EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000019511 (Gene tree)
Gene ID: 107104567
Gene Symbol: imp3
Alias: zgc:56526
Full Name: IMP3%2C U3 small nucleolar ribonucleoprotein
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 9813 bases
Position: chrKL654295.1:14354-24166
Accession: 107104567
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000030744	Ribosomal_S4	PF00163.19	1.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000031952	-	558	XM_015404586	ENSCVAP00000030744	185 (aa)	XP_015260072	-

Gene Model

Click here to download ENSCVAG00000019511's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000019511's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000019511	imp3	100	83.684	ENSAPOG00000014720	imp3	100	83.684	Acanthochromis_polyacanthus
ENSCVAG00000019511	imp3	100	62.827	ENSAMEG00000019247	IMP3	100	62.827	Ailuropoda_melanoleuca
ENSCVAG00000019511	imp3	98	80.645	ENSACIG00000022070	imp3	96	80.645	Amphilophus_citrinellus
ENSCVAG00000019511	imp3	100	83.684	ENSAOCG00000015761	imp3	100	83.684	Amphiprion_ocellaris
ENSCVAG00000019511	imp3	100	83.158	ENSAPEG00000005250	imp3	100	83.158	Amphiprion_percula
ENSCVAG00000019511	imp3	100	82.632	ENSATEG00000020021	imp3	100	82.632	Anabas_testudineus
ENSCVAG00000019511	imp3	99	60.938	ENSACAG00000016259	IMP3	99	60.938	Anolis_carolinensis
ENSCVAG00000019511	imp3	100	61.780	ENSANAG00000016669	-	100	61.780	Aotus_nancymaae
ENSCVAG00000019511	imp3	99	53.261	ENSANAG00000036874	-	99	53.261	Aotus_nancymaae
ENSCVAG00000019511	imp3	100	82.105	ENSACLG00000009929	imp3	100	82.105	Astatotilapia_calliptera
ENSCVAG00000019511	imp3	96	77.473	ENSAMXG00000018715	imp3	99	77.473	Astyanax_mexicanus
ENSCVAG00000019511	imp3	99	45.652	WBGene00016740	C48B6.2	99	45.652	Caenorhabditis_elegans
ENSCVAG00000019511	imp3	100	61.780	ENSCJAG00000044585	IMP3	100	61.780	Callithrix_jacchus
ENSCVAG00000019511	imp3	100	60.733	ENSCAFG00000018039	IMP3	82	60.733	Canis_familiaris
ENSCVAG00000019511	imp3	100	60.733	ENSCAFG00020003760	-	100	60.733	Canis_lupus_dingo
ENSCVAG00000019511	imp3	100	49.738	ENSCAFG00020006737	-	100	50.262	Canis_lupus_dingo
ENSCVAG00000019511	imp3	100	62.304	ENSCHIG00000006295	IMP3	100	62.304	Capra_hircus
ENSCVAG00000019511	imp3	100	61.780	ENSTSYG00000005503	IMP3	100	61.780	Carlito_syrichta
ENSCVAG00000019511	imp3	100	62.304	ENSCPOG00000012016	IMP3	100	62.304	Cavia_porcellus
ENSCVAG00000019511	imp3	98	54.011	ENSCCAG00000023378	-	99	52.486	Cebus_capucinus
ENSCVAG00000019511	imp3	100	61.780	ENSCCAG00000002712	-	100	61.780	Cebus_capucinus
ENSCVAG00000019511	imp3	100	61.780	ENSCATG00000015188	IMP3	100	61.780	Cercocebus_atys
ENSCVAG00000019511	imp3	100	61.780	ENSCSAG00000019732	IMP3	100	61.780	Chlorocebus_sabaeus
ENSCVAG00000019511	imp3	100	62.304	ENSCHOG00000012046	IMP3	100	62.304	Choloepus_hoffmanni
