EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000018991 (Gene tree)
Gene ID: 107083468
Gene Symbol: dhx40
Alias: -
Full Name: DEAH-box helicase 40
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 11007 bases
Position: chrKL652575.1:1019767-1030773
Accession: 107083468
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000030405	DEAD	PF00270.29	8.2e-07	1	1
ENSCVAP00000016049	DEAD	PF00270.29	8.3e-07	1	1
ENSCVAP00000016049	HA2	PF04408.23	3.3e-18	1	1
ENSCVAP00000030405	HA2	PF04408.23	3.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000031768	-	2226	-	ENSCVAP00000030405	741 (aa)	-	-
ENSCVAT00000024309	-	2502	XM_015372715	ENSCVAP00000016049	740 (aa)	XP_015228201	UPI000742B780

Gene Model

Click here to download ENSCVAG00000018991's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000018991's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000018991	dhx40	85	41.296	ENSCVAG00000018153	dhx37	57	41.296
ENSCVAG00000018991	dhx40	84	43.434	ENSCVAG00000011692	dhx57	50	43.434
ENSCVAG00000018991	dhx40	92	40.000	ENSCVAG00000011673	DHX15	86	40.000
ENSCVAG00000018991	dhx40	94	43.022	ENSCVAG00000006188	dhx8	58	43.022
ENSCVAG00000018991	dhx40	93	41.810	ENSCVAG00000023150	dhx38	53	41.810
ENSCVAG00000018991	dhx40	88	39.728	ENSCVAG00000008998	dhx33	92	39.728
ENSCVAG00000018991	dhx40	89	36.692	ENSCVAG00000007009	dhx16	58	36.596
ENSCVAG00000018991	dhx40	65	34.314	ENSCVAG00000006410	dhx30	68	37.563
ENSCVAG00000018991	dhx40	90	42.245	ENSCVAG00000010301	zgc:158828	92	42.245
ENSCVAG00000018991	dhx40	81	38.889	ENSCVAG00000005470	dhx36	56	38.889

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000018991	dhx40	97	66.944	ENSG00000108406	DHX40	99	62.681	Homo_sapiens
ENSCVAG00000018991	dhx40	98	88.049	ENSAPOG00000018707	dhx40	100	87.973	Acanthochromis_polyacanthus
ENSCVAG00000018991	dhx40	99	65.235	ENSAMEG00000011567	DHX40	95	65.235	Ailuropoda_melanoleuca
ENSCVAG00000018991	dhx40	98	87.912	ENSACIG00000020220	dhx40	100	87.838	Amphilophus_citrinellus
ENSCVAG00000018991	dhx40	98	88.187	ENSAOCG00000000250	dhx40	100	88.108	Amphiprion_ocellaris
ENSCVAG00000018991	dhx40	98	87.775	ENSAPEG00000022898	dhx40	99	87.703	Amphiprion_percula
ENSCVAG00000018991	dhx40	98	87.088	ENSATEG00000023287	dhx40	100	87.027	Anabas_testudineus
ENSCVAG00000018991	dhx40	89	69.313	ENSAPLG00000013368	DHX40	98	69.313	Anas_platyrhynchos
ENSCVAG00000018991	dhx40	98	67.675	ENSACAG00000012418	DHX40	99	67.439	Anolis_carolinensis
ENSCVAG00000018991	dhx40	99	65.235	ENSANAG00000019888	DHX40	95	65.235	Aotus_nancymaae
ENSCVAG00000018991	dhx40	98	87.637	ENSACLG00000024213	dhx40	100	87.432	Astatotilapia_calliptera
ENSCVAG00000018991	dhx40	80	75.932	ENSAMXG00000002031	dhx40	94	75.932	Astyanax_mexicanus
