EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000018930 (Gene tree)
Gene ID: 107099324
Gene Symbol: cnot1
Alias: cdc39-like|im:7141761|kiaa1007l|wu:fc58h04|zgc:152902
Full Name: CCR4-NOT transcription complex subunit 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 25510 bases
Position: chrKL653359.1:220410-245919
Accession: 107099324
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000030371	Not1	PF04054.15	3.5e-153	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000031733	-	6882	XM_015397387	ENSCVAP00000030371	2293 (aa)	XP_015252873	-

Gene Model

Click here to download ENSCVAG00000018930's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000018930's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000018930	cnot1	100	83.159	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSCVAG00000018930	cnot1	100	94.607	ENSAPOG00000005042	cnot1	100	95.082	Acanthochromis_polyacanthus
ENSCVAG00000018930	cnot1	100	83.201	ENSAMEG00000017298	CNOT1	100	83.368	Ailuropoda_melanoleuca
ENSCVAG00000018930	cnot1	90	97.335	ENSACIG00000016003	cnot1	97	97.335	Amphilophus_citrinellus
ENSCVAG00000018930	cnot1	100	90.741	ENSAPEG00000022342	cnot1	100	91.204	Amphiprion_percula
ENSCVAG00000018930	cnot1	100	94.694	ENSATEG00000012892	cnot1	100	95.125	Anabas_testudineus
ENSCVAG00000018930	cnot1	100	82.598	ENSAPLG00000007162	CNOT1	100	82.764	Anas_platyrhynchos
ENSCVAG00000018930	cnot1	90	81.521	ENSACAG00000001602	CNOT1	98	81.442	Anolis_carolinensis
ENSCVAG00000018930	cnot1	100	80.199	ENSANAG00000038198	CNOT1	100	80.365	Aotus_nancymaae
ENSCVAG00000018930	cnot1	100	99.158	ENSACLG00000014234	cnot1	97	99.158	Astatotilapia_calliptera
ENSCVAG00000018930	cnot1	100	90.378	ENSAMXG00000013170	cnot1	100	90.294	Astyanax_mexicanus
ENSCVAG00000018930	cnot1	95	96.008	ENSBTAG00000020782	CNOT1	97	96.008	Bos_taurus
ENSCVAG00000018930	cnot1	79	44.338	WBGene00002845	let-711	92	54.008	Caenorhabditis_elegans
ENSCVAG00000018930	cnot1	100	82.902	ENSCJAG00000011318	CNOT1	100	92.182	Callithrix_jacchus
ENSCVAG00000018930	cnot1	100	82.647	ENSCAFG00000008426	CNOT1	100	82.813	Canis_familiaris
ENSCVAG00000018930	cnot1	100	88.784	ENSCAFG00020010156	CNOT1	97	92.843	Canis_lupus_dingo
ENSCVAG00000018930	cnot1	100	82.986	ENSCHIG00000010452	CNOT1	100	83.153	Capra_hircus
ENSCVAG00000018930	cnot1	100	82.986	ENSTSYG00000006888	CNOT1	100	83.153	Carlito_syrichta
ENSCVAG00000018930	cnot1	100	96.494	ENSCPOG00000013026	CNOT1	97	96.494	Cavia_porcellus
ENSCVAG00000018930	cnot1	100	81.401	ENSCCAG00000026333	CNOT1	100	81.568	Cebus_capucinus
ENSCVAG00000018930	cnot1	100	82.944	ENSCATG00000032625	CNOT1	100	83.111	Cercocebus_atys
