EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000019349 (Gene tree)
Gene ID: 107098143
Gene Symbol: rbm4.1
Alias: rbm4|wu:fc31f07|wu:fc57h11
Full Name: RNA-binding protein 4.1-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 8580 bases
Position: chrKL653250.1:74619-83198
Accession: 107098143
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000030659	zf-CCHC	PF00098.23	5.1e-08	1	1
ENSCVAP00000030659	RRM_5	PF13893.6	5.9e-08	1	1
ENSCVAP00000030659	RRM_1	PF00076.22	4.2e-31	1	2
ENSCVAP00000030659	RRM_1	PF00076.22	4.2e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000024766	-	2132	XM_015395627	ENSCVAP00000030659	417 (aa)	XP_015251113	UPI000742734F

Gene Model

Click here to download ENSCVAG00000019349's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000019349's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000019349	rbm4.1	65	54.305	ENSCVAG00000008508	rbm4.3	97	38.955
ENSCVAG00000019349	rbm4.1	64	52.381	ENSCVAG00000008502	rbm4.3	97	37.709

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000019349	rbm4.1	100	80.285	ENSAPOG00000012353	rbm4.1	100	80.285	Acanthochromis_polyacanthus
ENSCVAG00000019349	rbm4.1	100	79.335	ENSACIG00000016482	rbm4.1	100	79.335	Amphilophus_citrinellus
ENSCVAG00000019349	rbm4.1	100	80.760	ENSAOCG00000010915	rbm4.1	100	80.760	Amphiprion_ocellaris
ENSCVAG00000019349	rbm4.1	100	80.760	ENSAPEG00000009494	rbm4.1	100	80.760	Amphiprion_percula
ENSCVAG00000019349	rbm4.1	100	79.810	ENSATEG00000001904	rbm4.1	100	79.810	Anabas_testudineus
ENSCVAG00000019349	rbm4.1	100	78.385	ENSACLG00000007722	rbm4.1	100	78.385	Astatotilapia_calliptera
ENSCVAG00000019349	rbm4.1	96	48.889	ENSACLG00000007740	-	94	45.409	Astatotilapia_calliptera
ENSCVAG00000019349	rbm4.1	100	61.045	ENSAMXG00000036611	rbm4.1	100	61.758	Astyanax_mexicanus
ENSCVAG00000019349	rbm4.1	94	49.015	ENSCSEG00000014359	-	94	48.900	Cynoglossus_semilaevis
ENSCVAG00000019349	rbm4.1	100	70.000	ENSCSEG00000014365	rbm4.1	100	70.000	Cynoglossus_semilaevis
ENSCVAG00000019349	rbm4.1	100	64.720	ENSDARG00000036386	rbm4.1	100	64.706	Danio_rerio
ENSCVAG00000019349	rbm4.1	100	49.645	ENSDARG00000055080	rbm4.2	100	48.941	Danio_rerio
ENSCVAG00000019349	rbm4.1	100	62.648	ENSELUG00000013205	rbm4.1	100	63.146	Esox_lucius
ENSCVAG00000019349	rbm4.1	100	87.799	ENSFHEG00000022926	rbm4.1	100	87.321	Fundulus_heteroclitus
ENSCVAG00000019349	rbm4.1	100	64.762	ENSGMOG00000007464	rbm4.1	100	66.667	Gadus_morhua
ENSCVAG00000019349	rbm4.1	92	50.895	ENSGMOG00000007455	-	92	49.876	Gadus_morhua
ENSCVAG00000019349	rbm4.1	100	86.396	ENSGAFG00000019302	rbm4.1	100	85.680	Gambusia_affinis
ENSCVAG00000019349	rbm4.1	99	85.922	ENSGACG00000000822	rbm4.1	100	90.104	Gasterosteus_aculeatus
ENSCVAG00000019349	rbm4.1	90	50.526	ENSGACG00000000821	-	90	50.526	Gasterosteus_aculeatus
ENSCVAG00000019349	rbm4.1	100	78.385	ENSHBUG00000011610	rbm4.1	100	78.385	Haplochromis_burtoni
ENSCVAG00000019349	rbm4.1	92	67.352	ENSHCOG00000011403	rbm4.1	95	67.692	Hippocampus_comes
ENSCVAG00000019349	rbm4.1	100	60.820	ENSIPUG00000022931	rbm4.1	100	60.998	Ictalurus_punctatus
ENSCVAG00000019349	rbm4.1	100	48.456	ENSIPUG00000022937	rbm4.2	100	47.418	Ictalurus_punctatus
ENSCVAG00000019349	rbm4.1	100	80.952	ENSKMAG00000006556	rbm4.1	100	81.667	Kryptolebias_marmoratus
ENSCVAG00000019349	rbm4.1	95	49.751	ENSLBEG00000019756	-	90	60.256	Labrus_bergylta
ENSCVAG00000019349	rbm4.1	100	77.381	ENSLBEG00000019782	rbm4.1	100	77.381	Labrus_bergylta
