EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000018654 (Gene tree)
Gene ID: 107092535
Gene Symbol: -
Alias: -
Full Name: SUN domain-containing protein 1-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 35228 bases
Position: chrKL652884.1:685706-720933
Accession: 107092535
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000015771	MRP	PF09387.10	5.6e-11	1	1
ENSCVAP00000015817	MRP	PF09387.10	1.6e-10	1	1
ENSCVAP00000015761	MRP	PF09387.10	1.6e-10	1	1
ENSCVAP00000015789	MRP	PF09387.10	1.6e-10	1	1
ENSCVAP00000030248	MRP	PF09387.10	1.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000023957	-	6755	XM_015387064	ENSCVAP00000015789	1082 (aa)	XP_015242550	UPI0007426B96
ENSCVAT00000023941	-	6602	-	ENSCVAP00000015771	1031 (aa)	-	UPI0007429493
ENSCVAT00000023979	-	6497	-	ENSCVAP00000015817	1073 (aa)	-	-
ENSCVAT00000023995	-	6755	-	ENSCVAP00000030248	1082 (aa)	-	UPI0007426B96
ENSCVAT00000023924	-	6699	XM_015387061	ENSCVAP00000015761	1082 (aa)	XP_015242547	UPI0007426B96

Gene Model

Click here to download ENSCVAG00000018654's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000018654's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000018654	-	74	49.495	ENSG00000164828	SUN1	75	68.182	Homo_sapiens
ENSCVAG00000018654	-	99	73.766	ENSAPOG00000018289	sun1	98	76.741	Acanthochromis_polyacanthus
ENSCVAG00000018654	-	99	37.309	ENSAMEG00000005870	SUN1	83	49.367	Ailuropoda_melanoleuca
ENSCVAG00000018654	-	84	88.172	ENSACIG00000023138	sun1	100	88.172	Amphilophus_citrinellus
ENSCVAG00000018654	-	100	72.516	ENSAOCG00000017131	sun1	100	72.981	Amphiprion_ocellaris
ENSCVAG00000018654	-	94	72.439	ENSAPEG00000012687	sun1	100	76.323	Amphiprion_percula
ENSCVAG00000018654	-	99	72.985	ENSATEG00000024379	sun1	99	72.894	Anabas_testudineus
ENSCVAG00000018654	-	88	33.438	ENSACAG00000026971	-	89	35.294	Anolis_carolinensis
ENSCVAG00000018654	-	87	37.104	ENSANAG00000021749	SUN1	82	48.485	Aotus_nancymaae
ENSCVAG00000018654	-	99	75.430	ENSACLG00000027807	sun1	99	78.860	Astatotilapia_calliptera
ENSCVAG00000018654	-	97	73.699	ENSACLG00000009247	-	99	77.312	Astatotilapia_calliptera
ENSCVAG00000018654	-	87	53.496	ENSAMXG00000008936	-	99	53.008	Astyanax_mexicanus
ENSCVAG00000018654	-	99	37.105	ENSBTAG00000046498	SUN1	79	55.488	Bos_taurus
ENSCVAG00000018654	-	99	35.660	ENSCJAG00000015835	SUN1	84	48.737	Callithrix_jacchus
ENSCVAG00000018654	-	99	37.595	ENSCAFG00000011273	SUN1	93	45.322	Canis_familiaris
ENSCVAG00000018654	-	88	40.466	ENSCAFG00020020501	SUN1	91	45.322	Canis_lupus_dingo
ENSCVAG00000018654	-	81	36.209	ENSCHIG00000013368	SUN1	91	44.075	Capra_hircus
ENSCVAG00000018654	-	87	37.654	ENSTSYG00000001204	SUN1	60	74.138	Carlito_syrichta
ENSCVAG00000018654	-	72	51.466	ENSCAPG00000012385	SUN1	94	43.365	Cavia_aperea
ENSCVAG00000018654	-	99	36.695	ENSCPOG00000002301	SUN1	87	45.726	Cavia_porcellus
ENSCVAG00000018654	-	91	39.565	ENSCCAG00000021107	SUN1	82	47.980	Cebus_capucinus