ENSCVAG00000018991	dhx40	97	66.944	ENSBTAG00000017868	DHX40	92	66.944	Bos_taurus
ENSCVAG00000018991	dhx40	99	65.101	ENSCJAG00000001554	DHX40	95	65.101	Callithrix_jacchus
ENSCVAG00000018991	dhx40	99	64.966	ENSCAFG00000017625	DHX40	95	64.391	Canis_familiaris
ENSCVAG00000018991	dhx40	99	65.101	ENSCAFG00020026016	DHX40	87	65.101	Canis_lupus_dingo
ENSCVAG00000018991	dhx40	97	66.944	ENSCHIG00000016173	DHX40	92	66.944	Capra_hircus
ENSCVAG00000018991	dhx40	99	65.101	ENSTSYG00000034797	DHX40	95	65.101	Carlito_syrichta
ENSCVAG00000018991	dhx40	92	57.038	ENSCAPG00000016034	DHX40	91	63.473	Cavia_aperea
ENSCVAG00000018991	dhx40	97	66.806	ENSCPOG00000003432	DHX40	100	63.473	Cavia_porcellus
ENSCVAG00000018991	dhx40	90	68.468	ENSCCAG00000028712	DHX40	95	68.468	Cebus_capucinus
ENSCVAG00000018991	dhx40	97	63.624	ENSCATG00000030038	DHX40	92	63.624	Cercocebus_atys
ENSCVAG00000018991	dhx40	99	65.101	ENSCLAG00000012016	DHX40	100	63.473	Chinchilla_lanigera
ENSCVAG00000018991	dhx40	85	62.758	ENSCSAG00000005860	DHX40	98	62.758	Chlorocebus_sabaeus
ENSCVAG00000018991	dhx40	97	67.222	ENSCHOG00000004423	DHX40	97	67.222	Choloepus_hoffmanni
ENSCVAG00000018991	dhx40	98	71.074	ENSCPBG00000006085	DHX40	97	71.074	Chrysemys_picta_bellii
ENSCVAG00000018991	dhx40	99	65.235	ENSCANG00000038492	DHX40	95	65.235	Colobus_angolensis_palliatus
ENSCVAG00000018991	dhx40	97	66.667	ENSCGRG00001000389	Dhx40	92	66.667	Cricetulus_griseus_chok1gshd
ENSCVAG00000018991	dhx40	97	66.667	ENSCGRG00000009491	Dhx40	92	66.667	Cricetulus_griseus_crigri
ENSCVAG00000018991	dhx40	99	83.627	ENSCSEG00000002696	dhx40	99	83.649	Cynoglossus_semilaevis
ENSCVAG00000018991	dhx40	98	76.934	ENSDARG00000041586	dhx40	98	76.934	Danio_rerio
ENSCVAG00000018991	dhx40	99	65.638	ENSDNOG00000025497	DHX40	95	65.638	Dasypus_novemcinctus
ENSCVAG00000018991	dhx40	99	62.013	ENSDORG00000006521	Dhx40	95	62.013	Dipodomys_ordii
ENSCVAG00000018991	dhx40	79	56.849	ENSETEG00000018771	DHX40	75	56.849	Echinops_telfairi
ENSCVAG00000018991	dhx40	99	65.369	ENSEASG00005002476	DHX40	95	65.369	Equus_asinus_asinus
ENSCVAG00000018991	dhx40	99	65.369	ENSECAG00000018606	DHX40	95	65.369	Equus_caballus
ENSCVAG00000018991	dhx40	97	63.472	ENSEEUG00000002531	DHX40	92	63.472	Erinaceus_europaeus
ENSCVAG00000018991	dhx40	99	79.757	ENSELUG00000008644	dhx40	99	79.757	Esox_lucius
ENSCVAG00000018991	dhx40	99	65.235	ENSFCAG00000001409	DHX40	95	65.235	Felis_catus
ENSCVAG00000018991	dhx40	97	68.333	ENSFALG00000005587	DHX40	98	68.333	Ficedula_albicollis
ENSCVAG00000018991	dhx40	99	65.101	ENSFDAG00000017214	DHX40	100	63.473	Fukomys_damarensis
ENSCVAG00000018991	dhx40	98	92.033	ENSFHEG00000001190	dhx40	100	91.892	Fundulus_heteroclitus
