EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000018717 (Gene tree)
Gene ID: 107098175
Gene Symbol: rnaseh1
Alias: zgc:91971
Full Name: ribonuclease H1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 5545 bases
Position: chrKL653252.1:99819-105363
Accession: 107098175
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000015846	RNase_H	PF00075.24	2.1e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000031685	-	1555	XM_015395686	ENSCVAP00000015846	302 (aa)	XP_015251172	UPI0007429F83

Gene Model

Click here to download ENSCVAG00000018717's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000018717's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000018717	rnaseh1	87	55.682	ENSG00000171865	RNASEH1	89	55.682	Homo_sapiens
ENSCVAG00000018717	rnaseh1	99	73.000	ENSAPOG00000000412	rnaseh1	99	73.000	Acanthochromis_polyacanthus
ENSCVAG00000018717	rnaseh1	87	56.015	ENSAMEG00000018433	RNASEH1	89	56.015	Ailuropoda_melanoleuca
ENSCVAG00000018717	rnaseh1	98	77.288	ENSACIG00000014666	rnaseh1	97	77.288	Amphilophus_citrinellus
ENSCVAG00000018717	rnaseh1	99	74.667	ENSAOCG00000015210	rnaseh1	99	74.667	Amphiprion_ocellaris
ENSCVAG00000018717	rnaseh1	99	74.667	ENSAPEG00000014104	rnaseh1	99	74.667	Amphiprion_percula
ENSCVAG00000018717	rnaseh1	99	74.333	ENSATEG00000000598	rnaseh1	98	78.261	Anabas_testudineus
ENSCVAG00000018717	rnaseh1	84	53.558	ENSAPLG00000001961	RNASEH1	100	53.558	Anas_platyrhynchos
ENSCVAG00000018717	rnaseh1	88	47.667	ENSACAG00000016857	rnaseh1	91	47.667	Anolis_carolinensis
ENSCVAG00000018717	rnaseh1	87	55.303	ENSANAG00000024055	RNASEH1	89	55.303	Aotus_nancymaae
ENSCVAG00000018717	rnaseh1	98	75.667	ENSACLG00000006741	rnaseh1	97	76.333	Astatotilapia_calliptera
ENSCVAG00000018717	rnaseh1	96	54.452	ENSAMXG00000042940	rnaseh1	97	57.299	Astyanax_mexicanus
ENSCVAG00000018717	rnaseh1	88	57.678	ENSBTAG00000016235	RNASEH1	91	57.678	Bos_taurus
ENSCVAG00000018717	rnaseh1	87	35.496	WBGene00004382	rnh-1.0	95	35.496	Caenorhabditis_elegans
ENSCVAG00000018717	rnaseh1	89	53.455	ENSCJAG00000035450	RNASEH1	92	53.455	Callithrix_jacchus
ENSCVAG00000018717	rnaseh1	92	53.381	ENSCAFG00000003259	RNASEH1	91	53.381	Canis_familiaris
ENSCVAG00000018717	rnaseh1	81	46.988	ENSCHIG00000022230	-	99	46.988	Capra_hircus
ENSCVAG00000018717	rnaseh1	88	56.667	ENSCHIG00000022264	-	90	56.667	Capra_hircus
ENSCVAG00000018717	rnaseh1	88	54.682	ENSTSYG00000012926	RNASEH1	89	54.682	Carlito_syrichta
