EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000019250 (Gene tree)
Gene ID: 107087926
Gene Symbol: synj1
Alias: fb02f11|fi15a11|no optokinetic response c|nrc|slacker|slak|wu:fb02f11|wu:fi15a11
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 36402 bases
Position: chrKL652699.1:961270-997671
Accession: 107087926
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000030586	Exo_endo_phos	PF03372.23	7.9e-14	1	1
ENSCVAP00000016285	Exo_endo_phos	PF03372.23	1.1e-13	1	1
ENSCVAP00000030599	Exo_endo_phos	PF03372.23	1.1e-13	1	1
ENSCVAP00000030609	Exo_endo_phos	PF03372.23	1.1e-13	1	1
ENSCVAP00000030586	DUF1866	PF08952.11	3.5e-56	1	1
ENSCVAP00000016285	DUF1866	PF08952.11	4e-56	1	1
ENSCVAP00000030599	DUF1866	PF08952.11	4e-56	1	1
ENSCVAP00000030609	DUF1866	PF08952.11	4.1e-56	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000031865	-	7609	XM_015379771	ENSCVAP00000030586	1349 (aa)	XP_015235257	-
ENSCVAT00000024615	-	7592	XM_015379780	ENSCVAP00000016285	1556 (aa)	XP_015235266	-
ENSCVAT00000024665	-	7670	XM_015379773	ENSCVAP00000030609	1582 (aa)	XP_015235259	-
ENSCVAT00000024652	-	7628	-	ENSCVAP00000030599	1568 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000019250's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000019250's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000019250	synj1	100	66.594	ENSG00000159082	SYNJ1	100	80.337	Homo_sapiens
ENSCVAG00000019250	synj1	92	90.880	ENSAPOG00000002809	synj1	100	87.209	Acanthochromis_polyacanthus
ENSCVAG00000019250	synj1	94	67.496	ENSAMEG00000015028	SYNJ1	68	73.886	Ailuropoda_melanoleuca
ENSCVAG00000019250	synj1	99	86.760	ENSACIG00000008857	synj1	94	90.302	Amphilophus_citrinellus
ENSCVAG00000019250	synj1	99	87.915	ENSAOCG00000009835	synj1	100	87.310	Amphiprion_ocellaris
ENSCVAG00000019250	synj1	100	85.432	ENSAPEG00000021010	synj1	95	84.349	Amphiprion_percula
ENSCVAG00000019250	synj1	100	87.408	ENSATEG00000002306	synj1	95	83.698	Anabas_testudineus
ENSCVAG00000019250	synj1	90	68.157	ENSAPLG00000011832	SYNJ1	68	73.703	Anas_platyrhynchos
ENSCVAG00000019250	synj1	93	68.874	ENSACAG00000003006	-	84	74.311	Anolis_carolinensis
ENSCVAG00000019250	synj1	100	65.976	ENSANAG00000027325	SYNJ1	84	73.754	Aotus_nancymaae
ENSCVAG00000019250	synj1	100	88.742	ENSACLG00000002255	synj1	100	88.218	Astatotilapia_calliptera
ENSCVAG00000019250	synj1	99	79.941	ENSAMXG00000008208	synj1	94	73.430	Astyanax_mexicanus
ENSCVAG00000019250	synj1	95	70.054	ENSBTAG00000003063	SYNJ1	83	73.778	Bos_taurus
ENSCVAG00000019250	synj1	100	66.211	ENSCJAG00000009187	SYNJ1	84	73.778	Callithrix_jacchus
ENSCVAG00000019250	synj1	97	66.490	ENSCAFG00000009041	SYNJ1	86	72.405	Canis_familiaris
ENSCVAG00000019250	synj1	97	68.212	ENSCAFG00020025776	SYNJ1	78	74.366	Canis_lupus_dingo