ENSCVAG00000018930	cnot1	100	96.494	ENSCLAG00000006289	CNOT1	97	96.494	Chinchilla_lanigera
ENSCVAG00000018930	cnot1	100	82.944	ENSCSAG00000004731	CNOT1	100	83.111	Chlorocebus_sabaeus
ENSCVAG00000018930	cnot1	80	97.527	ENSCHOG00000009712	CNOT1	80	97.527	Choloepus_hoffmanni
ENSCVAG00000018930	cnot1	93	95.446	ENSCPBG00000026222	CNOT1	98	95.446	Chrysemys_picta_bellii
ENSCVAG00000018930	cnot1	100	77.254	ENSCING00000009149	-	98	77.254	Ciona_intestinalis
ENSCVAG00000018930	cnot1	89	76.741	ENSCSAVG00000002414	-	97	76.891	Ciona_savignyi
ENSCVAG00000018930	cnot1	100	81.284	ENSCANG00000040534	CNOT1	100	81.449	Colobus_angolensis_palliatus
ENSCVAG00000018930	cnot1	100	82.687	ENSCGRG00001016365	Cnot1	100	82.854	Cricetulus_griseus_chok1gshd
ENSCVAG00000018930	cnot1	100	82.687	ENSCGRG00000001714	Cnot1	100	82.854	Cricetulus_griseus_crigri
ENSCVAG00000018930	cnot1	100	89.664	ENSDARG00000004174	cnot1	100	89.790	Danio_rerio
ENSCVAG00000018930	cnot1	100	80.700	ENSDNOG00000013250	CNOT1	100	80.867	Dasypus_novemcinctus
ENSCVAG00000018930	cnot1	72	51.820	FBgn0085436	Not1	99	47.954	Drosophila_melanogaster
ENSCVAG00000018930	cnot1	86	94.127	ENSETEG00000012806	CNOT1	84	94.127	Echinops_telfairi
ENSCVAG00000018930	cnot1	83	75.893	ENSEBUG00000011534	cnot1	95	75.893	Eptatretus_burgeri
ENSCVAG00000018930	cnot1	100	94.759	ENSEASG00005005819	CNOT1	97	96.008	Equus_asinus_asinus
ENSCVAG00000018930	cnot1	100	89.621	ENSECAG00000009889	CNOT1	100	89.664	Equus_caballus
ENSCVAG00000018930	cnot1	87	96.000	ENSEEUG00000006015	CNOT1	85	96.000	Erinaceus_europaeus
ENSCVAG00000018930	cnot1	100	88.447	ENSELUG00000014085	cnot1	100	88.645	Esox_lucius
ENSCVAG00000018930	cnot1	100	82.744	ENSFCAG00000025155	CNOT1	100	82.911	Felis_catus
ENSCVAG00000018930	cnot1	100	82.978	ENSFALG00000007285	CNOT1	100	83.145	Ficedula_albicollis
ENSCVAG00000018930	cnot1	100	96.494	ENSFDAG00000013399	CNOT1	97	96.494	Fukomys_damarensis
ENSCVAG00000018930	cnot1	100	99.299	ENSFHEG00000020574	cnot1	97	99.299	Fundulus_heteroclitus
ENSCVAG00000018930	cnot1	90	88.292	ENSGMOG00000012864	cnot1	100	88.385	Gadus_morhua
ENSCVAG00000018930	cnot1	100	82.852	ENSGALG00000002301	CNOT1	100	83.020	Gallus_gallus
ENSCVAG00000018930	cnot1	100	99.860	ENSGAFG00000015005	cnot1	97	99.860	Gambusia_affinis
ENSCVAG00000018930	cnot1	90	98.773	ENSGACG00000002606	cnot1	97	98.773	Gasterosteus_aculeatus
ENSCVAG00000018930	cnot1	100	83.271	ENSGAGG00000022646	CNOT1	100	86.073	Gopherus_agassizii
ENSCVAG00000018930	cnot1	100	82.986	ENSGGOG00000009547	CNOT1	100	83.153	Gorilla_gorilla
ENSCVAG00000018930	cnot1	100	99.158	ENSHBUG00000001729	cnot1	97	99.158	Haplochromis_burtoni