ENSCVAG00000018991	dhx40	97	79.580	ENSGMOG00000001188	dhx40	99	79.580	Gadus_morhua
ENSCVAG00000018991	dhx40	84	68.109	ENSGALG00000005126	DHX40	98	68.109	Gallus_gallus
ENSCVAG00000018991	dhx40	98	91.896	ENSGAFG00000014480	dhx40	100	91.757	Gambusia_affinis
ENSCVAG00000018991	dhx40	97	86.072	ENSGACG00000006300	dhx40	99	85.892	Gasterosteus_aculeatus
ENSCVAG00000018991	dhx40	98	70.110	ENSGAGG00000024012	DHX40	97	70.110	Gopherus_agassizii
ENSCVAG00000018991	dhx40	52	62.629	ENSGGOG00000042982	-	100	62.629	Gorilla_gorilla
ENSCVAG00000018991	dhx40	98	87.912	ENSHBUG00000022398	dhx40	100	87.703	Haplochromis_burtoni
ENSCVAG00000018991	dhx40	99	64.966	ENSHGLG00000006600	DHX40	100	63.473	Heterocephalus_glaber_female
ENSCVAG00000018991	dhx40	87	56.422	ENSHGLG00000006411	-	92	56.422	Heterocephalus_glaber_female
ENSCVAG00000018991	dhx40	87	56.422	ENSHGLG00100009091	-	92	56.422	Heterocephalus_glaber_male
ENSCVAG00000018991	dhx40	97	66.667	ENSHGLG00100009935	-	100	63.473	Heterocephalus_glaber_male
ENSCVAG00000018991	dhx40	100	83.378	ENSHCOG00000012913	dhx40	99	83.378	Hippocampus_comes
ENSCVAG00000018991	dhx40	98	75.962	ENSIPUG00000015673	dhx40	98	75.962	Ictalurus_punctatus
ENSCVAG00000018991	dhx40	97	62.639	ENSSTOG00000016219	DHX40	100	63.473	Ictidomys_tridecemlineatus
ENSCVAG00000018991	dhx40	97	63.333	ENSJJAG00000010433	Dhx40	92	63.333	Jaculus_jaculus
ENSCVAG00000018991	dhx40	98	88.187	ENSKMAG00000003505	dhx40	100	87.973	Kryptolebias_marmoratus
ENSCVAG00000018991	dhx40	97	86.890	ENSLBEG00000018707	dhx40	99	86.813	Labrus_bergylta
ENSCVAG00000018991	dhx40	98	73.251	ENSLACG00000008892	DHX40	97	73.251	Latimeria_chalumnae
ENSCVAG00000018991	dhx40	98	71.154	ENSLOCG00000003916	dhx40	99	71.154	Lepisosteus_oculatus
ENSCVAG00000018991	dhx40	97	66.667	ENSLAFG00000000087	DHX40	92	66.667	Loxodonta_africana
ENSCVAG00000018991	dhx40	97	66.944	ENSMFAG00000041526	DHX40	92	66.944	Macaca_fascicularis
ENSCVAG00000018991	dhx40	97	62.778	ENSMNEG00000043921	DHX40	92	62.778	Macaca_nemestrina
ENSCVAG00000018991	dhx40	97	66.944	ENSMLEG00000043033	DHX40	92	66.944	Mandrillus_leucophaeus
ENSCVAG00000018991	dhx40	98	87.500	ENSMAMG00000001985	dhx40	100	87.432	Mastacembelus_armatus
ENSCVAG00000018991	dhx40	98	87.775	ENSMZEG00005013826	dhx40	100	87.568	Maylandia_zebra
ENSCVAG00000018991	dhx40	86	67.925	ENSMGAG00000007238	DHX40	98	67.925	Meleagris_gallopavo
ENSCVAG00000018991	dhx40	86	68.500	ENSMAUG00000014047	Dhx40	87	68.500	Mesocricetus_auratus
ENSCVAG00000018991	dhx40	99	65.235	ENSMICG00000027647	DHX40	95	65.235	Microcebus_murinus
ENSCVAG00000018991	dhx40	97	66.389	ENSMOCG00000022697	Dhx40	100	63.473	Microtus_ochrogaster
ENSCVAG00000018991	dhx40	98	82.280	ENSMMOG00000005353	dhx40	99	81.892	Mola_mola
