EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCVAG00000019246 (Gene tree)
Gene ID
107096430
Gene Symbol
pabpc4
Alias
cb12|sb:cb12
Full Name
polyadenylate-binding protein 4-like
Gene Type
protein_coding
Species
Cyprinodon_variegatus
Status
putative
Strand
Plus strand
Length
21677 bases
Position
chrKL653123.1:475901-497577
Accession
107096430
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCVAP00000016323PABPPF00658.185.2e-3111
ENSCVAP00000016323RRM_5PF13893.62.2e-0911
ENSCVAP00000016323RRM_1PF00076.221.3e-9014
ENSCVAP00000016323RRM_1PF00076.221.3e-9024
ENSCVAP00000016323RRM_1PF00076.221.3e-9034
ENSCVAP00000016323RRM_1PF00076.221.3e-9044
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCVAT00000024705-2680XM_015393077ENSCVAP00000016323616 (aa)XP_015248563UPI000742C26E
Gene Model
Click here to download ENSCVAG00000019246's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000019246's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCVAG00000019246pabpc49877.134ENSCVAG00000021872pabpc1a9876.651
ENSCVAG00000019246pabpc45731.361ENSCVAG00000017866trnau1apb5031.361
ENSCVAG00000019246pabpc46034.737ENSCVAG00000001635rbms2a5933.981
ENSCVAG00000019246pabpc49867.921ENSCVAG00000015943-9485.246
ENSCVAG00000019246pabpc46538.636ENSCVAG00000018670si:dkey-205h23.29135.616
ENSCVAG00000019246pabpc45932.237ENSCVAG00000016617-9131.694
ENSCVAG00000019246pabpc45938.636ENSCVAG00000004383-5838.636
ENSCVAG00000019246pabpc49876.090ENSCVAG00000005489pabpc1b9875.606
ENSCVAG00000019246pabpc46136.145ENSCVAG00000013913ELAVL28636.145
ENSCVAG00000019246pabpc46036.145ENSCVAG00000014060elavl39236.145
ENSCVAG00000019246pabpc45230.986ENSCVAG00000006051-8930.986
ENSCVAG00000019246pabpc46134.940ENSCVAG00000019080elavl48630.968
ENSCVAG00000019246pabpc46134.951ENSCVAG00000013006rbms2b5034.951
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCVAG00000019246pabpc410085.413ENSG00000090621PABPC49996.396Homo_sapiens
ENSCVAG00000019246pabpc410096.266ENSAPOG00000001161pabpc49996.266Acanthochromis_polyacanthus
ENSCVAG00000019246pabpc49949.838ENSAMEG00000015083-9848.548Ailuropoda_melanoleuca
ENSCVAG00000019246pabpc410080.699ENSAMEG00000011535-9979.939Ailuropoda_melanoleuca
ENSCVAG00000019246pabpc410095.652ENSACIG00000023343pabpc49995.652Amphilophus_citrinellus
ENSCVAG00000019246pabpc49996.552ENSAOCG00000021529pabpc49996.104Amphiprion_ocellaris
ENSCVAG00000019246pabpc49996.552ENSAPEG00000019196pabpc49996.104Amphiprion_percula
ENSCVAG00000019246pabpc49995.738ENSATEG00000007402pabpc49995.462Anabas_testudineus
ENSCVAG00000019246pabpc49986.880ENSAPLG00000009729-10086.240Anas_platyrhynchos
ENSCVAG00000019246pabpc49985.461ENSACAG00000002544PABPC410083.865Anolis_carolinensis
ENSCVAG00000019246pabpc410083.703ENSANAG00000025079PABPC49983.466Aotus_nancymaae
ENSCVAG00000019246pabpc410096.429ENSACLG00000019558pabpc49996.429Astatotilapia_calliptera
ENSCVAG00000019246pabpc410086.560ENSAMXG00000018779pabpc49986.560Astyanax_mexicanus
ENSCVAG00000019246pabpc45788.312ENSBTAG00000048536-8888.312Bos_taurus
ENSCVAG00000019246pabpc410082.453ENSBTAG00000017125PABPC49981.677Bos_taurus