ENSCVAG00000018930	cnot1	100	96.494	ENSHGLG00000014322	CNOT1	97	96.494	Heterocephalus_glaber_female
ENSCVAG00000018930	cnot1	100	97.346	ENSHCOG00000006501	cnot1	97	97.346	Hippocampus_comes
ENSCVAG00000018930	cnot1	100	88.898	ENSIPUG00000011915	cnot1	100	88.898	Ictalurus_punctatus
ENSCVAG00000018930	cnot1	100	96.494	ENSSTOG00000005490	CNOT1	97	96.494	Ictidomys_tridecemlineatus
ENSCVAG00000018930	cnot1	100	82.360	ENSJJAG00000000633	Cnot1	100	82.485	Jaculus_jaculus
ENSCVAG00000018930	cnot1	100	99.439	ENSKMAG00000006149	cnot1	97	99.439	Kryptolebias_marmoratus
ENSCVAG00000018930	cnot1	95	98.204	ENSLBEG00000004740	cnot1	100	98.204	Labrus_bergylta
ENSCVAG00000018930	cnot1	100	83.640	ENSLACG00000010869	CNOT1	100	83.473	Latimeria_chalumnae
ENSCVAG00000018930	cnot1	100	87.875	ENSLOCG00000006324	cnot1	100	88.689	Lepisosteus_oculatus
ENSCVAG00000018930	cnot1	100	82.833	ENSLAFG00000000098	CNOT1	100	83.000	Loxodonta_africana
ENSCVAG00000018930	cnot1	100	83.159	ENSMFAG00000035888	CNOT1	100	83.326	Macaca_fascicularis
ENSCVAG00000018930	cnot1	100	82.902	ENSMMUG00000014625	CNOT1	94	98.545	Macaca_mulatta
ENSCVAG00000018930	cnot1	100	80.776	ENSMNEG00000031820	CNOT1	100	82.792	Macaca_nemestrina
ENSCVAG00000018930	cnot1	100	81.622	ENSMLEG00000040933	CNOT1	100	81.788	Mandrillus_leucophaeus
ENSCVAG00000018930	cnot1	100	89.015	ENSMAMG00000016524	cnot1	100	89.436	Mastacembelus_armatus
ENSCVAG00000018930	cnot1	100	93.463	ENSMZEG00005016210	cnot1	100	93.463	Maylandia_zebra
ENSCVAG00000018930	cnot1	100	83.110	ENSMGAG00000001908	CNOT1	100	83.277	Meleagris_gallopavo
ENSCVAG00000018930	cnot1	100	83.166	ENSMICG00000007071	CNOT1	100	83.375	Microcebus_murinus
ENSCVAG00000018930	cnot1	100	82.728	ENSMOCG00000017969	Cnot1	100	82.854	Microtus_ochrogaster
ENSCVAG00000018930	cnot1	100	93.270	ENSMMOG00000019134	cnot1	100	93.615	Mola_mola
ENSCVAG00000018930	cnot1	100	82.910	ENSMODG00000014199	CNOT1	100	83.076	Monodelphis_domestica
ENSCVAG00000018930	cnot1	100	90.189	ENSMALG00000008645	cnot1	100	90.274	Monopterus_albus
ENSCVAG00000018930	cnot1	98	96.190	MGP_CAROLIEiJ_G0031430	Cnot1	92	96.190	Mus_caroli
ENSCVAG00000018930	cnot1	100	82.901	ENSMUSG00000036550	Cnot1	100	83.027	Mus_musculus
ENSCVAG00000018930	cnot1	100	82.770	MGP_PahariEiJ_G0023028	Cnot1	100	82.895	Mus_pahari
ENSCVAG00000018930	cnot1	100	82.770	MGP_SPRETEiJ_G0032549	Cnot1	100	82.895	Mus_spretus
ENSCVAG00000018930	cnot1	100	82.986	ENSMPUG00000004830	CNOT1	100	83.153	Mustela_putorius_furo
ENSCVAG00000018930	cnot1	100	82.944	ENSMLUG00000003728	CNOT1	100	83.069	Myotis_lucifugus
ENSCVAG00000018930	cnot1	100	82.861	ENSNGAG00000018628	Cnot1	100	82.986	Nannospalax_galili
