EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000019227 (Gene tree)
Gene ID: 107100436
Gene Symbol: zgc:101559
Alias: -
Full Name: ras-related protein Rab-33B-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 3672 bases
Position: chrKL653471.1:96183-99854
Accession: 107100436
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000016307	MMR_HSR1	PF01926.23	2.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000031864	-	1587	XM_015398903	ENSCVAP00000016307	234 (aa)	XP_015254389	UPI000742CD06

Gene Model

Click here to download ENSCVAG00000019227's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000019227's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000019227	zgc:101559	85	50.971	ENSCVAG00000000862	-	91	50.971
ENSCVAG00000019227	zgc:101559	64	43.624	ENSCVAG00000022249	rab6a	71	43.624
ENSCVAG00000019227	zgc:101559	67	47.170	ENSCVAG00000014915	RAB39B	74	47.170
ENSCVAG00000019227	zgc:101559	84	39.086	ENSCVAG00000022649	-	95	39.086
ENSCVAG00000019227	zgc:101559	85	32.227	ENSCVAG00000010727	rab4a	97	32.227
ENSCVAG00000019227	zgc:101559	74	40.462	ENSCVAG00000017021	-	78	40.462
ENSCVAG00000019227	zgc:101559	67	48.077	ENSCVAG00000012806	rab35b	97	41.117
ENSCVAG00000019227	zgc:101559	64	37.013	ENSCVAG00000014038	RAB29	74	37.013
ENSCVAG00000019227	zgc:101559	69	32.919	ENSCVAG00000008389	si:ch73-116o1.2	81	34.104
ENSCVAG00000019227	zgc:101559	72	47.619	ENSCVAG00000022585	-	80	47.619
ENSCVAG00000019227	zgc:101559	63	41.497	ENSCVAG00000015451	rab18a	71	41.497
ENSCVAG00000019227	zgc:101559	65	37.086	ENSCVAG00000020501	rab23	71	37.838
ENSCVAG00000019227	zgc:101559	65	34.615	ENSCVAG00000016312	rab9a	73	34.615
ENSCVAG00000019227	zgc:101559	74	39.080	ENSCVAG00000004751	rab6bb	81	39.080
ENSCVAG00000019227	zgc:101559	66	47.097	ENSCVAG00000015862	-	72	47.097
ENSCVAG00000019227	zgc:101559	65	37.179	ENSCVAG00000001150	si:dkey-13a21.4	75	37.179
ENSCVAG00000019227	zgc:101559	63	41.060	ENSCVAG00000017064	si:dkey-34d22.5	67	41.060
ENSCVAG00000019227	zgc:101559	73	39.181	ENSCVAG00000009550	rab5c	75	39.181
ENSCVAG00000019227	zgc:101559	72	41.520	ENSCVAG00000018433	rab22a	84	41.520
ENSCVAG00000019227	zgc:101559	86	59.901	ENSCVAG00000011665	rab33a	80	58.447
ENSCVAG00000019227	zgc:101559	76	39.444	ENSCVAG00000014416	-	83	39.444
ENSCVAG00000019227	zgc:101559	62	31.757	ENSCVAG00000006083	si:cabz01085950.1	71	31.757
ENSCVAG00000019227	zgc:101559	63	34.459	ENSCVAG00000001281	rhebl1	79	34.459
ENSCVAG00000019227	zgc:101559	73	33.333	ENSCVAG00000002953	RAB9A	85	33.333
ENSCVAG00000019227	zgc:101559	72	46.429	ENSCVAG00000022799	-	81	46.429
ENSCVAG00000019227	zgc:101559	71	34.132	ENSCVAG00000006062	KRAS	97	33.163
ENSCVAG00000019227	zgc:101559	85	38.614	ENSCVAG00000001618	rab41	93	38.614
ENSCVAG00000019227	zgc:101559	76	37.640	ENSCVAG00000020003	rab25b	84	37.143
ENSCVAG00000019227	zgc:101559	73	40.351	ENSCVAG00000008239	rab5aa	77	40.351
ENSCVAG00000019227	zgc:101559	67	41.667	ENSCVAG00000017623	rab2a	73	41.667
ENSCVAG00000019227	zgc:101559	78	39.247	ENSCVAG00000003539	rab12	74	39.247