ENSCVAG00000018717	rnaseh1	82	56.000	ENSCAPG00000004813	RNASEH1	99	56.000	Cavia_aperea
ENSCVAG00000018717	rnaseh1	88	55.805	ENSCPOG00000022278	Rnaseh1	87	55.805	Cavia_porcellus
ENSCVAG00000018717	rnaseh1	89	54.182	ENSCCAG00000038017	RNASEH1	92	54.182	Cebus_capucinus
ENSCVAG00000018717	rnaseh1	88	50.000	ENSCATG00000016818	-	89	50.000	Cercocebus_atys
ENSCVAG00000018717	rnaseh1	87	54.753	ENSCATG00000016515	-	89	54.753	Cercocebus_atys
ENSCVAG00000018717	rnaseh1	87	56.818	ENSCLAG00000002440	RNASEH1	89	56.818	Chinchilla_lanigera
ENSCVAG00000018717	rnaseh1	87	54.545	ENSCSAG00000006943	RNASEH1	89	54.545	Chlorocebus_sabaeus
ENSCVAG00000018717	rnaseh1	58	62.500	ENSCHOG00000008547	RNASEH1	87	62.500	Choloepus_hoffmanni
ENSCVAG00000018717	rnaseh1	88	55.678	ENSCPBG00000021620	RNASEH1	99	54.945	Chrysemys_picta_bellii
ENSCVAG00000018717	rnaseh1	96	35.880	ENSCING00000014054	-	99	35.880	Ciona_intestinalis
ENSCVAG00000018717	rnaseh1	74	37.131	ENSCSAVG00000000009	-	96	37.131	Ciona_savignyi
ENSCVAG00000018717	rnaseh1	87	54.924	ENSCANG00000037763	RNASEH1	89	54.924	Colobus_angolensis_palliatus
ENSCVAG00000018717	rnaseh1	88	55.639	ENSCGRG00001008950	Rnaseh1	90	56.877	Cricetulus_griseus_chok1gshd
ENSCVAG00000018717	rnaseh1	88	55.639	ENSCGRG00000006029	Rnaseh1	90	56.877	Cricetulus_griseus_crigri
ENSCVAG00000018717	rnaseh1	99	65.147	ENSCSEG00000005741	rnaseh1	95	69.314	Cynoglossus_semilaevis
ENSCVAG00000018717	rnaseh1	89	66.667	ENSDARG00000042571	rnaseh1	98	66.667	Danio_rerio
ENSCVAG00000018717	rnaseh1	87	54.545	ENSDNOG00000016056	RNASEH1	89	54.545	Dasypus_novemcinctus
ENSCVAG00000018717	rnaseh1	87	53.788	ENSDORG00000000704	Rnaseh1	89	53.788	Dipodomys_ordii
ENSCVAG00000018717	rnaseh1	87	39.310	FBgn0023171	rnh1	92	39.310	Drosophila_melanogaster
ENSCVAG00000018717	rnaseh1	88	52.256	ENSETEG00000012674	RNASEH1	89	52.256	Echinops_telfairi
ENSCVAG00000018717	rnaseh1	91	43.841	ENSEBUG00000006116	rnaseh1	79	43.841	Eptatretus_burgeri
ENSCVAG00000018717	rnaseh1	88	46.048	ENSEBUG00000008898	rnaseh1	99	46.048	Eptatretus_burgeri
ENSCVAG00000018717	rnaseh1	87	56.061	ENSEASG00005022200	RNASEH1	87	56.061	Equus_asinus_asinus
ENSCVAG00000018717	rnaseh1	87	56.061	ENSECAG00000020695	RNASEH1	87	56.061	Equus_caballus
ENSCVAG00000018717	rnaseh1	97	67.333	ENSELUG00000010112	rnaseh1	99	67.333	Esox_lucius
ENSCVAG00000018717	rnaseh1	87	55.303	ENSFCAG00000025832	RNASEH1	89	55.303	Felis_catus
ENSCVAG00000018717	rnaseh1	89	53.979	ENSFALG00000002069	RNASEH1	93	56.071	Ficedula_albicollis
