCVAG00000018623	si:dkey-19e4.5	100	90.217	ENSACLG00000026360	si:dkey-19e4.5	100	90.217	Astatotilapia_calliptera
ENSCVAG00000018623	si:dkey-19e4.5	100	85.870	ENSAMXG00000016302	si:dkey-19e4.5	100	85.870	Astyanax_mexicanus
ENSCVAG00000018623	si:dkey-19e4.5	93	38.021	WBGene00016062	C24G6.8	60	38.342	Caenorhabditis_elegans
ENSCVAG00000018623	si:dkey-19e4.5	100	88.636	ENSDARG00000089886	si:dkey-19e4.5	100	88.068	Danio_rerio
ENSCVAG00000018623	si:dkey-19e4.5	100	86.631	ENSELUG00000012877	si:dkey-19e4.5	100	86.631	Esox_lucius
ENSCVAG00000018623	si:dkey-19e4.5	100	94.022	ENSFHEG00000017879	si:dkey-19e4.5	100	94.022	Fundulus_heteroclitus
ENSCVAG00000018623	si:dkey-19e4.5	76	91.045	ENSGMOG00000018615	si:dkey-19e4.5	100	91.045	Gadus_morhua
ENSCVAG00000018623	si:dkey-19e4.5	100	92.935	ENSGAFG00000008238	si:dkey-19e4.5	95	92.935	Gambusia_affinis
ENSCVAG00000018623	si:dkey-19e4.5	76	91.791	ENSGACG00000011371	si:dkey-19e4.5	100	91.791	Gasterosteus_aculeatus
ENSCVAG00000018623	si:dkey-19e4.5	100	90.217	ENSHBUG00000003898	si:dkey-19e4.5	100	90.217	Haplochromis_burtoni
ENSCVAG00000018623	si:dkey-19e4.5	97	85.965	ENSHCOG00000011175	si:dkey-19e4.5	100	82.162	Hippocampus_comes
ENSCVAG00000018623	si:dkey-19e4.5	100	85.227	ENSIPUG00000023250	si:dkey-19e4.5	100	85.227	Ictalurus_punctatus
ENSCVAG00000018623	si:dkey-19e4.5	100	85.326	ENSKMAG00000018142	si:dkey-19e4.5	100	85.326	Kryptolebias_marmoratus
ENSCVAG00000018623	si:dkey-19e4.5	100	90.217	ENSLBEG00000028494	si:dkey-19e4.5	97	93.491	Labrus_bergylta
ENSCVAG00000018623	si:dkey-19e4.5	100	65.341	ENSLACG00000003702	si:dkey-19e4.5	99	65.574	Latimeria_chalumnae
ENSCVAG00000018623	si:dkey-19e4.5	100	86.413	ENSLOCG00000013652	si:dkey-19e4.5	100	86.413	Lepisosteus_oculatus
ENSCVAG00000018623	si:dkey-19e4.5	99	90.286	ENSMAMG00000023661	si:dkey-19e4.5	99	90.857	Mastacembelus_armatus
ENSCVAG00000018623	si:dkey-19e4.5	100	90.217	ENSMZEG00005006058	si:dkey-19e4.5	100	90.217	Maylandia_zebra
ENSCVAG00000018623	si:dkey-19e4.5	100	87.500	ENSMMOG00000009678	si:dkey-19e4.5	100	87.500	Mola_mola
ENSCVAG00000018623	si:dkey-19e4.5	96	91.124	ENSMALG00000021083	si:dkey-19e4.5	97	91.124	Monopterus_albus
ENSCVAG00000018623	si:dkey-19e4.5	62	88.991	ENSNBRG00000018523	si:dkey-19e4.5	54	89.815	Neolamprologus_brichardi
ENSCVAG00000018623	si:dkey-19e4.5	100	86.413	ENSORLG00000010093	si:dkey-19e4.5	100	86.413	Oryzias_latipes
ENSCVAG00000018623	si:dkey-19e4.5	100	86.413	ENSORLG00020005940	si:dkey-19e4.5	100	86.413	Oryzias_latipes_hni
ENSCVAG00000018623	si:dkey-19e4.5	100	86.413	ENSORLG00015002105	si:dkey-19e4.5	100	86.413	Oryzias_latipes_hsok
ENSCVAG00000018623	si:dkey-19e4.5	100	86.413	ENSOMEG00000001615	si:dkey-19e4.5	100	86.413	Oryzias_melastigma
ENSCVAG00000018623	si:dkey-19e4.5	100	86.413	ENSPKIG00000018613	-	100	86.413	Paramormyrops_kingsleyae
ENSCVAG00000018623	si:dkey-19e4.5	98	79.651	ENSPKIG00000016249	-	100	77.174	Paramormyrops_kingsleyae
ENSCVAG00000018623	si:dkey-19e4.5	100	91.892	ENSPFOG00000011934	si:dkey-19e4.5	100	92.432	Poecilia_formosa
ENSCVAG00000018623	si:dkey-19e4.5	100	92.391	ENSPLAG00000012878	si:dkey-19e4.5	100	92.391	Poecilia_latipinna
ENSCVAG00000018623	si:dkey-19e4.5	100	91.892	ENSPMEG00000015916	si:dkey-19e4.5	100	92.432	Poecilia_mexicana
ENSCVAG00000018623	si:dkey-19e4.5	100	92.391	ENSPREG00000021009	si:dkey-19e4.5	100	92.391	Poecilia_reticulata
ENSCVAG00000018623	si:dkey-19e4.5	100	90.217	ENSPNYG00000007117	si:dkey-19e4.5	100	90.217	Pundamilia_nyererei
ENSCVAG00000018623	si:dkey-19e4.5	100	87.079	ENSPNAG00000009107	si:dkey-19e4.5	100	87.079	Pygocentrus_nattereri
ENSCVAG00000018623	si:dkey-19e4.5	100	86.957	ENSSFOG00015018940	-	85	86.957	Scleropages_formosus
ENSCVAG00000018623	si:dkey-19e4.5	99	84.000	ENSSFOG00015015536	-	99	82.682	Scleropages_formosus
ENSCVAG00000018623	si:dkey-19e4.5	100	90.761	ENSSMAG00000004082	si:dkey-19e4.5	100	90.761	Scophthalmus_maximus
ENSCVAG00000018623	si:dkey-19e4.5	99	92.000	ENSSDUG00000008513	si:dkey-19e4.5	100	90.761	Seriola_dumerili
ENSCVAG00000018623	si:dkey-19e4.5	97	79.532	ENSSLDG00000017403	si:dkey-19e4.5	96	80.117	Seriola_lalandi_dorsalis
ENSCVAG00000018623	si:dkey-19e4.5	74	68.462	ENSSPUG00000009492	-	84	68.462	Sphenodon_punctatus
ENSCVAG00000018623	si:dkey-19e4.5	100	92.935	ENSSPAG00000008798	si:dkey-19e4.5	100	92.935	Stegastes_partitus
ENSCVAG00000018623	si:dkey-19e4.5	100	85.870	ENSTRUG00000020025	si:dkey-19e4.5	100	85.870	Takifugu_rubripes
ENSCVAG00000018623	si:dkey-19e4.5	100	93.478	ENSXCOG00000002547	si:dkey-19e4.5	100	93.478	Xiphophorus_couchianus
ENSCVAG00000018623	si:dkey-19e4.5	100	93.478	ENSXMAG00000025389	si:dkey-19e4.5	100	93.478	Xiphophorus_maculatus