ENSCVAG00000019246pabpc410083.703ENSCJAG00000002512-9983.466Callithrix_jacchus
ENSCVAG00000019246pabpc47580.357ENSCJAG00000045953-9075.207Callithrix_jacchus
ENSCVAG00000019246pabpc410083.861ENSCAFG00000003081PABPC49983.784Canis_familiaris
ENSCVAG00000019246pabpc410080.851ENSCAFG00020004161PABPC49980.091Canis_lupus_dingo
ENSCVAG00000019246pabpc410080.699ENSCHIG00000019398-9979.787Capra_hircus
ENSCVAG00000019246pabpc410065.620ENSCHIG00000023385-9865.149Capra_hircus
ENSCVAG00000019246pabpc410084.261ENSTSYG00000006532PABPC49983.625Carlito_syrichta
ENSCVAG00000019246pabpc410083.819ENSCAPG00000015984PABPC49983.307Cavia_aperea
ENSCVAG00000019246pabpc410083.754ENSCPOG00000009552PABPC49983.625Cavia_porcellus
ENSCVAG00000019246pabpc410083.703ENSCCAG00000037306PABPC49983.466Cebus_capucinus
ENSCVAG00000019246pabpc410083.861ENSCATG00000042164PABPC49983.625Cercocebus_atys
ENSCVAG00000019246pabpc410083.596ENSCLAG00000011899PABPC49983.625Chinchilla_lanigera
ENSCVAG00000019246pabpc410080.851ENSCSAG00000001135PABPC49979.939Chlorocebus_sabaeus
ENSCVAG00000019246pabpc48889.474ENSCHOG00000005327PABPC47990.027Choloepus_hoffmanni
ENSCVAG00000019246pabpc49986.741ENSCPBG00000001038PABPC49986.102Chrysemys_picta_bellii
ENSCVAG00000019246pabpc410083.861ENSCANG00000034177PABPC410083.625Colobus_angolensis_palliatus
ENSCVAG00000019246pabpc49885.479ENSCGRG00001018166Pabpc49984.168Cricetulus_griseus_chok1gshd
ENSCVAG00000019246pabpc49885.479ENSCGRG00000009777Pabpc410084.168Cricetulus_griseus_crigri
ENSCVAG00000019246pabpc410095.469ENSCSEG00000000130pabpc49995.469Cynoglossus_semilaevis
ENSCVAG00000019246pabpc49992.869ENSDARG00000059259pabpc49992.605Danio_rerio
ENSCVAG00000019246pabpc410082.632ENSDNOG00000018444-10082.363Dasypus_novemcinctus
ENSCVAG00000019246pabpc410082.481ENSDORG00000011581Pabpc49981.804Dipodomys_ordii
ENSCVAG00000019246pabpc48654.562ENSETEG00000009172-9952.813Echinops_telfairi
ENSCVAG00000019246pabpc410094.545ENSETEG00000018453-8394.545Echinops_telfairi
ENSCVAG00000019246pabpc49777.393ENSEBUG00000013782pabpc49977.236Eptatretus_burgeri
ENSCVAG00000019246pabpc49976.935ENSEBUG00000000992pabpc49976.613Eptatretus_burgeri
ENSCVAG00000019246pabpc410080.851ENSEASG00005014119PABPC49979.939Equus_asinus_asinus
ENSCVAG00000019246pabpc410080.851ENSECAG00000009396PABPC49979.939Equus_caballus
ENSCVAG00000019246pabpc49879.316ENSEEUG00000002962PABPC49978.267Erinaceus_europaeus
ENSCVAG00000019246pabpc49993.366ENSELUG00000003195pabpc49892.504Esox_lucius
ENSCVAG00000019246pabpc410083.861ENSFCAG00000015254-9983.784Felis_catus
ENSCVAG00000019246pabpc49986.262ENSFALG00000000543PABPC49985.623Ficedula_albicollis
ENSCVAG00000019246pabpc49053.178ENSFDAG00000010581-9950.775Fukomys_damarensis
ENSCVAG00000019246pabpc410080.547ENSFDAG00000020016-9979.787Fukomys_damarensis
ENSCVAG00000019246pabpc410099.026ENSFHEG00000007548pabpc49999.026Fundulus_heteroclitus
ENSCVAG00000019246pabpc49991.011ENSGMOG00000019025pabpc49891.011Gadus_morhua
ENSCVAG00000019246pabpc49987.220ENSGALG00000003800PABPC49986.581Gallus_gallus