ENSCVAG00000019511	imp3	99	58.947	ENSCPBG00000021662	IMP3	99	58.947	Chrysemys_picta_bellii
ENSCVAG00000019511	imp3	99	60.656	ENSCING00000004233	-	100	60.656	Ciona_intestinalis
ENSCVAG00000019511	imp3	99	61.749	ENSCSAVG00000000698	-	100	61.749	Ciona_savignyi
ENSCVAG00000019511	imp3	100	61.780	ENSCANG00000018342	IMP3	100	61.780	Colobus_angolensis_palliatus
ENSCVAG00000019511	imp3	100	61.780	ENSCGRG00001001326	Imp3	100	61.780	Cricetulus_griseus_chok1gshd
ENSCVAG00000019511	imp3	100	61.780	ENSCGRG00000018907	Imp3	100	61.780	Cricetulus_griseus_crigri
ENSCVAG00000019511	imp3	99	82.011	ENSCSEG00000017200	imp3	99	82.011	Cynoglossus_semilaevis
ENSCVAG00000019511	imp3	100	78.947	ENSDARG00000115266	imp3	100	78.977	Danio_rerio
ENSCVAG00000019511	imp3	100	62.827	ENSDNOG00000015787	IMP3	81	62.827	Dasypus_novemcinctus
ENSCVAG00000019511	imp3	100	62.304	ENSDORG00000029301	Imp3	100	62.304	Dipodomys_ordii
ENSCVAG00000019511	imp3	99	58.470	FBgn0034232	CG4866	100	58.470	Drosophila_melanogaster
ENSCVAG00000019511	imp3	100	63.874	ENSETEG00000004278	IMP3	100	63.874	Echinops_telfairi
ENSCVAG00000019511	imp3	99	68.306	ENSEBUG00000002343	imp3	99	68.306	Eptatretus_burgeri
ENSCVAG00000019511	imp3	100	61.257	ENSEASG00005015693	IMP3	100	61.257	Equus_asinus_asinus
ENSCVAG00000019511	imp3	100	61.780	ENSECAG00000015786	IMP3	100	61.780	Equus_caballus
ENSCVAG00000019511	imp3	100	79.459	ENSELUG00000023264	imp3	100	79.459	Esox_lucius
ENSCVAG00000019511	imp3	100	61.780	ENSFCAG00000040328	IMP3	100	61.780	Felis_catus
ENSCVAG00000019511	imp3	71	48.551	ENSFALG00000014811	IMP3	99	50.725	Ficedula_albicollis
ENSCVAG00000019511	imp3	100	62.304	ENSFDAG00000018422	IMP3	100	62.304	Fukomys_damarensis
ENSCVAG00000019511	imp3	100	83.684	ENSFHEG00000016954	imp3	100	83.684	Fundulus_heteroclitus
ENSCVAG00000019511	imp3	100	80.541	ENSGMOG00000018162	imp3	100	80.541	Gadus_morhua
ENSCVAG00000019511	imp3	100	52.406	ENSGALG00000040238	IMP3	100	53.125	Gallus_gallus
ENSCVAG00000019511	imp3	100	83.158	ENSGAFG00000007425	imp3	100	83.158	Gambusia_affinis
ENSCVAG00000019511	imp3	100	82.703	ENSGACG00000015998	imp3	100	82.703	Gasterosteus_aculeatus
ENSCVAG00000019511	imp3	99	57.895	ENSGAGG00000008163	IMP3	99	57.895	Gopherus_agassizii
ENSCVAG00000019511	imp3	100	61.780	ENSGGOG00000025122	IMP3	100	61.780	Gorilla_gorilla
ENSCVAG00000019511	imp3	100	82.632	ENSHBUG00000018453	imp3	100	82.632	Haplochromis_burtoni
ENSCVAG00000019511	imp3	100	61.780	ENSHGLG00000019824	IMP3	100	61.780	Heterocephalus_glaber_female
ENSCVAG00000019511	imp3	100	61.780	ENSHGLG00100020660	IMP3	100	61.780	Heterocephalus_glaber_male
ENSCVAG00000019511	imp3	100	82.105	ENSHCOG00000020565	imp3	100	82.105	Hippocampus_comes
ENSCVAG00000019511	imp3	100	78.378	ENSIPUG00000013142	imp3	100	78.378	Ictalurus_punctatus