ENSCVAG00000019250	synj1	99	68.521	ENSCHIG00000005095	SYNJ1	82	65.214	Capra_hircus
ENSCVAG00000019250	synj1	100	66.330	ENSTSYG00000014541	SYNJ1	85	73.577	Carlito_syrichta
ENSCVAG00000019250	synj1	84	72.137	ENSCAPG00000014483	SYNJ1	75	72.137	Cavia_aperea
ENSCVAG00000019250	synj1	95	69.002	ENSCPOG00000012182	SYNJ1	83	74.041	Cavia_porcellus
ENSCVAG00000019250	synj1	99	66.840	ENSCCAG00000020825	SYNJ1	84	73.665	Cebus_capucinus
ENSCVAG00000019250	synj1	100	65.939	ENSCATG00000033891	SYNJ1	86	73.292	Cercocebus_atys
ENSCVAG00000019250	synj1	93	67.376	ENSCLAG00000009796	SYNJ1	100	77.778	Chinchilla_lanigera
ENSCVAG00000019250	synj1	97	66.086	ENSCSAG00000009654	SYNJ1	83	73.932	Chlorocebus_sabaeus
ENSCVAG00000019250	synj1	77	72.727	ENSCHOG00000012390	SYNJ1	54	72.727	Choloepus_hoffmanni
ENSCVAG00000019250	synj1	90	72.397	ENSCPBG00000006402	SYNJ1	87	74.599	Chrysemys_picta_bellii
ENSCVAG00000019250	synj1	97	66.866	ENSCANG00000031359	SYNJ1	84	73.932	Colobus_angolensis_palliatus
ENSCVAG00000019250	synj1	93	69.773	ENSCGRG00001010861	Synj1	83	73.399	Cricetulus_griseus_chok1gshd
ENSCVAG00000019250	synj1	93	67.277	ENSCGRG00000015749	Synj1	100	77.092	Cricetulus_griseus_crigri
ENSCVAG00000019250	synj1	95	87.062	ENSCSEG00000019614	synj1	98	87.500	Cynoglossus_semilaevis
ENSCVAG00000019250	synj1	100	81.200	ENSDARG00000025011	synj1	100	79.298	Danio_rerio
ENSCVAG00000019250	synj1	93	64.808	ENSDNOG00000010732	SYNJ1	70	70.833	Dasypus_novemcinctus
ENSCVAG00000019250	synj1	54	77.366	ENSDORG00000014735	-	100	77.366	Dipodomys_ordii
ENSCVAG00000019250	synj1	83	75.214	ENSETEG00000018674	SYNJ1	59	75.214	Echinops_telfairi
ENSCVAG00000019250	synj1	99	68.759	ENSEASG00005006287	SYNJ1	98	74.649	Equus_asinus_asinus
ENSCVAG00000019250	synj1	99	68.300	ENSECAG00000004829	SYNJ1	86	73.149	Equus_caballus
ENSCVAG00000019250	synj1	91	66.041	ENSEEUG00000005150	SYNJ1	59	67.558	Erinaceus_europaeus
ENSCVAG00000019250	synj1	99	77.076	ENSELUG00000009731	synj1	95	81.713	Esox_lucius
ENSCVAG00000019250	synj1	99	67.572	ENSFCAG00000012498	SYNJ1	84	73.529	Felis_catus
ENSCVAG00000019250	synj1	79	54.452	ENSFALG00000004680	SYNJ1	61	70.210	Ficedula_albicollis
ENSCVAG00000019250	synj1	100	65.431	ENSFDAG00000016818	SYNJ1	100	77.641	Fukomys_damarensis
ENSCVAG00000019250	synj1	99	89.605	ENSFHEG00000017689	synj1	97	86.904	Fundulus_heteroclitus
ENSCVAG00000019250	synj1	80	83.382	ENSGMOG00000014852	synj1	80	83.382	Gadus_morhua
ENSCVAG00000019250	synj1	96	67.487	ENSGALG00000034317	SYNJ1	82	65.125	Gallus_gallus
ENSCVAG00000019250	synj1	99	88.847	ENSGAFG00000019466	synj1	95	88.484	Gambusia_affinis
ENSCVAG00000019250	synj1	99	79.898	ENSGACG00000020575	synj1	99	80.395	Gasterosteus_aculeatus
ENSCVAG00000019250	synj1	96	69.743	ENSGAGG00000022523	SYNJ1	82	74.731	Gopherus_agassizii