ENSCVAG00000019246pabpc410097.415ENSGAFG00000018195pabpc49999.282Gambusia_affinis
ENSCVAG00000019246pabpc410093.506ENSGACG00000007179pabpc49993.506Gasterosteus_aculeatus
ENSCVAG00000019246pabpc49987.061ENSGAGG00000001888PABPC49986.422Gopherus_agassizii
ENSCVAG00000019246pabpc410083.703ENSGGOG00000004002PABPC49983.466Gorilla_gorilla
ENSCVAG00000019246pabpc410096.266ENSHBUG00000020206pabpc49996.266Haplochromis_burtoni
ENSCVAG00000019246pabpc410083.596ENSHGLG00000011162PABPC49983.466Heterocephalus_glaber_female
ENSCVAG00000019246pabpc410083.596ENSHGLG00100001580PABPC49983.466Heterocephalus_glaber_male
ENSCVAG00000019246pabpc410093.831ENSHCOG00000012694pabpc49994.805Hippocampus_comes
ENSCVAG00000019246pabpc49892.308ENSIPUG00000016620pabpc49991.520Ictalurus_punctatus
ENSCVAG00000019246pabpc410085.413ENSSTOG00000010416PABPC49984.765Ictidomys_tridecemlineatus
ENSCVAG00000019246pabpc410081.464ENSJJAG00000007781Pabpc49980.560Jaculus_jaculus
ENSCVAG00000019246pabpc410095.469ENSKMAG00000013597pabpc49995.469Kryptolebias_marmoratus
ENSCVAG00000019246pabpc49995.440ENSLBEG00000013654pabpc49895.440Labrus_bergylta
ENSCVAG00000019246pabpc49987.400ENSLACG00000011907PABPC49986.922Latimeria_chalumnae
ENSCVAG00000019246pabpc410091.853ENSLOCG00000001877pabpc49991.853Lepisosteus_oculatus
ENSCVAG00000019246pabpc410085.575ENSLAFG00000000151PABPC49984.927Loxodonta_africana
ENSCVAG00000019246pabpc410083.861ENSMFAG00000041481PABPC49983.625Macaca_fascicularis
ENSCVAG00000019246pabpc410080.851ENSMMUG00000007497PABPC49979.939Macaca_mulatta
ENSCVAG00000019246pabpc410083.861ENSMNEG00000043054PABPC49983.625Macaca_nemestrina
ENSCVAG00000019246pabpc410083.861ENSMLEG00000040716PABPC49983.625Mandrillus_leucophaeus
ENSCVAG00000019246pabpc49996.552ENSMAMG00000010025pabpc49996.104Mastacembelus_armatus
ENSCVAG00000019246pabpc410096.266ENSMZEG00005006141pabpc49996.266Maylandia_zebra
ENSCVAG00000019246pabpc49983.277ENSMGAG00000005408PABPC410082.601Meleagris_gallopavo
ENSCVAG00000019246pabpc45980.117ENSMAUG00000004089-9280.117Mesocricetus_auratus
ENSCVAG00000019246pabpc47379.048ENSMAUG00000001295-8782.353Mesocricetus_auratus
ENSCVAG00000019246pabpc47690.625ENSMAUG00000019763-8286.239Mesocricetus_auratus
ENSCVAG00000019246pabpc410075.627ENSMICG00000036729-10074.194Microcebus_murinus
ENSCVAG00000019246pabpc48884.982ENSMICG00000016633-9984.615Microcebus_murinus
ENSCVAG00000019246pabpc49984.539ENSMOCG00000006763Pabpc49983.144Microtus_ochrogaster
ENSCVAG00000019246pabpc410092.532ENSMMOG00000002363pabpc49992.532Mola_mola
ENSCVAG00000019246pabpc46072.358ENSMODG00000018051-9572.358Monodelphis_domestica
ENSCVAG00000019246pabpc49883.906ENSMODG00000017657-9982.669Monodelphis_domestica
ENSCVAG00000019246pabpc49996.236ENSMALG00000011017pabpc49995.793Monopterus_albus
ENSCVAG00000019246pabpc410080.091MGP_CAROLIEiJ_G0026435-10096.454Mus_caroli
ENSCVAG00000019246pabpc410073.333MGP_CAROLIEiJ_G0024864-10073.805Mus_caroli
ENSCVAG00000019246pabpc410085.251ENSMUSG00000011257Pabpc49896.226Mus_musculus
ENSCVAG00000019246pabpc410080.243MGP_PahariEiJ_G0028765Pabpc410097.163Mus_pahari