ENSCVAG00000018654	-	83	50.758	ENSCATG00000011433	SUN1	83	50.758	Cercocebus_atys
ENSCVAG00000018654	-	99	35.912	ENSCLAG00000013811	SUN1	82	46.368	Chinchilla_lanigera
ENSCVAG00000018654	-	83	50.000	ENSCSAG00000017541	SUN1	84	50.000	Chlorocebus_sabaeus
ENSCVAG00000018654	-	65	52.542	ENSCHOG00000009029	SUN1	76	52.542	Choloepus_hoffmanni
ENSCVAG00000018654	-	99	40.390	ENSCPBG00000020536	SUN1	93	45.233	Chrysemys_picta_bellii
ENSCVAG00000018654	-	74	50.000	ENSCANG00000028126	SUN1	79	56.250	Colobus_angolensis_palliatus
ENSCVAG00000018654	-	99	37.879	ENSCGRG00001019963	Sun1	89	45.572	Cricetulus_griseus_chok1gshd
ENSCVAG00000018654	-	99	37.500	ENSCGRG00000009140	Sun1	89	45.572	Cricetulus_griseus_crigri
ENSCVAG00000018654	-	100	68.612	ENSCSEG00000014129	sun1	100	68.517	Cynoglossus_semilaevis
ENSCVAG00000018654	-	99	50.418	ENSDARG00000055350	sun1	99	49.371	Danio_rerio
ENSCVAG00000018654	-	99	37.853	ENSDNOG00000004960	SUN1	93	46.735	Dasypus_novemcinctus
ENSCVAG00000018654	-	84	41.262	ENSDORG00000002734	Sun1	90	41.071	Dipodomys_ordii
ENSCVAG00000018654	-	60	52.000	ENSETEG00000004796	-	71	53.488	Echinops_telfairi
ENSCVAG00000018654	-	99	37.098	ENSEASG00005020392	SUN1	99	40.440	Equus_asinus_asinus
ENSCVAG00000018654	-	99	37.184	ENSECAG00000017201	SUN1	87	57.732	Equus_caballus
ENSCVAG00000018654	-	77	49.550	ENSEEUG00000012695	SUN1	76	55.435	Erinaceus_europaeus
ENSCVAG00000018654	-	99	60.476	ENSELUG00000016540	-	99	59.943	Esox_lucius
ENSCVAG00000018654	-	87	55.574	ENSELUG00000005569	-	99	54.327	Esox_lucius
ENSCVAG00000018654	-	87	40.725	ENSFCAG00000005256	SUN1	80	35.965	Felis_catus
ENSCVAG00000018654	-	99	39.029	ENSFALG00000013951	SUN1	76	45.547	Ficedula_albicollis
ENSCVAG00000018654	-	99	37.154	ENSFDAG00000019237	SUN1	90	45.279	Fukomys_damarensis
ENSCVAG00000018654	-	99	86.550	ENSFHEG00000013817	sun1	100	87.524	Fundulus_heteroclitus
ENSCVAG00000018654	-	99	39.376	ENSGALG00000003781	SUN1	93	45.030	Gallus_gallus
ENSCVAG00000018654	-	100	78.519	ENSGAFG00000020306	sun1	100	78.611	Gambusia_affinis
ENSCVAG00000018654	-	91	70.785	ENSGACG00000011433	sun1	100	63.723	Gasterosteus_aculeatus
ENSCVAG00000018654	-	99	40.098	ENSGAGG00000003718	SUN1	93	44.422	Gopherus_agassizii
ENSCVAG00000018654	-	71	64.865	ENSGGOG00000012630	SUN1	77	64.865	Gorilla_gorilla
ENSCVAG00000018654	-	99	37.274	ENSHGLG00000009193	SUN1	87	47.126	Heterocephalus_glaber_female
ENSCVAG00000018654	-	99	37.023	ENSHGLG00100002847	SUN1	84	50.380	Heterocephalus_glaber_male
ENSCVAG00000018654	-	99	37.110	ENSSTOG00000003895	SUN1	96	43.689	Ictidomys_tridecemlineatus
ENSCVAG00000018654	-	99	36.544	ENSJJAG00000022626	Sun1	93	43.738	Jaculus_jaculus
ENSCVAG00000018654	-	100	78.295	ENSKMAG00000018448	-	100	78.488	Kryptolebias_marmoratus
ENSCVAG00000018654	-	92	65.675	ENSLBEG00000005508	sun1	96	65.675	Labrus_bergylta
ENSCVAG00000018654	-	99	40.936	ENSLACG00000014915	SUN1	93	47.773	Latimeria_chalumnae
ENSCVAG00000018654	-	99	47.184	ENSLOCG00000001625	sun1	78	55.444	Lepisosteus_oculatus
