EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCVAG00000019431 (Gene tree)
Gene ID
107090245
Gene Symbol
rpa1
Alias
wu:fi14b08|zgc:55337|zgc:77092
Full Name
replication protein A1
Gene Type
protein_coding
Species
Cyprinodon_variegatus
Status
putative
Strand
Minus strand
Length
28705 bases
Position
chrKL652514.1:1663241-1691945
Accession
107090245
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCVAP00000030660tRNA_anti-codonPF01336.252.1e-1211
ENSCVAP00000016427tRNA_anti-codonPF01336.252.7e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCVAT00000024778-1671-ENSCVAP00000030660556 (aa)--
ENSCVAT00000031913-2884XM_015383522ENSCVAP00000016427606 (aa)XP_015239008UPI000742C29B
Gene Model
Click here to download ENSCVAG00000019431's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000019431's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCVAG00000019431rpa18969.231ENSCVAG00000013446-7968.735
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCVAG00000019431rpa19269.676ENSAPOG00000019409RPA18069.676Acanthochromis_polyacanthus
ENSCVAG00000019431rpa19983.471ENSAPOG00000011658rpa19983.306Acanthochromis_polyacanthus
ENSCVAG00000019431rpa19964.161ENSAMEG00000007706RPA19862.890Ailuropoda_melanoleuca
ENSCVAG00000019431rpa19963.112ENSACIG00000012881RPA19962.862Amphilophus_citrinellus
ENSCVAG00000019431rpa19974.240ENSACIG00000007277rpa19976.117Amphilophus_citrinellus
ENSCVAG00000019431rpa19982.781ENSAOCG00000023376rpa19982.450Amphiprion_ocellaris
ENSCVAG00000019431rpa19960.297ENSAOCG00000009003RPA19958.605Amphiprion_ocellaris
ENSCVAG00000019431rpa19957.879ENSAPEG00000019132RPA19455.878Amphiprion_percula
ENSCVAG00000019431rpa19982.947ENSAPEG00000008634rpa19982.616Amphiprion_percula
ENSCVAG00000019431rpa19960.984ENSATEG00000006443RPA19959.938Anabas_testudineus
ENSCVAG00000019431rpa110084.353ENSATEG00000022024rpa19884.353Anabas_testudineus
ENSCVAG00000019431rpa19954.334ENSAPLG00000012442RPA19954.720Anas_platyrhynchos
ENSCVAG00000019431rpa19957.857ENSACAG00000014490RPA19857.591Anolis_carolinensis
ENSCVAG00000019431rpa19965.225ENSANAG00000023456RPA19863.406Aotus_nancymaae
ENSCVAG00000019431rpa19962.248ENSACLG00000005223RPA19960.630Astatotilapia_calliptera
ENSCVAG00000019431rpa19985.405ENSACLG00000006640rpa19985.405Astatotilapia_calliptera
ENSCVAG00000019431rpa110076.259ENSAMXG00000008418rpa19976.529Astyanax_mexicanus
ENSCVAG00000019431rpa19963.415ENSBTAG00000009711RPA19962.662Bos_taurus
ENSCVAG00000019431rpa17732.719WBGene00017546rpa-16532.719Caenorhabditis_elegans
ENSCVAG00000019431rpa19963.287ENSCJAG00000001848RPA19962.745Callithrix_jacchus
ENSCVAG00000019431rpa19963.636ENSCAFG00000019249RPA19963.132Canis_familiaris
ENSCVAG00000019431rpa19963.636ENSCAFG00020009847RPA19963.132Canis_lupus_dingo
ENSCVAG00000019431rpa19963.573ENSCHIG00000026308RPA19962.927Capra_hircus
ENSCVAG00000019431rpa19963.972ENSTSYG00000003482-9962.255Carlito_syrichta
ENSCVAG00000019431rpa19964.223ENSCPOG00000000035RPA19962.890Cavia_porcellus
ENSCVAG00000019431rpa19953.147ENSCCAG00000010981RPA19952.941Cebus_capucinus