ENSCVAG00000019246pabpc410070.844MGP_SPRETEiJ_G0027415Pabpc410097.163Mus_spretus
ENSCVAG00000019246pabpc49646.179ENSMPUG00000006836-9945.681Mustela_putorius_furo
ENSCVAG00000019246pabpc410080.851ENSMPUG00000014414-9980.091Mustela_putorius_furo
ENSCVAG00000019246pabpc410085.089ENSMLUG00000012068PABPC49984.441Myotis_lucifugus
ENSCVAG00000019246pabpc410085.575ENSNGAG00000018292Pabpc49984.927Nannospalax_galili
ENSCVAG00000019246pabpc46198.558ENSNBRG00000009708pabpc49898.558Neolamprologus_brichardi
ENSCVAG00000019246pabpc46698.795ENSNBRG00000010047-7298.795Neolamprologus_brichardi
ENSCVAG00000019246pabpc410083.861ENSNLEG00000011928PABPC49983.625Nomascus_leucogenys
ENSCVAG00000019246pabpc48593.651ENSOPRG00000011984PABPC48593.651Ochotona_princeps
ENSCVAG00000019246pabpc45482.857ENSODEG00000013457-10082.857Octodon_degus
ENSCVAG00000019246pabpc410083.703ENSODEG00000006592-9983.148Octodon_degus
ENSCVAG00000019246pabpc49974.220ENSODEG00000017434-10073.805Octodon_degus
ENSCVAG00000019246pabpc410096.266ENSONIG00000008176pabpc49996.266Oreochromis_niloticus
ENSCVAG00000019246pabpc49986.901ENSOANG00000010001PABPC49986.262Ornithorhynchus_anatinus
ENSCVAG00000019246pabpc49581.051ENSOCUG00000000562PABPC48880.096Oryctolagus_cuniculus
ENSCVAG00000019246pabpc49997.778ENSORLG00000017479pabpc49897.778Oryzias_latipes
ENSCVAG00000019246pabpc49997.778ENSORLG00020018644pabpc49897.778Oryzias_latipes_hni
ENSCVAG00000019246pabpc49997.778ENSORLG00015015042pabpc49897.778Oryzias_latipes_hsok
ENSCVAG00000019246pabpc49996.552ENSOMEG00000014410pabpc49895.942Oryzias_melastigma
ENSCVAG00000019246pabpc410082.016ENSOGAG00000004067PABPC49981.579Otolemur_garnettii
ENSCVAG00000019246pabpc410080.699ENSOARG00000020060PABPC49979.787Ovis_aries
ENSCVAG00000019246pabpc410083.703ENSPPAG00000043625PABPC49983.466Pan_paniscus
ENSCVAG00000019246pabpc410083.861ENSPPRG00000024727PABPC49983.784Panthera_pardus
ENSCVAG00000019246pabpc410083.861ENSPTIG00000005829PABPC49983.784Panthera_tigris_altaica
ENSCVAG00000019246pabpc410083.703ENSPTRG00000000573PABPC49983.466Pan_troglodytes
ENSCVAG00000019246pabpc410083.861ENSPANG00000009484PABPC49983.625Papio_anubis
ENSCVAG00000019246pabpc49991.613ENSPKIG00000025356pabpc49791.613Paramormyrops_kingsleyae
ENSCVAG00000019246pabpc49987.220ENSPSIG00000016892PABPC49986.581Pelodiscus_sinensis
ENSCVAG00000019246pabpc49991.042ENSPMGG00000009073pabpc49890.228Periophthalmus_magnuspinnatus
ENSCVAG00000019246pabpc49982.622ENSPEMG00000023569-9982.803Peromyscus_maniculatus_bairdii
ENSCVAG00000019246pabpc49980.063ENSPEMG00000024193-9979.747Peromyscus_maniculatus_bairdii
ENSCVAG00000019246pabpc49675.000ENSPMAG00000007885pabpc410073.727Petromyzon_marinus
ENSCVAG00000019246pabpc48875.575ENSPMAG00000002836pabpc49976.283Petromyzon_marinus
ENSCVAG00000019246pabpc49887.948ENSPCIG00000020674PABPC410095.388Phascolarctos_cinereus
ENSCVAG00000019246pabpc410098.377ENSPFOG00000002682pabpc49998.377Poecilia_formosa
ENSCVAG00000019246pabpc410098.539ENSPLAG00000010112pabpc49998.539Poecilia_latipinna
ENSCVAG00000019246pabpc410098.377ENSPMEG00000019739pabpc49998.377Poecilia_mexicana