ENSCVAG00000018717	rnaseh1	87	55.133	ENSFDAG00000002035	RNASEH1	79	55.133	Fukomys_damarensis
ENSCVAG00000018717	rnaseh1	97	68.259	ENSGMOG00000013818	rnaseh1	99	68.259	Gadus_morhua
ENSCVAG00000018717	rnaseh1	88	56.410	ENSGALG00000016389	RNASEH1	93	56.410	Gallus_gallus
ENSCVAG00000018717	rnaseh1	97	80.822	ENSGAFG00000001776	rnaseh1	99	80.822	Gambusia_affinis
ENSCVAG00000018717	rnaseh1	94	75.265	ENSGACG00000011935	rnaseh1	95	75.265	Gasterosteus_aculeatus
ENSCVAG00000018717	rnaseh1	88	56.204	ENSGAGG00000009150	RNASEH1	61	56.934	Gopherus_agassizii
ENSCVAG00000018717	rnaseh1	87	56.061	ENSGGOG00000034822	RNASEH1	89	56.061	Gorilla_gorilla
ENSCVAG00000018717	rnaseh1	99	74.098	ENSHBUG00000004666	rnaseh1	98	74.754	Haplochromis_burtoni
ENSCVAG00000018717	rnaseh1	87	54.545	ENSHGLG00000002585	Rnaseh1	82	54.545	Heterocephalus_glaber_female
ENSCVAG00000018717	rnaseh1	87	54.545	ENSHGLG00100005105	Rnaseh1	82	54.545	Heterocephalus_glaber_male
ENSCVAG00000018717	rnaseh1	95	69.283	ENSHCOG00000012329	rnaseh1	95	69.625	Hippocampus_comes
ENSCVAG00000018717	rnaseh1	97	59.184	ENSIPUG00000023060	rnaseh1	98	62.222	Ictalurus_punctatus
ENSCVAG00000018717	rnaseh1	87	56.439	ENSSTOG00000012774	RNASEH1	91	56.439	Ictidomys_tridecemlineatus
ENSCVAG00000018717	rnaseh1	86	45.000	ENSJJAG00000008994	-	89	45.000	Jaculus_jaculus
ENSCVAG00000018717	rnaseh1	79	53.333	ENSJJAG00000020238	Rnaseh1	90	53.333	Jaculus_jaculus
ENSCVAG00000018717	rnaseh1	88	51.321	ENSJJAG00000021481	-	89	51.321	Jaculus_jaculus
ENSCVAG00000018717	rnaseh1	99	72.000	ENSKMAG00000001373	rnaseh1	99	72.000	Kryptolebias_marmoratus
ENSCVAG00000018717	rnaseh1	99	69.333	ENSLBEG00000004480	rnaseh1	97	75.556	Labrus_bergylta
ENSCVAG00000018717	rnaseh1	91	55.088	ENSLACG00000007100	RNASEH1	92	55.439	Latimeria_chalumnae
ENSCVAG00000018717	rnaseh1	90	61.922	ENSLOCG00000017212	rnaseh1	99	61.922	Lepisosteus_oculatus
ENSCVAG00000018717	rnaseh1	87	55.133	ENSLAFG00000015091	RNASEH1	89	55.133	Loxodonta_africana
ENSCVAG00000018717	rnaseh1	88	49.057	ENSMFAG00000002323	-	90	49.057	Macaca_fascicularis
ENSCVAG00000018717	rnaseh1	87	54.924	ENSMFAG00000000063	-	89	54.924	Macaca_fascicularis
ENSCVAG00000018717	rnaseh1	87	49.430	ENSMMUG00000019280	-	89	49.430	Macaca_mulatta
ENSCVAG00000018717	rnaseh1	88	49.057	ENSMNEG00000029676	-	90	49.057	Macaca_nemestrina
ENSCVAG00000018717	rnaseh1	87	55.303	ENSMNEG00000040183	-	89	55.303	Macaca_nemestrina
