EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000018699 (Gene tree)
Gene ID: 107095922
Gene Symbol: rbm34
Alias: zgc:92062
Full Name: RNA binding motif protein 34
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 18163 bases
Position: chrKL653085.1:31731-49893
Accession: 107095922
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000015845	RRM_1	PF00076.22	8.2e-27	1	2
ENSCVAP00000015845	RRM_1	PF00076.22	8.2e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000024041	-	1601	XM_015392293	ENSCVAP00000015845	406 (aa)	XP_015247779	UPI0007425171

Gene Model

Click here to download ENSCVAG00000018699's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000018699's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000018699	rbm34	86	41.081	ENSG00000188739	RBM34	85	41.081	Homo_sapiens
ENSCVAG00000018699	rbm34	90	60.322	ENSAPOG00000004027	rbm34	92	60.847	Acanthochromis_polyacanthus
ENSCVAG00000018699	rbm34	92	52.713	ENSACIG00000014842	rbm34	85	52.713	Amphilophus_citrinellus
ENSCVAG00000018699	rbm34	94	58.293	ENSAOCG00000006146	rbm34	95	59.069	Amphiprion_ocellaris
ENSCVAG00000018699	rbm34	94	57.895	ENSAPEG00000022105	rbm34	95	57.518	Amphiprion_percula
ENSCVAG00000018699	rbm34	94	55.000	ENSATEG00000016567	rbm34	95	55.000	Anabas_testudineus
ENSCVAG00000018699	rbm34	72	46.026	ENSAPLG00000004344	RBM34	96	46.026	Anas_platyrhynchos
ENSCVAG00000018699	rbm34	79	40.580	ENSACAG00000001253	RBM34	78	42.566	Anolis_carolinensis
ENSCVAG00000018699	rbm34	86	38.614	ENSANAG00000029971	RBM34	89	39.803	Aotus_nancymaae
ENSCVAG00000018699	rbm34	94	57.673	ENSACLG00000026337	rbm34	95	57.673	Astatotilapia_calliptera
ENSCVAG00000018699	rbm34	91	58.056	ENSACLG00000018471	rbm34	80	58.056	Astatotilapia_calliptera
ENSCVAG00000018699	rbm34	90	44.304	ENSAMXG00000021328	rbm34	90	44.304	Astyanax_mexicanus
ENSCVAG00000018699	rbm34	80	42.197	ENSCJAG00000018125	RBM34	80	43.143	Callithrix_jacchus
ENSCVAG00000018699	rbm34	87	40.642	ENSCAFG00000011507	RBM34	93	39.514	Canis_familiaris
ENSCVAG00000018699	rbm34	86	42.257	ENSTSYG00000009942	RBM34	86	42.257	Carlito_syrichta
ENSCVAG00000018699	rbm34	65	38.095	ENSCAPG00000015346	RBM34	74	38.095	Cavia_aperea
ENSCVAG00000018699	rbm34	80	40.922	ENSCPOG00000015213	RBM34	79	41.210	Cavia_porcellus
ENSCVAG00000018699	rbm34	88	41.425	ENSCCAG00000025584	RBM34	89	41.519	Cebus_capucinus
ENSCVAG00000018699	rbm34	90	40.704	ENSCATG00000031771	RBM34	94	40.436	Cercocebus_atys
ENSCVAG00000018699	rbm34	93	40.150	ENSCLAG00000003464	RBM34	93	40.302	Chinchilla_lanigera
ENSCVAG00000018699	rbm34	92	41.206	ENSCSAG00000010079	RBM34	93	40.920	Chlorocebus_sabaeus
ENSCVAG00000018699	rbm34	91	42.929	ENSCPBG00000005460	RBM34	82	42.674	Chrysemys_picta_bellii
ENSCVAG00000018699	rbm34	93	40.097	ENSCANG00000009561	RBM34	93	40.097	Colobus_angolensis_palliatus
ENSCVAG00000018699	rbm34	86	31.842	ENSCGRG00001018721	Rbm34	89	40.784	Cricetulus_griseus_chok1gshd