ENSCVAG00000019246pabpc410098.864ENSPREG00000001589pabpc49998.864Poecilia_reticulata
ENSCVAG00000019246pabpc410080.699ENSPPYG00000001506PABPC49979.787Pongo_abelii
ENSCVAG00000019246pabpc410075.988ENSPCAG00000003341PABPC49975.076Procavia_capensis
ENSCVAG00000019246pabpc410083.728ENSPCOG00000023725-9983.492Propithecus_coquereli
ENSCVAG00000019246pabpc49968.717ENSPCOG00000025882-10068.190Propithecus_coquereli
ENSCVAG00000019246pabpc49979.236ENSPVAG00000002187PABPC410078.571Pteropus_vampyrus
ENSCVAG00000019246pabpc410096.429ENSPNYG00000006134pabpc49996.429Pundamilia_nyererei
ENSCVAG00000019246pabpc410093.881ENSPNAG00000024355pabpc49993.881Pygocentrus_nattereri
ENSCVAG00000019246pabpc410080.000ENSRNOG00000028592AABR07035074.19979.316Rattus_norvegicus
ENSCVAG00000019246pabpc410082.171ENSRNOG00000015642Pabpc49981.493Rattus_norvegicus
ENSCVAG00000019246pabpc410083.861ENSRBIG00000039761PABPC49983.625Rhinopithecus_bieti
ENSCVAG00000019246pabpc410083.861ENSRROG00000033355PABPC49983.625Rhinopithecus_roxellana
ENSCVAG00000019246pabpc410083.703ENSSBOG00000026193PABPC49983.466Saimiri_boliviensis_boliviensis
ENSCVAG00000019246pabpc49887.785ENSSHAG00000018139PABPC49986.422Sarcophilus_harrisii
ENSCVAG00000019246pabpc49990.789ENSSFOG00015023514pabpc49990.789Scleropages_formosus
ENSCVAG00000019246pabpc49995.603ENSSMAG00000009007pabpc49895.603Scophthalmus_maximus
ENSCVAG00000019246pabpc49996.552ENSSDUG00000012683pabpc49996.104Seriola_dumerili
ENSCVAG00000019246pabpc49996.552ENSSLDG00000013025pabpc49996.104Seriola_lalandi_dorsalis
ENSCVAG00000019246pabpc410074.734ENSSARG00000000310PABPC49873.820Sorex_araneus
ENSCVAG00000019246pabpc49987.419ENSSPUG00000003204PABPC49986.774Sphenodon_punctatus
ENSCVAG00000019246pabpc49996.552ENSSPAG00000009252pabpc49995.942Stegastes_partitus
ENSCVAG00000019246pabpc410083.861ENSSSCG00000003660-9983.625Sus_scrofa
ENSCVAG00000019246pabpc49044.425ENSSSCG00000036170-9644.425Sus_scrofa
ENSCVAG00000019246pabpc49981.887ENSTGUG00000001266PABPC49982.165Taeniopygia_guttata
ENSCVAG00000019246pabpc410094.968ENSTRUG00000005907pabpc49994.968Takifugu_rubripes
ENSCVAG00000019246pabpc410087.419ENSTNIG00000016902pabpc49987.500Tetraodon_nigroviridis
ENSCVAG00000019246pabpc49969.767ENSTBEG00000009035PABPC410068.937Tupaia_belangeri
ENSCVAG00000019246pabpc49960.105ENSTTRG00000014340PABPC410067.940Tursiops_truncatus
ENSCVAG00000019246pabpc410083.861ENSUAMG00000000303PABPC49983.784Ursus_americanus
ENSCVAG00000019246pabpc410082.456ENSUMAG00000019585PABPC49990.845Ursus_maritimus
ENSCVAG00000019246pabpc47770.606ENSVPAG00000010041PABPC47170.606Vicugna_pacos
ENSCVAG00000019246pabpc410083.861ENSVVUG00000005215PABPC49983.784Vulpes_vulpes
ENSCVAG00000019246pabpc46798.113ENSXETG00000027221-9898.113Xenopus_tropicalis
ENSCVAG00000019246pabpc49982.907ENSXETG00000010946pabpc49982.268Xenopus_tropicalis
ENSCVAG00000019246pabpc410095.423ENSXCOG00000013190pabpc49698.585Xiphophorus_couchianus
ENSCVAG00000019246pabpc410098.864ENSXMAG00000019007pabpc49998.864Xiphophorus_maculatus

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