ENSCVAG00000019431rpa19964.510ENSCLAG00000005185-9963.054Chinchilla_lanigera
ENSCVAG00000019431rpa19960.315ENSCLAG00000015045-9959.211Chinchilla_lanigera
ENSCVAG00000019431rpa19953.833ENSCSAG00000013833RPA19953.595Chlorocebus_sabaeus
ENSCVAG00000019431rpa19962.148ENSCHOG00000013540-9963.077Choloepus_hoffmanni
ENSCVAG00000019431rpa17871.198ENSCHOG00000009454-9971.198Choloepus_hoffmanni
ENSCVAG00000019431rpa19964.274ENSCPBG00000020377RPA19965.149Chrysemys_picta_bellii
ENSCVAG00000019431rpa19943.257ENSCING00000023482-9942.857Ciona_intestinalis
ENSCVAG00000019431rpa19965.530ENSCANG00000030911RPA19962.963Colobus_angolensis_palliatus
ENSCVAG00000019431rpa19964.747ENSCGRG00001008197Rpa19963.149Cricetulus_griseus_chok1gshd
ENSCVAG00000019431rpa17872.082ENSCGRG00000000582Rpa19964.427Cricetulus_griseus_crigri
ENSCVAG00000019431rpa19956.678ENSCSEG00000012726RPA19956.873Cynoglossus_semilaevis
ENSCVAG00000019431rpa110079.310ENSCSEG00000013066rpa110079.112Cynoglossus_semilaevis
ENSCVAG00000019431rpa110073.712ENSDARG00000003938rpa19974.050Danio_rerio
ENSCVAG00000019431rpa19964.437ENSDNOG00000017218RPA19864.298Dasypus_novemcinctus
ENSCVAG00000019431rpa19964.789ENSDORG00000006199Rpa19963.725Dipodomys_ordii
ENSCVAG00000019431rpa19941.696FBgn0010173RpA-709941.340Drosophila_melanogaster
ENSCVAG00000019431rpa18275.789ENSETEG00000017608RPA18275.789Echinops_telfairi
ENSCVAG00000019431rpa19965.225ENSEASG00005009372RPA19964.098Equus_asinus_asinus
ENSCVAG00000019431rpa19963.732ENSECAG00000023886RPA19963.547Equus_caballus
ENSCVAG00000019431rpa17571.360ENSEEUG00000002186-6871.360Erinaceus_europaeus
ENSCVAG00000019431rpa19978.938ENSELUG00000021071rpa19978.289Esox_lucius
ENSCVAG00000019431rpa19562.313ENSELUG00000006136RPA19962.430Esox_lucius
ENSCVAG00000019431rpa19963.525ENSFCAG00000006306RPA19963.295Felis_catus
ENSCVAG00000019431rpa19964.274ENSFALG00000006575RPA19963.295Ficedula_albicollis
ENSCVAG00000019431rpa19964.187ENSFDAG00000007720RPA19963.218Fukomys_damarensis
ENSCVAG00000019431rpa110087.398ENSFHEG00000003580rpa110087.234Fundulus_heteroclitus
ENSCVAG00000019431rpa19976.895ENSGMOG00000010382rpa19974.709Gadus_morhua
ENSCVAG00000019431rpa19963.383ENSGALG00000003072RPA19963.218Gallus_gallus
ENSCVAG00000019431rpa110090.115ENSGAFG00000012916rpa110089.951Gambusia_affinis
ENSCVAG00000019431rpa19959.641ENSGAFG00000020953RPA19958.600Gambusia_affinis
ENSCVAG00000019431rpa110080.624ENSGACG00000010856rpa110080.131Gasterosteus_aculeatus
ENSCVAG00000019431rpa19963.796ENSGAGG00000013611RPA19963.622Gopherus_agassizii
ENSCVAG00000019431rpa19965.889ENSGGOG00000014186RPA19963.036Gorilla_gorilla
ENSCVAG00000019431rpa19958.615ENSHBUG00000009348RPA19857.290Haplochromis_burtoni
ENSCVAG00000019431rpa19986.139ENSHBUG00000017773rpa19985.974Haplochromis_burtoni
ENSCVAG00000019431rpa19964.675ENSHGLG00000008846RPA19964.039Heterocephalus_glaber_female
ENSCVAG00000019431rpa19960.558ENSHGLG00100000799-9960.427Heterocephalus_glaber_male
ENSCVAG00000019431rpa19964.675ENSHGLG00100017755-9964.039Heterocephalus_glaber_male