ENSCVAG00000018991	dhx40	97	67.500	ENSMODG00000014468	DHX40	93	67.500	Monodelphis_domestica
ENSCVAG00000018991	dhx40	100	86.622	ENSMALG00000012529	dhx40	100	86.622	Monopterus_albus
ENSCVAG00000018991	dhx40	97	66.806	MGP_CAROLIEiJ_G0016920	Dhx40	100	62.874	Mus_caroli
ENSCVAG00000018991	dhx40	97	66.944	ENSMUSG00000018425	Dhx40	100	62.874	Mus_musculus
ENSCVAG00000018991	dhx40	97	66.667	MGP_PahariEiJ_G0018050	Dhx40	100	62.874	Mus_pahari
ENSCVAG00000018991	dhx40	97	66.944	MGP_SPRETEiJ_G0017766	Dhx40	100	62.874	Mus_spretus
ENSCVAG00000018991	dhx40	97	66.944	ENSMPUG00000015213	DHX40	92	66.944	Mustela_putorius_furo
ENSCVAG00000018991	dhx40	97	66.713	ENSMLUG00000003644	DHX40	92	66.713	Myotis_lucifugus
ENSCVAG00000018991	dhx40	99	64.966	ENSNGAG00000014507	Dhx40	100	63.473	Nannospalax_galili
ENSCVAG00000018991	dhx40	100	87.027	ENSNBRG00000018144	dhx40	100	87.027	Neolamprologus_brichardi
ENSCVAG00000018991	dhx40	74	65.000	ENSMEUG00000002887	-	86	65.000	Notamacropus_eugenii
ENSCVAG00000018991	dhx40	99	64.832	ENSODEG00000013635	DHX40	100	63.473	Octodon_degus
ENSCVAG00000018991	dhx40	97	89.058	ENSONIG00000005195	dhx40	100	89.058	Oreochromis_niloticus
ENSCVAG00000018991	dhx40	97	71.250	ENSOANG00000008516	DHX40	96	71.250	Ornithorhynchus_anatinus
ENSCVAG00000018991	dhx40	98	86.951	ENSORLG00000014185	dhx40	99	86.951	Oryzias_latipes
ENSCVAG00000018991	dhx40	98	86.813	ENSORLG00015016235	dhx40	99	86.813	Oryzias_latipes_hsok
ENSCVAG00000018991	dhx40	98	86.538	ENSOMEG00000006570	dhx40	99	86.538	Oryzias_melastigma
ENSCVAG00000018991	dhx40	97	67.083	ENSOGAG00000007790	DHX40	92	67.083	Otolemur_garnettii
ENSCVAG00000018991	dhx40	97	66.944	ENSOARG00000012632	DHX40	92	66.944	Ovis_aries
ENSCVAG00000018991	dhx40	97	66.667	ENSPPAG00000032782	DHX40	92	66.667	Pan_paniscus
ENSCVAG00000018991	dhx40	99	65.235	ENSPPRG00000010073	DHX40	95	65.235	Panthera_pardus
ENSCVAG00000018991	dhx40	97	66.806	ENSPTIG00000006557	DHX40	92	66.806	Panthera_tigris_altaica
ENSCVAG00000018991	dhx40	97	66.944	ENSPANG00000022266	DHX40	92	66.944	Papio_anubis
ENSCVAG00000018991	dhx40	99	74.898	ENSPKIG00000013016	dhx40	99	74.898	Paramormyrops_kingsleyae
ENSCVAG00000018991	dhx40	98	70.248	ENSPSIG00000010463	DHX40	91	70.248	Pelodiscus_sinensis
ENSCVAG00000018991	dhx40	99	83.989	ENSPMGG00000015257	dhx40	99	83.989	Periophthalmus_magnuspinnatus
ENSCVAG00000018991	dhx40	97	66.667	ENSPEMG00000013338	Dhx40	100	63.473	Peromyscus_maniculatus_bairdii
ENSCVAG00000018991	dhx40	97	68.056	ENSPCIG00000021874	DHX40	93	68.056	Phascolarctos_cinereus
ENSCVAG00000018991	dhx40	98	92.170	ENSPFOG00000006579	dhx40	100	92.027	Poecilia_formosa
ENSCVAG00000018991	dhx40	98	92.170	ENSPLAG00000007062	dhx40	100	92.027	Poecilia_latipinna