ENSCVAG00000019250	synj1	100	66.667	ENSGGOG00000015945	SYNJ1	86	73.381	Gorilla_gorilla
ENSCVAG00000019250	synj1	100	88.815	ENSHBUG00000007774	synj1	100	88.292	Haplochromis_burtoni
ENSCVAG00000019250	synj1	97	68.148	ENSHGLG00000006420	SYNJ1	100	77.366	Heterocephalus_glaber_female
ENSCVAG00000019250	synj1	97	66.541	ENSHGLG00100012591	SYNJ1	100	77.366	Heterocephalus_glaber_male
ENSCVAG00000019250	synj1	95	88.190	ENSHCOG00000012774	synj1	96	83.993	Hippocampus_comes
ENSCVAG00000019250	synj1	98	81.900	ENSIPUG00000010691	SYNJ1	83	80.148	Ictalurus_punctatus
ENSCVAG00000019250	synj1	96	66.741	ENSSTOG00000015806	SYNJ1	83	73.797	Ictidomys_tridecemlineatus
ENSCVAG00000019250	synj1	96	61.859	ENSJJAG00000020168	Synj1	68	68.182	Jaculus_jaculus
ENSCVAG00000019250	synj1	99	79.130	ENSKMAG00000004221	synj1	86	89.555	Kryptolebias_marmoratus
ENSCVAG00000019250	synj1	99	84.831	ENSLBEG00000015081	synj1	95	93.051	Labrus_bergylta
ENSCVAG00000019250	synj1	99	66.838	ENSLACG00000005928	SYNJ1	70	74.028	Latimeria_chalumnae
ENSCVAG00000019250	synj1	97	71.408	ENSLOCG00000009230	synj1	73	80.125	Lepisosteus_oculatus
ENSCVAG00000019250	synj1	97	65.976	ENSLAFG00000011806	SYNJ1	69	73.797	Loxodonta_africana
ENSCVAG00000019250	synj1	95	65.270	ENSMFAG00000018883	SYNJ1	84	72.669	Macaca_fascicularis
ENSCVAG00000019250	synj1	97	65.510	ENSMMUG00000004624	SYNJ1	83	73.647	Macaca_mulatta
ENSCVAG00000019250	synj1	97	66.517	ENSMNEG00000040077	SYNJ1	79	73.932	Macaca_nemestrina
ENSCVAG00000019250	synj1	97	67.269	ENSMLEG00000037029	SYNJ1	84	73.843	Mandrillus_leucophaeus
ENSCVAG00000019250	synj1	99	89.808	ENSMAMG00000013404	synj1	95	83.302	Mastacembelus_armatus
ENSCVAG00000019250	synj1	100	87.721	ENSMZEG00005024358	synj1	100	86.931	Maylandia_zebra
ENSCVAG00000019250	synj1	94	66.410	ENSMGAG00000014522	SYNJ1	82	62.870	Meleagris_gallopavo
ENSCVAG00000019250	synj1	93	67.582	ENSMAUG00000009743	Synj1	100	77.229	Mesocricetus_auratus
ENSCVAG00000019250	synj1	96	68.343	ENSMICG00000034953	SYNJ1	86	73.381	Microcebus_murinus
ENSCVAG00000019250	synj1	99	79.808	ENSMMOG00000010203	synj1	93	82.832	Mola_mola
ENSCVAG00000019250	synj1	88	67.122	ENSMODG00000021073	SYNJ1	78	71.496	Monodelphis_domestica
ENSCVAG00000019250	synj1	100	88.487	ENSMALG00000014015	synj1	95	83.155	Monopterus_albus
ENSCVAG00000019250	synj1	93	67.912	MGP_CAROLIEiJ_G0020951	Synj1	100	77.641	Mus_caroli
ENSCVAG00000019250	synj1	95	67.412	ENSMUSG00000022973	Synj1	100	77.503	Mus_musculus
ENSCVAG00000019250	synj1	93	67.553	MGP_PahariEiJ_G0016656	Synj1	100	77.503	Mus_pahari
ENSCVAG00000019250	synj1	95	67.412	MGP_SPRETEiJ_G0021857	Synj1	100	77.641	Mus_spretus
ENSCVAG00000019250	synj1	96	66.078	ENSMPUG00000001153	SYNJ1	70	73.097	Mustela_putorius_furo
ENSCVAG00000019250	synj1	52	76.387	ENSMLUG00000026584	-	100	76.387	Myotis_lucifugus