ENSCVAG00000019431rpa19954.930ENSHGLG00100002005-9953.366Heterocephalus_glaber_male
ENSCVAG00000019431rpa110074.026ENSHCOG00000001401rpa110073.864Hippocampus_comes
ENSCVAG00000019431rpa19946.057ENSHCOG00000000351RPA19844.463Hippocampus_comes
ENSCVAG00000019431rpa19975.748ENSIPUG00000004400rpa19975.748Ictalurus_punctatus
ENSCVAG00000019431rpa19862.522ENSSTOG00000022475RPA19563.908Ictidomys_tridecemlineatus
ENSCVAG00000019431rpa19964.623ENSJJAG00000000876Rpa19864.407Jaculus_jaculus
ENSCVAG00000019431rpa19961.744ENSKMAG00000000234RPA19960.000Kryptolebias_marmoratus
ENSCVAG00000019431rpa110083.797ENSKMAG00000005605rpa110083.797Kryptolebias_marmoratus
ENSCVAG00000019431rpa19981.139ENSLBEG00000021604rpa19980.820Labrus_bergylta
ENSCVAG00000019431rpa19968.182ENSLBEG00000002281RPA17968.578Labrus_bergylta
ENSCVAG00000019431rpa18263.812ENSLACG00000007210RPA19463.812Latimeria_chalumnae
ENSCVAG00000019431rpa19972.857ENSLOCG00000006397rpa19971.808Lepisosteus_oculatus
ENSCVAG00000019431rpa19963.605ENSLAFG00000015354RPA19663.545Loxodonta_africana
ENSCVAG00000019431rpa18261.522ENSMFAG00000036138-9861.368Macaca_fascicularis
ENSCVAG00000019431rpa19964.261ENSMMUG00000011604-9963.306Macaca_mulatta
ENSCVAG00000019431rpa19959.858ENSMMUG00000002442-9957.921Macaca_mulatta
ENSCVAG00000019431rpa18665.342ENSMNEG00000029837-9665.342Macaca_nemestrina
ENSCVAG00000019431rpa19963.908ENSMNEG00000031632-9863.884Macaca_nemestrina
ENSCVAG00000019431rpa19960.139ENSMLEG00000038768-9860.101Mandrillus_leucophaeus
ENSCVAG00000019431rpa110084.818ENSMAMG00000017993rpa110084.653Mastacembelus_armatus
ENSCVAG00000019431rpa19569.838ENSMAMG00000020097RPA18568.304Mastacembelus_armatus
ENSCVAG00000019431rpa19962.248ENSMZEG00005024731RPA19960.630Maylandia_zebra
ENSCVAG00000019431rpa19985.809ENSMZEG00005007551rpa19985.644Maylandia_zebra
ENSCVAG00000019431rpa19962.653ENSMGAG00000005315RPA19862.459Meleagris_gallopavo
ENSCVAG00000019431rpa19964.613ENSMAUG00000010474Rpa19864.527Mesocricetus_auratus
ENSCVAG00000019431rpa19964.336ENSMICG00000012867RPA19963.889Microcebus_murinus
ENSCVAG00000019431rpa19963.908ENSMOCG00000013019Rpa19963.011Microtus_ochrogaster
ENSCVAG00000019431rpa19963.243ENSMMOG00000010868RPA19867.506Mola_mola
ENSCVAG00000019431rpa110080.680ENSMMOG00000014292rpa110081.741Mola_mola
ENSCVAG00000019431rpa110063.668ENSMODG00000010549RPA19964.052Monodelphis_domestica
ENSCVAG00000019431rpa19969.108ENSMALG00000001208RPA17769.108Monopterus_albus
ENSCVAG00000019431rpa110085.479ENSMALG00000011453rpa110085.314Monopterus_albus
ENSCVAG00000019431rpa19963.398MGP_CAROLIEiJ_G0016734Rpa19962.866Mus_caroli
ENSCVAG00000019431rpa19963.322ENSMUSG00000000751Rpa19962.097Mus_musculus
ENSCVAG00000019431rpa19964.111MGP_PahariEiJ_G0017871Rpa19963.371Mus_pahari
ENSCVAG00000019431rpa19963.149MGP_SPRETEiJ_G0017577Rpa19961.997Mus_spretus
ENSCVAG00000019431rpa19963.462ENSMPUG00000013119RPA19962.908Mustela_putorius_furo
ENSCVAG00000019431rpa19963.398ENSMLUG00000006113RPA19563.912Myotis_lucifugus
ENSCVAG00000019431rpa19964.098ENSNGAG00000004522Rpa19364.395Nannospalax_galili
