EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSCVAG00000019385 (Gene tree)
Gene ID: 107104569
Gene Symbol: zgc:153115
Alias: klf14|klf16|wu:fc41a09|wu:fi22b08|zgc:152867
Full Name: tRNA splicing endonuclease subunit 15
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 15328 bases
Position: chrKL654295.1:50285-65612
Accession: 107104568
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000016435	Sen15	PF09631.10	9.7e-17	1	1
ENSCVAP00000030675	zf-C2H2	PF00096.26	7.1e-15	1	3
ENSCVAP00000030675	zf-C2H2	PF00096.26	7.1e-15	2	3
ENSCVAP00000030675	zf-C2H2	PF00096.26	7.1e-15	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000024819	-	1808	XM_015404587	ENSCVAP00000016435	213 (aa)	XP_015260073	-
ENSCVAT00000024802	-	4885	XM_015404588	ENSCVAP00000030675	242 (aa)	XP_015260074	UPI0007427E62

Gene Model

Click here to download ENSCVAG00000019385's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000019385's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000019385	zgc:153115	50	44.737	ENSCVAG00000020745	-	58	47.126
ENSCVAG00000019385	zgc:153115	58	40.860	ENSCVAG00000022685	-	51	40.860
ENSCVAG00000019385	zgc:153115	52	47.692	ENSCVAG00000000419	-	55	47.692
ENSCVAG00000019385	zgc:153115	55	45.098	ENSCVAG00000012543	-	81	48.276
ENSCVAG00000019385	zgc:153115	53	50.000	ENSCVAG00000020119	-	72	50.000
ENSCVAG00000019385	zgc:153115	60	46.154	ENSCVAG00000021107	-	71	42.857