ENSCVAG00000018654	-	83	51.282	ENSMFAG00000003239	SUN1	82	51.282	Macaca_fascicularis
ENSCVAG00000018654	-	83	50.758	ENSMMUG00000017056	SUN1	83	50.758	Macaca_mulatta
ENSCVAG00000018654	-	86	50.758	ENSMNEG00000038196	SUN1	84	50.758	Macaca_nemestrina
ENSCVAG00000018654	-	74	50.758	ENSMLEG00000031714	SUN1	82	50.758	Mandrillus_leucophaeus
ENSCVAG00000018654	-	100	70.958	ENSMAMG00000023352	sun1	100	71.152	Mastacembelus_armatus
ENSCVAG00000018654	-	99	74.401	ENSMZEG00005004086	sun1	99	78.999	Maylandia_zebra
ENSCVAG00000018654	-	99	38.651	ENSMGAG00000002073	SUN1	93	44.869	Meleagris_gallopavo
ENSCVAG00000018654	-	99	35.835	ENSMAUG00000016426	Sun1	89	44.924	Mesocricetus_auratus
ENSCVAG00000018654	-	98	39.045	ENSMOCG00000008565	Sun1	94	34.799	Microtus_ochrogaster
ENSCVAG00000018654	-	99	58.507	ENSMMOG00000013925	sun1	97	73.465	Mola_mola
ENSCVAG00000018654	-	99	39.905	ENSMODG00000008621	SUN1	92	45.868	Monodelphis_domestica
ENSCVAG00000018654	-	100	70.147	ENSMALG00000018615	sun1	100	70.238	Monopterus_albus
ENSCVAG00000018654	-	97	39.429	MGP_CAROLIEiJ_G0027926	Sun1	90	46.220	Mus_caroli
ENSCVAG00000018654	-	99	36.260	ENSMUSG00000036817	Sun1	90	45.788	Mus_musculus
ENSCVAG00000018654	-	99	35.939	MGP_PahariEiJ_G0024498	Sun1	90	45.474	Mus_pahari
ENSCVAG00000018654	-	99	36.260	MGP_SPRETEiJ_G0028930	Sun1	90	45.788	Mus_spretus
ENSCVAG00000018654	-	99	37.393	ENSMPUG00000017885	SUN1	92	44.928	Mustela_putorius_furo
ENSCVAG00000018654	-	99	35.721	ENSMLUG00000002094	SUN1	84	49.747	Myotis_lucifugus
ENSCVAG00000018654	-	97	39.260	ENSNGAG00000012274	Sun1	86	47.489	Nannospalax_galili
ENSCVAG00000018654	-	76	84.848	ENSNBRG00000000767	sun1	98	84.848	Neolamprologus_brichardi
ENSCVAG00000018654	-	83	49.495	ENSNLEG00000008323	SUN1	81	56.250	Nomascus_leucogenys
ENSCVAG00000018654	-	97	34.779	ENSODEG00000010273	SUN1	89	44.828	Octodon_degus
ENSCVAG00000018654	-	99	66.192	ENSONIG00000017115	sun1	99	66.477	Oreochromis_niloticus
ENSCVAG00000018654	-	99	39.619	ENSOANG00000006996	-	92	44.628	Ornithorhynchus_anatinus
ENSCVAG00000018654	-	100	68.785	ENSORLG00000008524	-	100	68.969	Oryzias_latipes
ENSCVAG00000018654	-	100	70.077	ENSORLG00020019407	-	100	72.740	Oryzias_latipes_hni
ENSCVAG00000018654	-	77	82.418	ENSORLG00015008935	sun1	96	82.418	Oryzias_latipes_hsok
ENSCVAG00000018654	-	99	68.549	ENSOMEG00000010585	-	100	71.409	Oryzias_melastigma
ENSCVAG00000018654	-	99	36.698	ENSOGAG00000011509	SUN1	84	49.367	Otolemur_garnettii
ENSCVAG00000018654	-	72	75.862	ENSOARG00000005987	SUN1	61	65.278	Ovis_aries
ENSCVAG00000018654	-	83	49.495	ENSPPAG00000041385	SUN1	84	49.495	Pan_paniscus
ENSCVAG00000018654	-	87	40.922	ENSPPRG00000007333	SUN1	78	50.127	Panthera_pardus
ENSCVAG00000018654	-	90	41.308	ENSPTIG00000012353	SUN1	85	45.475	Panthera_tigris_altaica
ENSCVAG00000018654	-	84	50.000	ENSPTRG00000018833	SUN1	84	50.000	Pan_troglodytes
ENSCVAG00000018654	-	83	50.000	ENSPTRG00000047557	-	81	56.250	Pan_troglodytes