ENSCVAG00000018699	rbm34	86	36.053	ENSCGRG00000014051	Rbm34	86	37.166	Cricetulus_griseus_crigri
ENSCVAG00000018699	rbm34	95	52.683	ENSCSEG00000000993	rbm34	94	54.146	Cynoglossus_semilaevis
ENSCVAG00000018699	rbm34	95	49.751	ENSDARG00000101877	rbm34	95	53.265	Danio_rerio
ENSCVAG00000018699	rbm34	90	42.051	ENSDNOG00000044740	RBM34	88	42.051	Dasypus_novemcinctus
ENSCVAG00000018699	rbm34	53	52.995	ENSDORG00000006420	Rbm34	70	52.995	Dipodomys_ordii
ENSCVAG00000018699	rbm34	54	51.131	ENSEBUG00000012070	rbm34	62	52.093	Eptatretus_burgeri
ENSCVAG00000018699	rbm34	80	33.333	ENSEEUG00000012760	RBM34	79	33.333	Erinaceus_europaeus
ENSCVAG00000018699	rbm34	92	47.727	ENSELUG00000015682	rbm34	73	52.553	Esox_lucius
ENSCVAG00000018699	rbm34	86	40.526	ENSFCAG00000001852	RBM34	90	39.750	Felis_catus
ENSCVAG00000018699	rbm34	72	68.456	ENSFHEG00000010140	rbm34	99	68.456	Fundulus_heteroclitus
ENSCVAG00000018699	rbm34	56	54.978	ENSGMOG00000011683	rbm34	90	55.844	Gadus_morhua
ENSCVAG00000018699	rbm34	52	42.174	ENSGALG00000029915	RBM34	77	42.174	Gallus_gallus
ENSCVAG00000018699	rbm34	100	65.217	ENSGAFG00000017798	rbm34	100	65.217	Gambusia_affinis
ENSCVAG00000018699	rbm34	94	49.751	ENSGACG00000001040	-	95	49.758	Gasterosteus_aculeatus
ENSCVAG00000018699	rbm34	91	42.239	ENSGAGG00000020598	RBM34	80	43.353	Gopherus_agassizii
ENSCVAG00000018699	rbm34	90	41.538	ENSGGOG00000007924	RBM34	88	41.538	Gorilla_gorilla
ENSCVAG00000018699	rbm34	94	57.921	ENSHBUG00000015508	rbm34	95	57.921	Haplochromis_burtoni
ENSCVAG00000018699	rbm34	79	40.237	ENSHGLG00000016495	RBM34	79	39.941	Heterocephalus_glaber_female
ENSCVAG00000018699	rbm34	79	40.237	ENSHGLG00100014678	RBM34	79	39.941	Heterocephalus_glaber_male
ENSCVAG00000018699	rbm34	51	56.667	ENSHCOG00000010393	rbm34	66	50.179	Hippocampus_comes
ENSCVAG00000018699	rbm34	78	51.863	ENSIPUG00000021952	rbm34	91	46.782	Ictalurus_punctatus
ENSCVAG00000018699	rbm34	79	43.149	ENSSTOG00000002792	RBM34	79	43.149	Ictidomys_tridecemlineatus
ENSCVAG00000018699	rbm34	65	48.120	ENSJJAG00000021295	Rbm34	76	50.644	Jaculus_jaculus
ENSCVAG00000018699	rbm34	94	54.839	ENSKMAG00000007790	rbm34	96	55.335	Kryptolebias_marmoratus
ENSCVAG00000018699	rbm34	91	54.569	ENSLBEG00000022530	-	93	55.696	Labrus_bergylta
ENSCVAG00000018699	rbm34	70	53.000	ENSLBEG00000028305	rbm34	92	46.512	Labrus_bergylta
ENSCVAG00000018699	rbm34	89	40.874	ENSLACG00000013628	RBM34	92	40.441	Latimeria_chalumnae
ENSCVAG00000018699	rbm34	83	46.629	ENSLOCG00000015902	rbm34	80	46.629	Lepisosteus_oculatus
ENSCVAG00000018699	rbm34	88	38.346	ENSLAFG00000014289	RBM34	89	38.987	Loxodonta_africana
ENSCVAG00000018699	rbm34	88	41.192	ENSMFAG00000038522	RBM34	93	40.898	Macaca_fascicularis
ENSCVAG00000018699	rbm34	93	41.007	ENSMMUG00000039424	RBM34	98	41.162	Macaca_mulatta
ENSCVAG00000018699	rbm34	88	41.192	ENSMNEG00000040149	RBM34	93	40.898	Macaca_nemestrina