ENSCVAG00000019349	rbm4.1	99	50.711	ENSMAMG00000001760	-	100	47.907	Mastacembelus_armatus
ENSCVAG00000019349	rbm4.1	100	80.048	ENSMAMG00000001765	rbm4.1	100	80.048	Mastacembelus_armatus
ENSCVAG00000019349	rbm4.1	100	78.385	ENSMZEG00005009205	rbm4.1	100	78.385	Maylandia_zebra
ENSCVAG00000019349	rbm4.1	100	77.123	ENSMMOG00000020479	rbm4.1	100	77.123	Mola_mola
ENSCVAG00000019349	rbm4.1	95	50.500	ENSMALG00000020557	-	94	49.510	Monopterus_albus
ENSCVAG00000019349	rbm4.1	100	80.714	ENSMALG00000020544	rbm4.1	100	80.714	Monopterus_albus
ENSCVAG00000019349	rbm4.1	100	78.385	ENSNBRG00000017755	rbm4.1	100	78.385	Neolamprologus_brichardi
ENSCVAG00000019349	rbm4.1	100	78.147	ENSONIG00000015730	rbm4.1	100	78.147	Oreochromis_niloticus
ENSCVAG00000019349	rbm4.1	100	77.751	ENSORLG00000012496	rbm4.1	100	77.751	Oryzias_latipes
ENSCVAG00000019349	rbm4.1	100	77.751	ENSORLG00020012454	rbm4.1	100	77.751	Oryzias_latipes_hni
ENSCVAG00000019349	rbm4.1	100	77.990	ENSORLG00015013678	rbm4.1	100	77.990	Oryzias_latipes_hsok
ENSCVAG00000019349	rbm4.1	100	78.230	ENSOMEG00000001001	rbm4.1	100	78.230	Oryzias_melastigma
ENSCVAG00000019349	rbm4.1	100	60.514	ENSPKIG00000020805	rbm4.1	85	79.710	Paramormyrops_kingsleyae
ENSCVAG00000019349	rbm4.1	99	47.017	ENSPFOG00000012685	-	99	46.860	Poecilia_formosa
ENSCVAG00000019349	rbm4.1	100	86.396	ENSPFOG00000012675	rbm4.1	100	85.680	Poecilia_formosa
ENSCVAG00000019349	rbm4.1	100	86.396	ENSPLAG00000018572	rbm4.1	100	85.680	Poecilia_latipinna
ENSCVAG00000019349	rbm4.1	100	86.396	ENSPMEG00000006290	rbm4.1	100	85.680	Poecilia_mexicana
ENSCVAG00000019349	rbm4.1	99	44.337	ENSPREG00000003764	-	84	69.714	Poecilia_reticulata
ENSCVAG00000019349	rbm4.1	100	86.396	ENSPREG00000003724	rbm4.1	100	85.680	Poecilia_reticulata
ENSCVAG00000019349	rbm4.1	100	78.385	ENSPNYG00000004662	rbm4.1	100	78.385	Pundamilia_nyererei
ENSCVAG00000019349	rbm4.1	100	63.294	ENSPNAG00000002539	rbm4.1	100	64.569	Pygocentrus_nattereri
ENSCVAG00000019349	rbm4.1	100	51.422	ENSPNAG00000013057	rbm4.2	100	50.118	Pygocentrus_nattereri
ENSCVAG00000019349	rbm4.1	100	60.698	ENSSFOG00015021996	sf1	100	62.150	Scleropages_formosus
ENSCVAG00000019349	rbm4.1	100	76.429	ENSSMAG00000007571	rbm4.1	100	74.762	Scophthalmus_maximus
ENSCVAG00000019349	rbm4.1	94	51.889	ENSSDUG00000003936	-	94	50.369	Seriola_dumerili
ENSCVAG00000019349	rbm4.1	100	79.669	ENSSDUG00000003925	rbm4.1	100	80.048	Seriola_dumerili
ENSCVAG00000019349	rbm4.1	94	50.886	ENSSLDG00000013157	-	94	50.617	Seriola_lalandi_dorsalis
ENSCVAG00000019349	rbm4.1	100	79.669	ENSSLDG00000013147	rbm4.1	100	80.048	Seriola_lalandi_dorsalis
ENSCVAG00000019349	rbm4.1	99	47.115	ENSSPAG00000019046	-	99	45.933	Stegastes_partitus
ENSCVAG00000019349	rbm4.1	100	80.332	ENSSPAG00000019053	rbm4.1	100	81.043	Stegastes_partitus
ENSCVAG00000019349	rbm4.1	100	73.095	ENSTRUG00000013334	rbm4.1	100	71.429	Takifugu_rubripes
ENSCVAG00000019349	rbm4.1	99	46.988	ENSTRUG00000013328	-	99	45.561	Takifugu_rubripes
ENSCVAG00000019349	rbm4.1	94	47.980	ENSTNIG00000000316	-	94	46.359	Tetraodon_nigroviridis
ENSCVAG00000019349	rbm4.1	100	87.019	ENSTNIG00000004821	rbm4.1	100	91.282	Tetraodon_nigroviridis
ENSCVAG00000019349	rbm4.1	100	85.919	ENSXCOG00000003731	rbm4.1	100	85.203	Xiphophorus_couchianus
ENSCVAG00000019349	rbm4.1	99	47.470	ENSXMAG00000008059	-	86	71.779	Xiphophorus_maculatus
ENSCVAG00000019349	rbm4.1	100	86.158	ENSXMAG00000008069	rbm4.1	100	85.442	Xiphophorus_maculatus