EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000019389 (Gene tree)
Gene ID: 107087928
Gene Symbol: -
Alias: -
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 28437 bases
Position: chrKL652699.1:860470-888906
Accession: 107087928
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000030676	RRM_1	PF00076.22	1.7e-07	1	1
ENSCVAP00000016433	RRM_1	PF00076.22	1.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000024904	-	5700	-	ENSCVAP00000016433	1192 (aa)	-	-
ENSCVAT00000024803	-	5481	XM_015379783	ENSCVAP00000030676	1215 (aa)	XP_015235269	UPI00074296A7

Gene Model

Click here to download ENSCVAG00000019389's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000019389's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000019389	-	61	80.811	ENSACLG00000002010	-	67	79.140	Astatotilapia_calliptera
ENSCVAG00000019389	-	54	56.474	ENSFALG00000008076	-	64	56.110	Ficedula_albicollis
ENSCVAG00000019389	-	99	81.326	ENSPLAG00000017417	-	65	85.732	Poecilia_latipinna
ENSCVAG00000019389	-	61	86.193	ENSPMEG00000017911	-	66	85.115	Poecilia_mexicana
ENSCVAG00000019389	-	62	86.316	ENSPMEG00000007437	-	64	85.250	Poecilia_mexicana
ENSCVAG00000019389	-	67	85.450	ENSPREG00000012680	-	65	85.250	Poecilia_reticulata
ENSCVAG00000019389	-	91	81.216	ENSPNYG00000023102	-	67	79.531	Pundamilia_nyererei
ENSCVAG00000019389	-	61	81.696	ENSSPAG00000006625	-	66	79.714	Stegastes_partitus
ENSCVAG00000019389	-	62	87.237	ENSXMAG00000003256	-	66	86.125	Xiphophorus_maculatus