ENSCVAG00000019431rpa19960.932ENSNBRG00000009672RPA19759.635Neolamprologus_brichardi
ENSCVAG00000019431rpa19985.045ENSNBRG00000020595rpa19984.146Neolamprologus_brichardi
ENSCVAG00000019431rpa19964.261ENSNLEG00000017149RPA19963.399Nomascus_leucogenys
ENSCVAG00000019431rpa19954.878ENSMEUG00000006714RPA19756.081Notamacropus_eugenii
ENSCVAG00000019431rpa19962.392ENSODEG00000009038RPA19662.857Octodon_degus
ENSCVAG00000019431rpa19984.466ENSONIG00000013135rpa19984.304Oreochromis_niloticus
ENSCVAG00000019431rpa110064.818ENSOANG00000010880RPA19964.026Ornithorhynchus_anatinus
ENSCVAG00000019431rpa19961.240ENSOCUG00000001504RPA19960.870Oryctolagus_cuniculus
ENSCVAG00000019431rpa19956.923ENSORLG00000003368RPA19956.154Oryzias_latipes
ENSCVAG00000019431rpa19983.940ENSORLG00000004856rpa19983.940Oryzias_latipes
ENSCVAG00000019431rpa19983.940ENSORLG00020008980rpa19983.940Oryzias_latipes_hni
ENSCVAG00000019431rpa19565.854ENSORLG00020015284RPA19953.474Oryzias_latipes_hni
ENSCVAG00000019431rpa17465.394ENSORLG00015005867-9665.394Oryzias_latipes_hsok
ENSCVAG00000019431rpa19957.930ENSORLG00015020383RPA19957.053Oryzias_latipes_hsok
ENSCVAG00000019431rpa19983.940ENSORLG00015013982rpa19983.940Oryzias_latipes_hsok
ENSCVAG00000019431rpa19959.187ENSOMEG00000011040RPA19958.957Oryzias_melastigma
ENSCVAG00000019431rpa19979.967ENSOMEG00000004704rpa19979.967Oryzias_melastigma
ENSCVAG00000019431rpa17576.111ENSOGAG00000029379-9876.111Otolemur_garnettii
ENSCVAG00000019431rpa19963.732ENSOGAG00000005581-9963.072Otolemur_garnettii
ENSCVAG00000019431rpa19963.573ENSOARG00000014479RPA19962.927Ovis_aries
ENSCVAG00000019431rpa19964.789ENSPPAG00000039680RPA19963.889Pan_paniscus
ENSCVAG00000019431rpa19963.351ENSPPRG00000011807RPA19963.235Panthera_pardus
ENSCVAG00000019431rpa19963.351ENSPTIG00000007898RPA19963.132Panthera_tigris_altaica
ENSCVAG00000019431rpa19964.965ENSPTRG00000008539RPA19964.052Pan_troglodytes
ENSCVAG00000019431rpa19964.437ENSPANG00000024592RPA19963.235Papio_anubis
ENSCVAG00000019431rpa19972.204ENSPKIG00000008053rpa19872.533Paramormyrops_kingsleyae
ENSCVAG00000019431rpa19964.148ENSPSIG00000015617RPA19864.755Pelodiscus_sinensis
ENSCVAG00000019431rpa19981.408ENSPMGG00000011589rpa19977.704Periophthalmus_magnuspinnatus
ENSCVAG00000019431rpa19962.950ENSPMGG00000000543RPA19962.950Periophthalmus_magnuspinnatus
ENSCVAG00000019431rpa19964.448ENSPEMG00000021061Rpa19963.889Peromyscus_maniculatus_bairdii
ENSCVAG00000019431rpa19964.236ENSPCIG00000019049RPA19963.666Phascolarctos_cinereus
ENSCVAG00000019431rpa110090.280ENSPFOG00000003987rpa110090.115Poecilia_formosa
ENSCVAG00000019431rpa19460.243ENSPLAG00000008844-9758.805Poecilia_latipinna
ENSCVAG00000019431rpa110090.280ENSPLAG00000004984rpa110090.115Poecilia_latipinna
ENSCVAG00000019431rpa18968.990ENSPMEG00000003627-9657.861Poecilia_mexicana
ENSCVAG00000019431rpa110090.445ENSPMEG00000020602rpa110090.280Poecilia_mexicana
ENSCVAG00000019431rpa19568.904ENSPREG00000010119RPA18368.904Poecilia_reticulata
ENSCVAG00000019431rpa19381.239ENSPREG00000010174rpa19580.919Poecilia_reticulata