ENSCVAG00000018717	rnaseh1	81	54.656	ENSMLEG00000039352	-	98	54.656	Mandrillus_leucophaeus
ENSCVAG00000018717	rnaseh1	88	50.943	ENSMLEG00000028662	-	90	50.943	Mandrillus_leucophaeus
ENSCVAG00000018717	rnaseh1	99	71.429	ENSMAMG00000019725	rnaseh1	98	74.729	Mastacembelus_armatus
ENSCVAG00000018717	rnaseh1	98	75.667	ENSMZEG00005013006	rnaseh1	97	76.333	Maylandia_zebra
ENSCVAG00000018717	rnaseh1	78	56.148	ENSMGAG00000013979	RNASEH1	99	56.148	Meleagris_gallopavo
ENSCVAG00000018717	rnaseh1	88	56.134	ENSMAUG00000014957	Rnaseh1	90	56.134	Mesocricetus_auratus
ENSCVAG00000018717	rnaseh1	87	54.924	ENSMICG00000033156	RNASEH1	88	54.924	Microcebus_murinus
ENSCVAG00000018717	rnaseh1	88	54.717	ENSMOCG00000015522	Rnaseh1	90	54.717	Microtus_ochrogaster
ENSCVAG00000018717	rnaseh1	99	71.667	ENSMMOG00000015902	rnaseh1	99	71.667	Mola_mola
ENSCVAG00000018717	rnaseh1	77	49.787	ENSMODG00000028814	-	91	50.213	Monodelphis_domestica
ENSCVAG00000018717	rnaseh1	97	53.242	ENSMODG00000014491	-	98	53.242	Monodelphis_domestica
ENSCVAG00000018717	rnaseh1	99	71.667	ENSMALG00000010565	rnaseh1	99	71.667	Monopterus_albus
ENSCVAG00000018717	rnaseh1	87	55.894	MGP_CAROLIEiJ_G0017660	Rnaseh1	89	55.894	Mus_caroli
ENSCVAG00000018717	rnaseh1	87	56.274	ENSMUSG00000020630	Rnaseh1	89	56.274	Mus_musculus
ENSCVAG00000018717	rnaseh1	87	54.924	MGP_PahariEiJ_G0029418	Rnaseh1	89	55.682	Mus_pahari
ENSCVAG00000018717	rnaseh1	87	55.970	MGP_SPRETEiJ_G0018502	Rnaseh1	89	55.970	Mus_spretus
ENSCVAG00000018717	rnaseh1	58	59.091	ENSMPUG00000012984	RNASEH1	85	59.091	Mustela_putorius_furo
ENSCVAG00000018717	rnaseh1	87	55.682	ENSNGAG00000015966	Rnaseh1	84	55.682	Nannospalax_galili
ENSCVAG00000018717	rnaseh1	98	75.000	ENSNBRG00000008739	rnaseh1	97	75.667	Neolamprologus_brichardi
ENSCVAG00000018717	rnaseh1	80	49.180	ENSNLEG00000000059	-	88	49.180	Nomascus_leucogenys
ENSCVAG00000018717	rnaseh1	87	49.621	ENSNLEG00000015400	RNASEH1	87	49.621	Nomascus_leucogenys
ENSCVAG00000018717	rnaseh1	97	35.616	ENSMEUG00000003610	-	99	35.616	Notamacropus_eugenii
ENSCVAG00000018717	rnaseh1	88	55.263	ENSOPRG00000005072	RNASEH1	90	55.263	Ochotona_princeps
ENSCVAG00000018717	rnaseh1	90	55.882	ENSODEG00000000235	Rnaseh1	89	55.882	Octodon_degus
ENSCVAG00000018717	rnaseh1	90	78.986	ENSONIG00000018697	rnaseh1	99	78.986	Oreochromis_niloticus
ENSCVAG00000018717	rnaseh1	87	55.472	ENSOCUG00000006117	RNASEH1	89	55.472	Oryctolagus_cuniculus