ENSCVAG00000018930	cnot1	97	93.648	ENSNBRG00000019358	cnot1	100	94.418	Neolamprologus_brichardi
ENSCVAG00000018930	cnot1	100	82.979	ENSNLEG00000003566	CNOT1	100	83.104	Nomascus_leucogenys
ENSCVAG00000018930	cnot1	87	91.051	ENSMEUG00000006145	CNOT1	85	91.051	Notamacropus_eugenii
ENSCVAG00000018930	cnot1	85	97.778	ENSOPRG00000005604	CNOT1	86	97.778	Ochotona_princeps
ENSCVAG00000018930	cnot1	100	96.494	ENSODEG00000016337	CNOT1	97	96.494	Octodon_degus
ENSCVAG00000018930	cnot1	100	99.158	ENSONIG00000007358	cnot1	97	99.158	Oreochromis_niloticus
ENSCVAG00000018930	cnot1	90	81.726	ENSOANG00000012109	CNOT1	100	82.858	Ornithorhynchus_anatinus
ENSCVAG00000018930	cnot1	100	82.986	ENSOCUG00000006911	CNOT1	100	83.153	Oryctolagus_cuniculus
ENSCVAG00000018930	cnot1	100	99.018	ENSORLG00000013734	cnot1	97	99.018	Oryzias_latipes
ENSCVAG00000018930	cnot1	100	92.707	ENSORLG00020017012	cnot1	97	92.707	Oryzias_latipes_hni
ENSCVAG00000018930	cnot1	100	92.707	ENSORLG00015007091	cnot1	97	92.707	Oryzias_latipes_hsok
ENSCVAG00000018930	cnot1	100	89.403	ENSOMEG00000015124	cnot1	100	89.445	Oryzias_melastigma
ENSCVAG00000018930	cnot1	100	82.986	ENSOGAG00000000543	CNOT1	100	83.153	Otolemur_garnettii
ENSCVAG00000018930	cnot1	100	82.986	ENSOARG00000001567	CNOT1	100	83.153	Ovis_aries
ENSCVAG00000018930	cnot1	100	82.944	ENSPPAG00000022013	CNOT1	100	83.111	Pan_paniscus
ENSCVAG00000018930	cnot1	100	82.986	ENSPPRG00000004867	CNOT1	100	83.153	Panthera_pardus
ENSCVAG00000018930	cnot1	100	82.986	ENSPTIG00000012589	CNOT1	100	83.153	Panthera_tigris_altaica
ENSCVAG00000018930	cnot1	100	82.703	ENSPTRG00000008183	CNOT1	100	82.869	Pan_troglodytes
ENSCVAG00000018930	cnot1	100	84.966	ENSPANG00000020901	CNOT1	100	85.134	Papio_anubis
ENSCVAG00000018930	cnot1	100	88.684	ENSPKIG00000023538	CNOT1	100	88.726	Paramormyrops_kingsleyae
ENSCVAG00000018930	cnot1	100	87.020	ENSPKIG00000002914	CNOT1	99	87.003	Paramormyrops_kingsleyae
ENSCVAG00000018930	cnot1	100	83.061	ENSPSIG00000005499	CNOT1	100	83.229	Pelodiscus_sinensis
ENSCVAG00000018930	cnot1	100	73.439	ENSPMAG00000009381	cnot1	100	73.501	Petromyzon_marinus
ENSCVAG00000018930	cnot1	100	96.494	ENSPCIG00000007343	CNOT1	97	96.494	Phascolarctos_cinereus
ENSCVAG00000018930	cnot1	99	99.855	ENSPFOG00000003497	cnot1	97	99.855	Poecilia_formosa
ENSCVAG00000018930	cnot1	95	98.603	ENSPLAG00000014018	cnot1	97	98.603	Poecilia_latipinna
ENSCVAG00000018930	cnot1	95	98.603	ENSPMEG00000005868	cnot1	97	98.603	Poecilia_mexicana
ENSCVAG00000018930	cnot1	95	98.802	ENSPREG00000018793	cnot1	97	98.802	Poecilia_reticulata