ENSCVAG00000019250	synj1	61	61.955	ENSMLUG00000005764	-	55	71.017	Myotis_lucifugus
ENSCVAG00000019250	synj1	100	65.357	ENSNGAG00000000453	Synj1	100	77.503	Nannospalax_galili
ENSCVAG00000019250	synj1	100	81.121	ENSNBRG00000011936	synj1	94	87.467	Neolamprologus_brichardi
ENSCVAG00000019250	synj1	84	65.051	ENSNLEG00000003734	SYNJ1	99	63.084	Nomascus_leucogenys
ENSCVAG00000019250	synj1	83	59.748	ENSMEUG00000004158	-	61	70.930	Notamacropus_eugenii
ENSCVAG00000019250	synj1	85	75.236	ENSOPRG00000013602	SYNJ1	63	75.236	Ochotona_princeps
ENSCVAG00000019250	synj1	54	77.915	ENSODEG00000002409	-	100	77.915	Octodon_degus
ENSCVAG00000019250	synj1	99	82.596	ENSONIG00000004667	synj1	95	80.367	Oreochromis_niloticus
ENSCVAG00000019250	synj1	96	65.491	ENSOANG00000006929	SYNJ1	69	71.781	Ornithorhynchus_anatinus
ENSCVAG00000019250	synj1	93	66.234	ENSOCUG00000001420	SYNJ1	67	75.117	Oryctolagus_cuniculus
ENSCVAG00000019250	synj1	100	87.675	ENSORLG00000004320	synj1	100	87.380	Oryzias_latipes
ENSCVAG00000019250	synj1	99	82.746	ENSORLG00020011994	synj1	98	82.019	Oryzias_latipes_hni
ENSCVAG00000019250	synj1	98	81.246	ENSORLG00015018077	synj1	90	81.854	Oryzias_latipes_hsok
ENSCVAG00000019250	synj1	100	85.029	ENSOMEG00000014322	synj1	99	86.317	Oryzias_melastigma
ENSCVAG00000019250	synj1	97	63.897	ENSOGAG00000006010	SYNJ1	68	70.719	Otolemur_garnettii
ENSCVAG00000019250	synj1	96	66.371	ENSOARG00000013414	SYNJ1	68	72.518	Ovis_aries
ENSCVAG00000019250	synj1	100	66.427	ENSPPAG00000026784	SYNJ1	84	74.021	Pan_paniscus
ENSCVAG00000019250	synj1	99	67.572	ENSPPRG00000023469	SYNJ1	84	73.529	Panthera_pardus
ENSCVAG00000019250	synj1	99	67.645	ENSPTIG00000007930	SYNJ1	84	73.619	Panthera_tigris_altaica
ENSCVAG00000019250	synj1	100	66.667	ENSPTRG00000023787	SYNJ1	86	73.381	Pan_troglodytes
ENSCVAG00000019250	synj1	100	66.667	ENSPTRG00000048135	-	86	73.381	Pan_troglodytes
ENSCVAG00000019250	synj1	97	66.517	ENSPANG00000022531	SYNJ1	84	73.932	Papio_anubis
ENSCVAG00000019250	synj1	86	80.626	ENSPKIG00000022603	synj1	89	82.212	Paramormyrops_kingsleyae
ENSCVAG00000019250	synj1	96	87.775	ENSPMGG00000016831	synj1	95	87.257	Periophthalmus_magnuspinnatus
ENSCVAG00000019250	synj1	100	65.146	ENSPEMG00000018767	Synj1	100	77.778	Peromyscus_maniculatus_bairdii
ENSCVAG00000019250	synj1	98	66.220	ENSPCIG00000016372	SYNJ1	83	72.316	Phascolarctos_cinereus
ENSCVAG00000019250	synj1	100	90.902	ENSPFOG00000016886	synj1	100	92.308	Poecilia_formosa
ENSCVAG00000019250	synj1	100	92.173	ENSPLAG00000017559	synj1	100	91.880	Poecilia_latipinna
ENSCVAG00000019250	synj1	99	92.793	ENSPMEG00000007643	synj1	95	89.771	Poecilia_mexicana
ENSCVAG00000019250	synj1	100	92.068	ENSPREG00000012412	synj1	100	92.291	Poecilia_reticulata