ENSCVAG00000018717	rnaseh1	93	76.842	ENSORLG00000018127	rnaseh1	100	76.842	Oryzias_latipes
ENSCVAG00000018717	rnaseh1	100	74.593	ENSORLG00020013660	rnaseh1	100	74.593	Oryzias_latipes_hni
ENSCVAG00000018717	rnaseh1	100	74.098	ENSORLG00015011338	rnaseh1	100	74.098	Oryzias_latipes_hsok
ENSCVAG00000018717	rnaseh1	89	71.375	ENSOMEG00000004710	rnaseh1	99	71.375	Oryzias_melastigma
ENSCVAG00000018717	rnaseh1	87	55.639	ENSOGAG00000017176	RNASEH1	89	55.639	Otolemur_garnettii
ENSCVAG00000018717	rnaseh1	90	49.826	ENSOARG00000005386	RNASEH1	93	49.826	Ovis_aries
ENSCVAG00000018717	rnaseh1	87	55.682	ENSPPAG00000034221	RNASEH1	89	55.682	Pan_paniscus
ENSCVAG00000018717	rnaseh1	87	55.682	ENSPPRG00000015513	RNASEH1	89	55.682	Panthera_pardus
ENSCVAG00000018717	rnaseh1	81	56.098	ENSPTIG00000019034	RNASEH1	83	56.098	Panthera_tigris_altaica
ENSCVAG00000018717	rnaseh1	87	55.682	ENSPTRG00000011614	RNASEH1	89	55.682	Pan_troglodytes
ENSCVAG00000018717	rnaseh1	81	48.996	ENSPTRG00000043403	-	91	48.996	Pan_troglodytes
ENSCVAG00000018717	rnaseh1	87	54.924	ENSPANG00000000443	RNASEH1	97	54.839	Papio_anubis
ENSCVAG00000018717	rnaseh1	88	48.302	ENSPANG00000018246	-	89	48.302	Papio_anubis
ENSCVAG00000018717	rnaseh1	89	60.949	ENSPKIG00000003146	rnaseh1	99	61.957	Paramormyrops_kingsleyae
ENSCVAG00000018717	rnaseh1	88	56.089	ENSPSIG00000002937	RNASEH1	99	54.015	Pelodiscus_sinensis
ENSCVAG00000018717	rnaseh1	96	65.292	ENSPMGG00000017463	rnaseh1	99	65.734	Periophthalmus_magnuspinnatus
ENSCVAG00000018717	rnaseh1	87	54.753	ENSPEMG00000022465	-	90	53.962	Peromyscus_maniculatus_bairdii
ENSCVAG00000018717	rnaseh1	53	35.583	ENSPCIG00000026047	-	92	35.583	Phascolarctos_cinereus
ENSCVAG00000018717	rnaseh1	97	51.195	ENSPCIG00000023334	-	98	51.195	Phascolarctos_cinereus
ENSCVAG00000018717	rnaseh1	98	81.356	ENSPFOG00000002841	rnaseh1	100	81.356	Poecilia_formosa
ENSCVAG00000018717	rnaseh1	83	62.846	ENSPLAG00000021349	-	98	62.846	Poecilia_latipinna
ENSCVAG00000018717	rnaseh1	98	81.356	ENSPMEG00000016826	rnaseh1	100	81.356	Poecilia_mexicana
ENSCVAG00000018717	rnaseh1	98	80.731	ENSPREG00000012197	rnaseh1	100	80.731	Poecilia_reticulata
ENSCVAG00000018717	rnaseh1	80	51.230	ENSPPYG00000008067	-	90	51.230	Pongo_abelii
ENSCVAG00000018717	rnaseh1	87	45.076	ENSPPYG00000025873	RNASEH1	88	45.076	Pongo_abelii
ENSCVAG00000018717	rnaseh1	88	54.682	ENSPCAG00000002500	RNASEH1	90	54.682	Procavia_capensis
ENSCVAG00000018717	rnaseh1	88	48.496	ENSPCOG00000019444	RNASEH1	89	48.496	Propithecus_coquereli