ENSCVAG00000019511	imp3	100	62.304	ENSSTOG00000030143	IMP3	100	62.304	Ictidomys_tridecemlineatus
ENSCVAG00000019511	imp3	100	81.579	ENSKMAG00000001956	imp3	100	81.579	Kryptolebias_marmoratus
ENSCVAG00000019511	imp3	100	79.474	ENSLBEG00000008178	imp3	100	79.474	Labrus_bergylta
ENSCVAG00000019511	imp3	100	75.135	ENSLACG00000022148	imp3	100	75.135	Latimeria_chalumnae
ENSCVAG00000019511	imp3	100	78.378	ENSLOCG00000010237	imp3	100	78.378	Lepisosteus_oculatus
ENSCVAG00000019511	imp3	99	61.905	ENSLAFG00000004425	IMP3	99	61.905	Loxodonta_africana
ENSCVAG00000019511	imp3	100	61.780	ENSMFAG00000008867	IMP3	100	61.780	Macaca_fascicularis
ENSCVAG00000019511	imp3	100	61.780	ENSMMUG00000016103	IMP3	100	61.780	Macaca_mulatta
ENSCVAG00000019511	imp3	100	61.780	ENSMNEG00000026328	IMP3	100	61.780	Macaca_nemestrina
ENSCVAG00000019511	imp3	100	83.684	ENSMAMG00000003215	imp3	100	83.684	Mastacembelus_armatus
ENSCVAG00000019511	imp3	100	82.105	ENSMZEG00005005544	imp3	100	82.105	Maylandia_zebra
ENSCVAG00000019511	imp3	100	61.257	ENSMAUG00000010279	Imp3	100	61.257	Mesocricetus_auratus
ENSCVAG00000019511	imp3	100	61.780	ENSMICG00000044149	IMP3	100	61.780	Microcebus_murinus
ENSCVAG00000019511	imp3	100	61.780	ENSMOCG00000008647	Imp3	100	61.780	Microtus_ochrogaster
ENSCVAG00000019511	imp3	96	82.967	ENSMMOG00000018117	imp3	84	82.967	Mola_mola
ENSCVAG00000019511	imp3	100	62.304	ENSMODG00000025193	IMP3	100	62.304	Monodelphis_domestica
ENSCVAG00000019511	imp3	100	82.105	ENSMALG00000006505	imp3	100	82.105	Monopterus_albus
ENSCVAG00000019511	imp3	100	61.780	MGP_CAROLIEiJ_G0032258	Imp3	100	61.780	Mus_caroli
ENSCVAG00000019511	imp3	100	61.780	ENSMUSG00000032288	Imp3	100	61.780	Mus_musculus
ENSCVAG00000019511	imp3	100	61.780	MGP_PahariEiJ_G0015125	Imp3	100	61.780	Mus_pahari
ENSCVAG00000019511	imp3	100	61.780	MGP_SPRETEiJ_G0033398	Imp3	100	61.780	Mus_spretus
ENSCVAG00000019511	imp3	100	61.257	ENSMPUG00000020147	IMP3	100	61.257	Mustela_putorius_furo
ENSCVAG00000019511	imp3	100	61.780	ENSMLUG00000014032	IMP3	100	61.780	Myotis_lucifugus
ENSCVAG00000019511	imp3	100	62.903	ENSNGAG00000017248	Imp3	100	62.903	Nannospalax_galili
ENSCVAG00000019511	imp3	100	82.105	ENSNBRG00000004060	imp3	100	82.105	Neolamprologus_brichardi
ENSCVAG00000019511	imp3	100	63.441	ENSOPRG00000015906	-	100	63.441	Ochotona_princeps
ENSCVAG00000019511	imp3	100	62.304	ENSODEG00000020194	IMP3	100	62.304	Octodon_degus
ENSCVAG00000019511	imp3	100	81.579	ENSONIG00000010661	imp3	100	81.579	Oreochromis_niloticus
ENSCVAG00000019511	imp3	100	61.780	ENSOCUG00000004690	IMP3	100	61.780	Oryctolagus_cuniculus
ENSCVAG00000019511	imp3	100	81.579	ENSORLG00000004484	imp3	100	81.579	Oryzias_latipes
ENSCVAG00000019511	imp3	100	81.579	ENSORLG00020003771	imp3	100	81.579	Oryzias_latipes_hni