ENSCVAG00000019227	zgc:101559	73	44.706	ENSCVAG00000003537	si:dkey-16l2.16	85	43.333
ENSCVAG00000019227	zgc:101559	74	39.884	ENSCVAG00000019718	-	78	39.884
ENSCVAG00000019227	zgc:101559	74	46.821	ENSCVAG00000009222	zgc:171927	78	46.821
ENSCVAG00000019227	zgc:101559	74	38.728	ENSCVAG00000019751	-	78	38.728
ENSCVAG00000019227	zgc:101559	64	39.869	ENSCVAG00000021826	rab9b	75	39.869
ENSCVAG00000019227	zgc:101559	85	36.765	ENSCVAG00000008126	-	95	36.765
ENSCVAG00000019227	zgc:101559	71	38.150	ENSCVAG00000000281	RAB7A	80	38.150
ENSCVAG00000019227	zgc:101559	71	49.701	ENSCVAG00000018085	rab30	80	49.701
ENSCVAG00000019227	zgc:101559	71	40.120	ENSCVAG00000022353	rab14	75	40.120
ENSCVAG00000019227	zgc:101559	63	33.333	ENSCVAG00000011432	rabl2	64	33.333
ENSCVAG00000019227	zgc:101559	64	41.611	ENSCVAG00000012889	rab6ba	71	41.611
ENSCVAG00000019227	zgc:101559	86	35.407	ENSCVAG00000005429	-	98	35.407
ENSCVAG00000019227	zgc:101559	85	35.354	ENSCVAG00000008670	hrasb	97	35.354
ENSCVAG00000019227	zgc:101559	72	35.795	ENSCVAG00000013135	rasl11a	68	35.795
ENSCVAG00000019227	zgc:101559	74	31.214	ENSCVAG00000004027	rheb	93	31.214
ENSCVAG00000019227	zgc:101559	74	38.150	ENSCVAG00000020016	rab11al	79	38.150
ENSCVAG00000019227	zgc:101559	63	42.857	ENSCVAG00000008276	RAB15	86	45.283
ENSCVAG00000019227	zgc:101559	76	38.983	ENSCVAG00000013878	rab11a	81	38.983

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000019227	zgc:101559	100	85.470	ENSAPOG00000007503	zgc:101559	100	85.470	Acanthochromis_polyacanthus
ENSCVAG00000019227	zgc:101559	87	91.133	ENSACIG00000021459	zgc:101559	89	91.133	Amphilophus_citrinellus
ENSCVAG00000019227	zgc:101559	100	86.325	ENSAOCG00000024675	zgc:101559	100	86.325	Amphiprion_ocellaris
ENSCVAG00000019227	zgc:101559	100	86.325	ENSAPEG00000005176	zgc:101559	100	86.325	Amphiprion_percula
ENSCVAG00000019227	zgc:101559	100	84.615	ENSATEG00000007761	zgc:101559	100	84.615	Anabas_testudineus
ENSCVAG00000019227	zgc:101559	99	84.848	ENSACLG00000027006	zgc:101559	98	84.848	Astatotilapia_calliptera
ENSCVAG00000019227	zgc:101559	100	72.766	ENSAMXG00000040460	zgc:101559	94	72.766	Astyanax_mexicanus
ENSCVAG00000019227	zgc:101559	100	79.060	ENSCSEG00000006243	zgc:101559	100	79.060	Cynoglossus_semilaevis
ENSCVAG00000019227	zgc:101559	100	73.617	ENSDARG00000003257	zgc:101559	100	73.617	Danio_rerio
ENSCVAG00000019227	zgc:101559	100	91.026	ENSFHEG00000011483	zgc:101559	100	91.026	Fundulus_heteroclitus
ENSCVAG00000019227	zgc:101559	91	81.604	ENSGMOG00000011665	zgc:101559	99	81.604	Gadus_morhua
ENSCVAG00000019227	zgc:101559	100	91.453	ENSGAFG00000021202	zgc:101559	100	91.453	Gambusia_affinis
ENSCVAG00000019227	zgc:101559	91	83.491	ENSGACG00000001725	zgc:101559	91	83.491	Gasterosteus_aculeatus
ENSCVAG00000019227	zgc:101559	100	85.043	ENSHBUG00000007827	zgc:101559	100	85.043	Haplochromis_burtoni
ENSCVAG00000019227	zgc:101559	100	75.949	ENSHCOG00000009133	zgc:101559	100	77.731	Hippocampus_comes
ENSCVAG00000019227	zgc:101559	90	74.286	ENSIPUG00000022394	zgc:101559	91	74.286	Ictalurus_punctatus