ENSCVAG00000018699	rbm34	94	56.683	ENSMAMG00000018828	rbm34	95	57.531	Mastacembelus_armatus
ENSCVAG00000018699	rbm34	56	59.514	ENSMZEG00005010091	-	86	59.514	Maylandia_zebra
ENSCVAG00000018699	rbm34	94	58.168	ENSMZEG00005021586	rbm34	95	58.168	Maylandia_zebra
ENSCVAG00000018699	rbm34	93	44.110	ENSMGAG00000011921	RBM34	95	43.979	Meleagris_gallopavo
ENSCVAG00000018699	rbm34	82	38.551	ENSMICG00000038704	-	81	39.601	Microcebus_murinus
ENSCVAG00000018699	rbm34	90	41.192	ENSMOCG00000013550	Rbm34	88	41.192	Microtus_ochrogaster
ENSCVAG00000018699	rbm34	79	60.245	ENSMMOG00000018675	rbm34	80	60.588	Mola_mola
ENSCVAG00000018699	rbm34	90	36.829	ENSMODG00000008436	RBM34	93	36.320	Monodelphis_domestica
ENSCVAG00000018699	rbm34	90	54.255	ENSMALG00000007816	rbm34	93	53.989	Monopterus_albus
ENSCVAG00000018699	rbm34	90	41.688	MGP_CAROLIEiJ_G0031732	Rbm34	88	41.985	Mus_caroli
ENSCVAG00000018699	rbm34	90	41.071	ENSMUSG00000033931	Rbm34	88	41.772	Mus_musculus
ENSCVAG00000018699	rbm34	90	42.228	MGP_PahariEiJ_G0023329	Rbm34	88	42.526	Mus_pahari
ENSCVAG00000018699	rbm34	90	40.665	MGP_SPRETEiJ_G0032849	Rbm34	88	42.025	Mus_spretus
ENSCVAG00000018699	rbm34	81	41.210	ENSMPUG00000002849	RBM34	80	41.210	Mustela_putorius_furo
ENSCVAG00000018699	rbm34	51	52.885	ENSMLUG00000016224	RBM34	80	41.341	Myotis_lucifugus
ENSCVAG00000018699	rbm34	83	41.341	ENSNGAG00000010712	Rbm34	84	41.061	Nannospalax_galili
ENSCVAG00000018699	rbm34	91	57.662	ENSNBRG00000010975	rbm34	92	57.662	Neolamprologus_brichardi
ENSCVAG00000018699	rbm34	92	40.404	ENSNLEG00000002610	RBM34	90	40.404	Nomascus_leucogenys
ENSCVAG00000018699	rbm34	61	42.915	ENSMEUG00000005465	-	77	42.915	Notamacropus_eugenii
ENSCVAG00000018699	rbm34	57	43.038	ENSOPRG00000013930	RBM34	86	36.170	Ochotona_princeps
ENSCVAG00000018699	rbm34	83	41.011	ENSODEG00000006130	RBM34	91	41.127	Octodon_degus
ENSCVAG00000018699	rbm34	94	58.105	ENSONIG00000018121	rbm34	93	58.291	Oreochromis_niloticus
ENSCVAG00000018699	rbm34	80	43.266	ENSOANG00000001206	RBM34	81	43.266	Ornithorhynchus_anatinus
ENSCVAG00000018699	rbm34	86	41.253	ENSOCUG00000009173	RBM34	87	41.253	Oryctolagus_cuniculus
ENSCVAG00000018699	rbm34	94	54.500	ENSORLG00000001221	rbm34	95	55.250	Oryzias_latipes
ENSCVAG00000018699	rbm34	94	54.115	ENSORLG00020016678	rbm34	95	54.863	Oryzias_latipes_hni
ENSCVAG00000018699	rbm34	94	54.250	ENSORLG00015016039	rbm34	95	54.250	Oryzias_latipes_hsok
ENSCVAG00000018699	rbm34	94	54.020	ENSOMEG00000007902	rbm34	95	54.887	Oryzias_melastigma
ENSCVAG00000018699	rbm34	84	39.108	ENSOGAG00000012470	RBM34	87	38.860	Otolemur_garnettii
ENSCVAG00000018699	rbm34	86	41.129	ENSPPAG00000030692	RBM34	85	41.129	Pan_paniscus
ENSCVAG00000018699	rbm34	89	40.779	ENSPPRG00000013597	RBM34	87	40.779	Panthera_pardus
ENSCVAG00000018699	rbm34	89	40.519	ENSPTIG00000011612	RBM34	87	40.519	Panthera_tigris_altaica
ENSCVAG00000018699	rbm34	86	41.351	ENSPTRG00000048646	-	85	41.351	Pan_troglodytes