ENSCVAG00000018930	cnot1	100	82.986	ENSPPYG00000007410	CNOT1	100	83.153	Pongo_abelii
ENSCVAG00000018930	cnot1	88	91.549	ENSPCAG00000003241	CNOT1	86	91.549	Procavia_capensis
ENSCVAG00000018930	cnot1	100	82.882	ENSPCOG00000027139	CNOT1	100	83.090	Propithecus_coquereli
ENSCVAG00000018930	cnot1	100	80.275	ENSPVAG00000004243	CNOT1	100	80.692	Pteropus_vampyrus
ENSCVAG00000018930	cnot1	100	94.766	ENSPNYG00000012919	cnot1	100	94.766	Pundamilia_nyererei
ENSCVAG00000018930	cnot1	100	89.469	ENSPNAG00000000246	cnot1	100	89.259	Pygocentrus_nattereri
ENSCVAG00000018930	cnot1	100	96.073	ENSRNOG00000012271	Cnot1	97	96.073	Rattus_norvegicus
ENSCVAG00000018930	cnot1	100	80.873	ENSRBIG00000044598	CNOT1	100	81.040	Rhinopithecus_bieti
ENSCVAG00000018930	cnot1	100	82.944	ENSRROG00000000906	CNOT1	100	83.111	Rhinopithecus_roxellana
ENSCVAG00000018930	cnot1	100	78.930	ENSSBOG00000029155	CNOT1	100	78.971	Saimiri_boliviensis_boliviensis
ENSCVAG00000018930	cnot1	100	96.494	ENSSHAG00000012187	CNOT1	97	96.494	Sarcophilus_harrisii
ENSCVAG00000018930	cnot1	100	86.856	ENSSFOG00015017614	cnot1	100	86.689	Scleropages_formosus
ENSCVAG00000018930	cnot1	100	99.158	ENSSMAG00000013844	cnot1	97	99.158	Scophthalmus_maximus
ENSCVAG00000018930	cnot1	100	94.351	ENSSDUG00000021491	cnot1	100	94.782	Seriola_dumerili
ENSCVAG00000018930	cnot1	100	99.018	ENSSLDG00000014816	cnot1	97	99.018	Seriola_lalandi_dorsalis
ENSCVAG00000018930	cnot1	86	97.400	ENSSARG00000000762	CNOT1	88	97.400	Sorex_araneus
ENSCVAG00000018930	cnot1	100	90.745	ENSSPAG00000018802	cnot1	100	91.207	Stegastes_partitus
ENSCVAG00000018930	cnot1	100	96.213	ENSSSCG00000002799	CNOT1	97	96.213	Sus_scrofa
ENSCVAG00000018930	cnot1	100	82.916	ENSTGUG00000005919	CNOT1	100	83.083	Taeniopygia_guttata
ENSCVAG00000018930	cnot1	100	98.177	ENSTNIG00000018706	cnot1	97	98.177	Tetraodon_nigroviridis
ENSCVAG00000018930	cnot1	80	97.887	ENSTBEG00000000720	CNOT1	77	97.887	Tupaia_belangeri
ENSCVAG00000018930	cnot1	95	80.243	ENSTTRG00000008460	CNOT1	95	80.300	Tursiops_truncatus
ENSCVAG00000018930	cnot1	100	82.986	ENSUAMG00000009251	CNOT1	100	83.153	Ursus_americanus
ENSCVAG00000018930	cnot1	100	82.986	ENSUMAG00000021291	CNOT1	100	83.153	Ursus_maritimus
ENSCVAG00000018930	cnot1	97	92.987	ENSVPAG00000008846	CNOT1	94	92.987	Vicugna_pacos
ENSCVAG00000018930	cnot1	100	88.784	ENSVVUG00000024037	CNOT1	97	92.843	Vulpes_vulpes
ENSCVAG00000018930	cnot1	100	80.688	ENSXETG00000015900	cnot1	100	80.730	Xenopus_tropicalis
ENSCVAG00000018930	cnot1	100	100.000	ENSXCOG00000013552	cnot1	97	100.000	Xiphophorus_couchianus
ENSCVAG00000018930	cnot1	100	100.000	ENSXMAG00000006031	cnot1	97	100.000	Xiphophorus_maculatus