ENSCVAG00000019431rpa19964.851ENSPCOG00000001799RPA19963.132Propithecus_coquereli
ENSCVAG00000019431rpa19963.222ENSPVAG00000002149RPA19962.908Pteropus_vampyrus
ENSCVAG00000019431rpa19986.139ENSPNYG00000016316rpa19985.974Pundamilia_nyererei
ENSCVAG00000019431rpa19962.081ENSPNYG00000024165RPA19960.472Pundamilia_nyererei
ENSCVAG00000019431rpa110067.986ENSPNAG00000008599rpa19966.124Pygocentrus_nattereri
ENSCVAG00000019431rpa19972.330ENSRNOG00000003123Rpa19964.052Rattus_norvegicus
ENSCVAG00000019431rpa19964.437ENSRBIG00000036587RPA19962.908Rhinopithecus_bieti
ENSCVAG00000019431rpa19959.331ENSRROG00000043278RPA19958.007Rhinopithecus_roxellana
ENSCVAG00000019431rpa19431.419YAR007CRFA17237.111Saccharomyces_cerevisiae
ENSCVAG00000019431rpa19764.171ENSSBOG00000030233RPA19665.412Saimiri_boliviensis_boliviensis
ENSCVAG00000019431rpa19964.818ENSSHAG00000007969RPA19564.587Sarcophilus_harrisii
ENSCVAG00000019431rpa110078.723ENSSFOG00015005362rpa19277.815Scleropages_formosus
ENSCVAG00000019431rpa19368.374ENSSMAG00000019746RPA18568.374Scophthalmus_maximus
ENSCVAG00000019431rpa110084.653ENSSDUG00000011949rpa110084.653Seriola_dumerili
ENSCVAG00000019431rpa19371.363ENSSDUG00000016358RPA18271.005Seriola_dumerili
ENSCVAG00000019431rpa110084.818ENSSLDG00000011806rpa110084.818Seriola_lalandi_dorsalis
ENSCVAG00000019431rpa19371.132ENSSLDG00000020784RPA18270.776Seriola_lalandi_dorsalis
ENSCVAG00000019431rpa18878.788ENSSARG00000007506RPA18778.788Sorex_araneus
ENSCVAG00000019431rpa110062.324ENSSPUG00000007223RPA19962.121Sphenodon_punctatus
ENSCVAG00000019431rpa19965.405ENSSPAG00000011165RPA19962.775Stegastes_partitus
ENSCVAG00000019431rpa110083.993ENSSPAG00000009903rpa110083.663Stegastes_partitus
ENSCVAG00000019431rpa19965.233ENSSSCG00000017822RPA19964.034Sus_scrofa
ENSCVAG00000019431rpa19963.339ENSTGUG00000005775RPA19962.684Taeniopygia_guttata
ENSCVAG00000019431rpa19369.697ENSTRUG00000000405RPA17769.266Takifugu_rubripes
ENSCVAG00000019431rpa19980.396ENSTRUG00000003616rpa19980.100Takifugu_rubripes
ENSCVAG00000019431rpa110082.168ENSTNIG00000016199rpa19981.981Tetraodon_nigroviridis
ENSCVAG00000019431rpa17870.938ENSTBEG00000002709RPA17370.938Tupaia_belangeri
ENSCVAG00000019431rpa19963.605ENSTTRG00000001169RPA19963.149Tursiops_truncatus
ENSCVAG00000019431rpa19863.043ENSUAMG00000015676RPA19571.154Ursus_americanus
ENSCVAG00000019431rpa19965.225ENSUMAG00000009328RPA19962.643Ursus_maritimus
ENSCVAG00000019431rpa19962.522ENSVPAG00000009443RPA19961.075Vicugna_pacos
ENSCVAG00000019431rpa19963.462ENSVVUG00000021715RPA19963.072Vulpes_vulpes
ENSCVAG00000019431rpa110067.496ENSXETG00000013538rpa19967.273Xenopus_tropicalis
ENSCVAG00000019431rpa19487.214ENSXCOG00000010068rpa19487.766Xiphophorus_couchianus
ENSCVAG00000019431rpa19962.274ENSXCOG00000009899-9960.727Xiphophorus_couchianus
ENSCVAG00000019431rpa19568.904ENSXMAG00000010333RPA18168.904Xiphophorus_maculatus
ENSCVAG00000019431rpa110088.468ENSXMAG00000004102rpa110088.850Xiphophorus_maculatus

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