ENSCVAG00000018717	rnaseh1	93	49.823	ENSPVAG00000002070	RNASEH1	94	49.823	Pteropus_vampyrus
ENSCVAG00000018717	rnaseh1	98	75.333	ENSPNYG00000001292	rnaseh1	97	76.000	Pundamilia_nyererei
ENSCVAG00000018717	rnaseh1	97	61.462	ENSPNAG00000022344	rnaseh1	99	61.462	Pygocentrus_nattereri
ENSCVAG00000018717	rnaseh1	87	55.056	ENSRNOG00000008584	Rnaseh1	89	56.654	Rattus_norvegicus
ENSCVAG00000018717	rnaseh1	87	54.924	ENSRBIG00000034222	RNASEH1	88	54.924	Rhinopithecus_bieti
ENSCVAG00000018717	rnaseh1	87	54.924	ENSRROG00000041761	RNASEH1	88	54.924	Rhinopithecus_roxellana
ENSCVAG00000018717	rnaseh1	87	40.323	YMR234W	-	89	40.323	Saccharomyces_cerevisiae
ENSCVAG00000018717	rnaseh1	89	53.818	ENSSBOG00000025411	RNASEH1	92	53.818	Saimiri_boliviensis_boliviensis
ENSCVAG00000018717	rnaseh1	88	56.929	ENSSHAG00000013051	RNASEH1	88	56.929	Sarcophilus_harrisii
ENSCVAG00000018717	rnaseh1	97	62.092	ENSSFOG00015002709	rnaseh1	99	62.092	Scleropages_formosus
ENSCVAG00000018717	rnaseh1	99	74.333	ENSSMAG00000007586	rnaseh1	99	74.333	Scophthalmus_maximus
ENSCVAG00000018717	rnaseh1	97	73.973	ENSSDUG00000008217	rnaseh1	98	76.173	Seriola_dumerili
ENSCVAG00000018717	rnaseh1	84	75.591	ENSSLDG00000000442	rnaseh1	95	76.378	Seriola_lalandi_dorsalis
ENSCVAG00000018717	rnaseh1	94	51.568	ENSSPUG00000006644	RNASEH1	99	51.568	Sphenodon_punctatus
ENSCVAG00000018717	rnaseh1	99	75.908	ENSSPAG00000009353	rnaseh1	99	75.908	Stegastes_partitus
ENSCVAG00000018717	rnaseh1	88	55.185	ENSSSCG00000025305	RNASEH1	90	55.185	Sus_scrofa
ENSCVAG00000018717	rnaseh1	97	53.135	ENSTGUG00000012980	RNASEH1	99	52.769	Taeniopygia_guttata
ENSCVAG00000018717	rnaseh1	95	72.474	ENSTRUG00000015774	rnaseh1	99	73.818	Takifugu_rubripes
ENSCVAG00000018717	rnaseh1	89	75.556	ENSTNIG00000010715	rnaseh1	97	75.556	Tetraodon_nigroviridis
ENSCVAG00000018717	rnaseh1	88	52.788	ENSTTRG00000001615	RNASEH1	90	52.788	Tursiops_truncatus
ENSCVAG00000018717	rnaseh1	68	55.288	ENSUMAG00000003941	RNASEH1	65	55.288	Ursus_maritimus
ENSCVAG00000018717	rnaseh1	88	48.519	ENSVPAG00000011589	RNASEH1	90	48.519	Vicugna_pacos
ENSCVAG00000018717	rnaseh1	92	54.643	ENSVVUG00000008633	RNASEH1	82	54.643	Vulpes_vulpes
ENSCVAG00000018717	rnaseh1	50	51.656	ENSXETG00000030371	-	74	51.656	Xenopus_tropicalis
ENSCVAG00000018717	rnaseh1	93	52.465	ENSXETG00000001212	rnaseh1	99	51.656	Xenopus_tropicalis
ENSCVAG00000018717	rnaseh1	97	81.973	ENSXMAG00000002357	rnaseh1	99	81.973	Xiphophorus_maculatus