ENSCVAG00000019227	zgc:101559	100	80.851	ENSKMAG00000002862	zgc:101559	100	80.851	Kryptolebias_marmoratus
ENSCVAG00000019227	zgc:101559	100	83.333	ENSLBEG00000025798	zgc:101559	100	83.333	Labrus_bergylta
ENSCVAG00000019227	zgc:101559	86	67.327	ENSLACG00000011557	zgc:101559	87	67.327	Latimeria_chalumnae
ENSCVAG00000019227	zgc:101559	89	74.163	ENSLOCG00000005904	zgc:101559	89	74.163	Lepisosteus_oculatus
ENSCVAG00000019227	zgc:101559	100	83.333	ENSMAMG00000017431	zgc:101559	100	83.333	Mastacembelus_armatus
ENSCVAG00000019227	zgc:101559	100	85.043	ENSMZEG00005021778	zgc:101559	100	85.043	Maylandia_zebra
ENSCVAG00000019227	zgc:101559	100	80.342	ENSMMOG00000019779	zgc:101559	100	80.342	Mola_mola
ENSCVAG00000019227	zgc:101559	100	82.051	ENSMALG00000003712	zgc:101559	100	82.051	Monopterus_albus
ENSCVAG00000019227	zgc:101559	100	84.188	ENSNBRG00000002684	zgc:101559	100	84.188	Neolamprologus_brichardi
ENSCVAG00000019227	zgc:101559	100	85.043	ENSONIG00000006715	-	100	85.043	Oreochromis_niloticus
ENSCVAG00000019227	zgc:101559	100	83.761	ENSORLG00000030642	zgc:101559	100	83.761	Oryzias_latipes
ENSCVAG00000019227	zgc:101559	100	82.906	ENSORLG00020012685	zgc:101559	100	82.906	Oryzias_latipes_hni
ENSCVAG00000019227	zgc:101559	100	83.333	ENSORLG00015016047	zgc:101559	100	83.333	Oryzias_latipes_hsok
ENSCVAG00000019227	zgc:101559	100	85.470	ENSOMEG00000013128	zgc:101559	100	85.470	Oryzias_melastigma
ENSCVAG00000019227	zgc:101559	96	70.982	ENSPKIG00000013397	zgc:101559	94	70.982	Paramormyrops_kingsleyae
ENSCVAG00000019227	zgc:101559	100	92.735	ENSPFOG00000009101	-	100	92.735	Poecilia_formosa
ENSCVAG00000019227	zgc:101559	100	93.162	ENSPLAG00000020627	zgc:101559	100	93.162	Poecilia_latipinna
ENSCVAG00000019227	zgc:101559	100	93.590	ENSPMEG00000010152	zgc:101559	100	93.590	Poecilia_mexicana
ENSCVAG00000019227	zgc:101559	100	93.162	ENSPREG00000007017	zgc:101559	100	93.162	Poecilia_reticulata
ENSCVAG00000019227	zgc:101559	100	85.043	ENSPNYG00000012922	zgc:101559	100	85.043	Pundamilia_nyererei
ENSCVAG00000019227	zgc:101559	99	73.276	ENSPNAG00000017856	zgc:101559	100	73.276	Pygocentrus_nattereri
ENSCVAG00000019227	zgc:101559	85	77.000	ENSSFOG00015006175	zgc:101559	86	77.000	Scleropages_formosus
ENSCVAG00000019227	zgc:101559	99	81.116	ENSSMAG00000002229	zgc:101559	99	81.116	Scophthalmus_maximus
ENSCVAG00000019227	zgc:101559	100	86.752	ENSSDUG00000008151	zgc:101559	100	86.752	Seriola_dumerili
ENSCVAG00000019227	zgc:101559	100	86.752	ENSSLDG00000019214	zgc:101559	100	86.752	Seriola_lalandi_dorsalis
ENSCVAG00000019227	zgc:101559	100	86.752	ENSSPAG00000006404	zgc:101559	100	86.752	Stegastes_partitus
ENSCVAG00000019227	zgc:101559	100	80.342	ENSTRUG00000009903	zgc:101559	100	80.342	Takifugu_rubripes
ENSCVAG00000019227	zgc:101559	93	80.275	ENSTNIG00000015000	zgc:101559	93	79.909	Tetraodon_nigroviridis
ENSCVAG00000019227	zgc:101559	100	92.735	ENSXCOG00000018683	zgc:101559	100	92.735	Xiphophorus_couchianus
ENSCVAG00000019227	zgc:101559	100	93.162	ENSXMAG00000011171	zgc:101559	100	93.162	Xiphophorus_maculatus