ENSCVAG00000018654	-	83	50.758	ENSPANG00000009862	SUN1	84	50.758	Papio_anubis
ENSCVAG00000018654	-	98	38.973	ENSPKIG00000003418	-	88	50.806	Paramormyrops_kingsleyae
ENSCVAG00000018654	-	92	55.791	ENSPKIG00000005653	-	100	54.531	Paramormyrops_kingsleyae
ENSCVAG00000018654	-	99	40.191	ENSPSIG00000004554	SUN1	92	45.868	Pelodiscus_sinensis
ENSCVAG00000018654	-	99	35.741	ENSPEMG00000023465	Sun1	100	36.154	Peromyscus_maniculatus_bairdii
ENSCVAG00000018654	-	83	50.000	ENSPCIG00000013584	SUN1	91	49.746	Phascolarctos_cinereus
ENSCVAG00000018654	-	100	77.727	ENSPFOG00000003382	sun1	100	78.093	Poecilia_formosa
ENSCVAG00000018654	-	100	77.542	ENSPLAG00000016432	sun1	100	78.274	Poecilia_latipinna
ENSCVAG00000018654	-	100	77.727	ENSPMEG00000014593	sun1	100	78.093	Poecilia_mexicana
ENSCVAG00000018654	-	100	76.712	ENSPREG00000007121	sun1	100	77.595	Poecilia_reticulata
ENSCVAG00000018654	-	84	48.990	ENSPPYG00000017288	-	80	48.990	Pongo_abelii
ENSCVAG00000018654	-	58	65.625	ENSPCAG00000002003	SUN1	69	42.334	Procavia_capensis
ENSCVAG00000018654	-	99	74.472	ENSPNYG00000018927	sun1	99	79.277	Pundamilia_nyererei
ENSCVAG00000018654	-	50	62.500	ENSPNAG00000015401	-	85	67.808	Pygocentrus_nattereri
ENSCVAG00000018654	-	99	37.154	ENSRNOG00000001299	Sun1	86	45.356	Rattus_norvegicus
ENSCVAG00000018654	-	83	49.747	ENSRBIG00000044381	SUN1	79	56.250	Rhinopithecus_bieti
ENSCVAG00000018654	-	83	50.000	ENSRROG00000040182	SUN1	79	56.250	Rhinopithecus_roxellana
ENSCVAG00000018654	-	84	48.990	ENSSBOG00000004895	SUN1	84	48.990	Saimiri_boliviensis_boliviensis
ENSCVAG00000018654	-	87	46.485	ENSSHAG00000012971	SUN1	90	49.490	Sarcophilus_harrisii
ENSCVAG00000018654	-	99	49.817	ENSSFOG00015009139	-	99	54.664	Scleropages_formosus
ENSCVAG00000018654	-	100	72.622	ENSSMAG00000015746	sun1	100	72.719	Scophthalmus_maximus
ENSCVAG00000018654	-	99	75.000	ENSSDUG00000010161	sun1	99	75.287	Seriola_dumerili
ENSCVAG00000018654	-	100	73.718	ENSSLDG00000022393	sun1	100	73.901	Seriola_lalandi_dorsalis
ENSCVAG00000018654	-	55	84.000	ENSSARG00000004450	-	61	50.378	Sorex_araneus
ENSCVAG00000018654	-	99	38.559	ENSSPUG00000001497	SUN1	92	44.008	Sphenodon_punctatus
ENSCVAG00000018654	-	100	74.283	ENSSPAG00000008966	sun1	99	74.678	Stegastes_partitus
ENSCVAG00000018654	-	92	33.916	ENSSSCG00000007544	SUN1	82	45.181	Sus_scrofa
ENSCVAG00000018654	-	99	65.116	ENSTRUG00000015866	sun1	99	65.242	Takifugu_rubripes
ENSCVAG00000018654	-	99	60.718	ENSTNIG00000017972	sun1	99	61.808	Tetraodon_nigroviridis
ENSCVAG00000018654	-	68	56.083	ENSTBEG00000008267	SUN1	76	56.083	Tupaia_belangeri
ENSCVAG00000018654	-	90	40.616	ENSUAMG00000012344	SUN1	80	51.269	Ursus_americanus
ENSCVAG00000018654	-	99	36.976	ENSUMAG00000005940	SUN1	92	47.357	Ursus_maritimus
ENSCVAG00000018654	-	96	35.521	ENSVVUG00000028925	SUN1	91	56.250	Vulpes_vulpes
ENSCVAG00000018654	-	99	35.086	ENSXETG00000021642	sun1	79	50.610	Xenopus_tropicalis
ENSCVAG00000018654	-	100	79.556	ENSXMAG00000000898	sun1	100	79.749	Xiphophorus_maculatus