ENSCVAG00000019250	synj1	88	69.904	ENSPPYG00000011365	SYNJ1	78	73.754	Pongo_abelii
ENSCVAG00000019250	synj1	78	81.429	ENSPCAG00000009906	SYNJ1	58	81.429	Procavia_capensis
ENSCVAG00000019250	synj1	89	69.676	ENSPCOG00000024841	SYNJ1	95	69.930	Propithecus_coquereli
ENSCVAG00000019250	synj1	88	65.895	ENSPVAG00000000892	SYNJ1	69	69.840	Pteropus_vampyrus
ENSCVAG00000019250	synj1	100	85.777	ENSPNYG00000022989	synj1	100	83.726	Pundamilia_nyererei
ENSCVAG00000019250	synj1	83	86.400	ENSPNAG00000021119	synj1	91	86.311	Pygocentrus_nattereri
ENSCVAG00000019250	synj1	100	65.242	ENSRNOG00000002051	Synj1	85	73.998	Rattus_norvegicus
ENSCVAG00000019250	synj1	97	66.642	ENSRBIG00000034477	SYNJ1	84	73.843	Rhinopithecus_bieti
ENSCVAG00000019250	synj1	97	66.716	ENSRROG00000039256	SYNJ1	84	73.932	Rhinopithecus_roxellana
ENSCVAG00000019250	synj1	100	65.690	ENSSBOG00000021001	SYNJ1	84	73.754	Saimiri_boliviensis_boliviensis
ENSCVAG00000019250	synj1	95	65.991	ENSSHAG00000008538	SYNJ1	70	72.872	Sarcophilus_harrisii
ENSCVAG00000019250	synj1	99	81.490	ENSSFOG00015006095	synj1	94	71.366	Scleropages_formosus
ENSCVAG00000019250	synj1	99	87.389	ENSSMAG00000018066	synj1	98	87.111	Scophthalmus_maximus
ENSCVAG00000019250	synj1	99	83.867	ENSSDUG00000013058	synj1	95	84.347	Seriola_dumerili
ENSCVAG00000019250	synj1	100	86.992	ENSSLDG00000021406	synj1	100	87.528	Seriola_lalandi_dorsalis
ENSCVAG00000019250	synj1	94	69.332	ENSSPUG00000012552	SYNJ1	71	73.867	Sphenodon_punctatus
ENSCVAG00000019250	synj1	99	89.315	ENSSPAG00000017029	synj1	99	84.761	Stegastes_partitus
ENSCVAG00000019250	synj1	99	84.731	ENSSPAG00000006812	SYNJ1	99	85.232	Stegastes_partitus
ENSCVAG00000019250	synj1	98	67.456	ENSSSCG00000012035	SYNJ1	85	73.327	Sus_scrofa
ENSCVAG00000019250	synj1	100	66.498	ENSTGUG00000013445	SYNJ1	70	73.363	Taeniopygia_guttata
ENSCVAG00000019250	synj1	100	81.953	ENSTRUG00000006907	synj1	91	81.566	Takifugu_rubripes
ENSCVAG00000019250	synj1	99	76.686	ENSTNIG00000009940	synj1	98	75.431	Tetraodon_nigroviridis
ENSCVAG00000019250	synj1	85	81.818	ENSTBEG00000016298	SYNJ1	60	75.731	Tupaia_belangeri
ENSCVAG00000019250	synj1	92	76.109	ENSTTRG00000002222	SYNJ1	71	67.260	Tursiops_truncatus
ENSCVAG00000019250	synj1	96	67.868	ENSUAMG00000018606	SYNJ1	99	76.234	Ursus_americanus
ENSCVAG00000019250	synj1	92	74.443	ENSUMAG00000018419	SYNJ1	99	76.297	Ursus_maritimus
ENSCVAG00000019250	synj1	84	76.887	ENSVPAG00000001241	SYNJ1	58	81.429	Vicugna_pacos
ENSCVAG00000019250	synj1	100	65.456	ENSVVUG00000023125	SYNJ1	83	73.797	Vulpes_vulpes
ENSCVAG00000019250	synj1	95	65.507	ENSXETG00000009899	synj1	69	72.198	Xenopus_tropicalis
ENSCVAG00000019250	synj1	99	89.363	ENSXCOG00000011896	synj1	99	89.377	Xiphophorus_couchianus
ENSCVAG00000019250	synj1	100	93.699	ENSXMAG00000017524	synj1	100	94.292	Xiphophorus_maculatus