ENSCVAG00000018991	dhx40	98	92.170	ENSPMEG00000008446	dhx40	100	92.027	Poecilia_mexicana
ENSCVAG00000018991	dhx40	100	92.162	ENSPREG00000005584	dhx40	100	92.162	Poecilia_reticulata
ENSCVAG00000018991	dhx40	99	62.013	ENSPPYG00000008812	DHX40	95	62.013	Pongo_abelii
ENSCVAG00000018991	dhx40	77	66.078	ENSPCAG00000006468	DHX40	79	66.078	Procavia_capensis
ENSCVAG00000018991	dhx40	90	55.904	ENSPCOG00000008219	DHX40	95	55.904	Propithecus_coquereli
ENSCVAG00000018991	dhx40	98	87.088	ENSPNYG00000013343	dhx40	100	86.892	Pundamilia_nyererei
ENSCVAG00000018991	dhx40	99	70.981	ENSPNAG00000024815	dhx40	99	70.981	Pygocentrus_nattereri
ENSCVAG00000018991	dhx40	97	66.667	ENSRNOG00000004549	Dhx40	92	66.667	Rattus_norvegicus
ENSCVAG00000018991	dhx40	99	65.235	ENSSBOG00000024911	DHX40	95	65.235	Saimiri_boliviensis_boliviensis
ENSCVAG00000018991	dhx40	97	68.750	ENSSHAG00000016859	DHX40	93	68.750	Sarcophilus_harrisii
ENSCVAG00000018991	dhx40	99	74.795	ENSSFOG00015003020	dhx40	98	74.795	Scleropages_formosus
ENSCVAG00000018991	dhx40	99	86.731	ENSSMAG00000001178	dhx40	100	86.622	Scophthalmus_maximus
ENSCVAG00000018991	dhx40	98	88.324	ENSSDUG00000012511	dhx40	100	88.243	Seriola_dumerili
ENSCVAG00000018991	dhx40	98	88.462	ENSSLDG00000010146	dhx40	100	88.378	Seriola_lalandi_dorsalis
ENSCVAG00000018991	dhx40	86	66.667	ENSSARG00000009800	DHX40	82	66.667	Sorex_araneus
ENSCVAG00000018991	dhx40	97	71.170	ENSSPUG00000016309	DHX40	96	71.170	Sphenodon_punctatus
ENSCVAG00000018991	dhx40	98	87.912	ENSSPAG00000015901	dhx40	99	87.908	Stegastes_partitus
ENSCVAG00000018991	dhx40	99	65.235	ENSSSCG00000017665	DHX40	95	65.235	Sus_scrofa
ENSCVAG00000018991	dhx40	97	68.889	ENSTGUG00000007512	DHX40	98	68.889	Taeniopygia_guttata
ENSCVAG00000018991	dhx40	98	78.817	ENSTRUG00000010369	dhx40	98	78.817	Takifugu_rubripes
ENSCVAG00000018991	dhx40	97	79.444	ENSTNIG00000004503	dhx40	100	79.444	Tetraodon_nigroviridis
ENSCVAG00000018991	dhx40	97	66.111	ENSTBEG00000014980	DHX40	92	66.111	Tupaia_belangeri
ENSCVAG00000018991	dhx40	97	63.056	ENSTTRG00000017203	DHX40	92	63.056	Tursiops_truncatus
ENSCVAG00000018991	dhx40	99	65.235	ENSUAMG00000009734	DHX40	98	67.367	Ursus_americanus
ENSCVAG00000018991	dhx40	99	65.147	ENSUMAG00000022721	DHX40	95	65.147	Ursus_maritimus
ENSCVAG00000018991	dhx40	97	66.806	ENSVPAG00000009355	DHX40	96	66.806	Vicugna_pacos
ENSCVAG00000018991	dhx40	99	65.101	ENSVVUG00000013502	DHX40	87	65.101	Vulpes_vulpes
ENSCVAG00000018991	dhx40	97	65.928	ENSXETG00000010939	dhx40	99	65.928	Xenopus_tropicalis
ENSCVAG00000018991	dhx40	98	91.862	ENSXCOG00000001822	dhx40	98	91.862	Xiphophorus_couchianus
ENSCVAG00000018991	dhx40	98	91.896	ENSXMAG00000012466	dhx40	100	91.757	Xiphophorus_maculatus