ENSCVAG00000018699	rbm34	86	41.351	ENSPTRG00000032432	RBM34	85	41.351	Pan_troglodytes
ENSCVAG00000018699	rbm34	89	41.775	ENSPANG00000010411	RBM34	93	41.162	Papio_anubis
ENSCVAG00000018699	rbm34	94	44.938	ENSPKIG00000009284	rbm34	94	45.185	Paramormyrops_kingsleyae
ENSCVAG00000018699	rbm34	95	40.887	ENSPSIG00000011370	RBM34	86	41.710	Pelodiscus_sinensis
ENSCVAG00000018699	rbm34	71	50.853	ENSPMGG00000001183	rbm34	94	43.784	Periophthalmus_magnuspinnatus
ENSCVAG00000018699	rbm34	90	41.146	ENSPEMG00000000265	Rbm34	88	41.451	Peromyscus_maniculatus_bairdii
ENSCVAG00000018699	rbm34	72	45.483	ENSPMAG00000001602	rbm34	84	45.223	Petromyzon_marinus
ENSCVAG00000018699	rbm34	92	37.221	ENSPCIG00000029736	-	76	37.221	Phascolarctos_cinereus
ENSCVAG00000018699	rbm34	100	66.024	ENSPFOG00000009829	-	100	66.024	Poecilia_formosa
ENSCVAG00000018699	rbm34	94	66.582	ENSPLAG00000018385	-	94	66.582	Poecilia_latipinna
ENSCVAG00000018699	rbm34	98	57.568	ENSPMEG00000014440	-	99	57.568	Poecilia_mexicana
ENSCVAG00000018699	rbm34	94	65.897	ENSPREG00000023227	rbm34	94	65.816	Poecilia_reticulata
ENSCVAG00000018699	rbm34	92	41.058	ENSPPYG00000029513	RBM34	90	41.058	Pongo_abelii
ENSCVAG00000018699	rbm34	82	39.489	ENSPCOG00000018448	RBM34	84	40.323	Propithecus_coquereli
ENSCVAG00000018699	rbm34	78	43.452	ENSPVAG00000015158	RBM34	88	42.188	Pteropus_vampyrus
ENSCVAG00000018699	rbm34	94	57.921	ENSPNYG00000004970	rbm34	95	57.921	Pundamilia_nyererei
ENSCVAG00000018699	rbm34	92	46.154	ENSPNAG00000002639	rbm34	91	47.222	Pygocentrus_nattereri
ENSCVAG00000018699	rbm34	86	41.444	ENSRNOG00000020004	Rbm34	87	41.755	Rattus_norvegicus
ENSCVAG00000018699	rbm34	89	41.514	ENSRBIG00000032900	RBM34	90	41.206	Rhinopithecus_bieti
ENSCVAG00000018699	rbm34	89	41.514	ENSRROG00000039131	RBM34	90	41.206	Rhinopithecus_roxellana
ENSCVAG00000018699	rbm34	92	37.811	ENSSHAG00000015812	RBM34	90	38.557	Sarcophilus_harrisii
ENSCVAG00000018699	rbm34	94	45.297	ENSSFOG00015000148	rbm34	95	45.545	Scleropages_formosus
ENSCVAG00000018699	rbm34	91	57.506	ENSSMAG00000020955	rbm34	91	57.506	Scophthalmus_maximus
ENSCVAG00000018699	rbm34	94	56.618	ENSSDUG00000019237	rbm34	95	56.863	Seriola_dumerili
ENSCVAG00000018699	rbm34	94	54.074	ENSSLDG00000000796	rbm34	95	54.321	Seriola_lalandi_dorsalis
ENSCVAG00000018699	rbm34	96	39.467	ENSSPUG00000015430	RBM34	80	42.609	Sphenodon_punctatus
ENSCVAG00000018699	rbm34	92	60.358	ENSSPAG00000010174	rbm34	93	60.358	Stegastes_partitus
ENSCVAG00000018699	rbm34	94	50.382	ENSTRUG00000011172	rbm34	88	58.046	Takifugu_rubripes
ENSCVAG00000018699	rbm34	92	50.000	ENSTNIG00000001302	-	93	53.687	Tetraodon_nigroviridis
ENSCVAG00000018699	rbm34	80	43.939	ENSXETG00000023721	rbm34	87	40.909	Xenopus_tropicalis
ENSCVAG00000018699	rbm34	98	55.941	ENSXCOG00000011190	RBM34	99	56.296	Xiphophorus_couchianus
ENSCVAG00000018699	rbm34	100	66.667	ENSXMAG00000029852	rbm34	100	66.667	Xiphophorus_maculatus