ENSCVAG00000019511	imp3	100	81.053	ENSORLG00015006933	imp3	100	81.053	Oryzias_latipes_hsok
ENSCVAG00000019511	imp3	100	82.105	ENSOMEG00000016160	imp3	100	82.105	Oryzias_melastigma
ENSCVAG00000019511	imp3	100	62.827	ENSOGAG00000004917	IMP3	100	62.827	Otolemur_garnettii
ENSCVAG00000019511	imp3	100	61.780	ENSPPAG00000009241	IMP3	100	61.780	Pan_paniscus
ENSCVAG00000019511	imp3	100	61.780	ENSPPRG00000018701	IMP3	100	61.780	Panthera_pardus
ENSCVAG00000019511	imp3	100	61.780	ENSPTRG00000052235	IMP3	100	61.780	Pan_troglodytes
ENSCVAG00000019511	imp3	100	61.780	ENSPANG00000013668	IMP3	100	61.780	Papio_anubis
ENSCVAG00000019511	imp3	100	81.622	ENSPKIG00000007169	imp3	100	81.622	Paramormyrops_kingsleyae
ENSCVAG00000019511	imp3	100	72.539	ENSPMGG00000009379	imp3	100	72.539	Periophthalmus_magnuspinnatus
ENSCVAG00000019511	imp3	100	61.780	ENSPEMG00000013003	Imp3	100	61.780	Peromyscus_maniculatus_bairdii
ENSCVAG00000019511	imp3	100	83.684	ENSPFOG00000016529	imp3	100	83.684	Poecilia_formosa
ENSCVAG00000019511	imp3	100	84.211	ENSPLAG00000013831	imp3	100	84.211	Poecilia_latipinna
ENSCVAG00000019511	imp3	100	83.158	ENSPMEG00000000797	imp3	100	83.158	Poecilia_mexicana
ENSCVAG00000019511	imp3	100	83.684	ENSPREG00000006885	imp3	100	83.684	Poecilia_reticulata
ENSCVAG00000019511	imp3	100	62.304	ENSPPYG00000006664	IMP3	100	62.304	Pongo_abelii
ENSCVAG00000019511	imp3	99	62.434	ENSPCAG00000006920	IMP3	99	62.434	Procavia_capensis
ENSCVAG00000019511	imp3	100	61.780	ENSPCOG00000012367	IMP3	100	61.780	Propithecus_coquereli
ENSCVAG00000019511	imp3	100	62.304	ENSPVAG00000010036	IMP3	100	62.304	Pteropus_vampyrus
ENSCVAG00000019511	imp3	100	82.105	ENSPNYG00000000324	imp3	100	82.105	Pundamilia_nyererei
ENSCVAG00000019511	imp3	100	80.526	ENSPNAG00000017113	imp3	100	80.526	Pygocentrus_nattereri
ENSCVAG00000019511	imp3	100	61.780	ENSRNOG00000017460	Imp3	100	61.780	Rattus_norvegicus
ENSCVAG00000019511	imp3	100	62.304	ENSRBIG00000024522	IMP3	100	62.304	Rhinopithecus_bieti
ENSCVAG00000019511	imp3	100	62.304	ENSRROG00000024157	IMP3	100	62.304	Rhinopithecus_roxellana
ENSCVAG00000019511	imp3	99	49.735	YHR148W	-	99	49.735	Saccharomyces_cerevisiae
ENSCVAG00000019511	imp3	100	61.780	ENSSBOG00000006542	-	100	61.780	Saimiri_boliviensis_boliviensis
ENSCVAG00000019511	imp3	99	53.439	ENSSBOG00000026404	-	99	53.439	Saimiri_boliviensis_boliviensis
ENSCVAG00000019511	imp3	99	60.847	ENSSHAG00000006200	IMP3	99	60.847	Sarcophilus_harrisii
ENSCVAG00000019511	imp3	100	78.421	ENSSFOG00015012483	imp3	100	78.421	Scleropages_formosus
ENSCVAG00000019511	imp3	100	81.053	ENSSMAG00000007865	imp3	100	81.053	Scophthalmus_maximus
ENSCVAG00000019511	imp3	100	82.632	ENSSDUG00000010594	imp3	100	82.632	Seriola_dumerili
ENSCVAG00000019511	imp3	100	82.632	ENSSLDG00000015587	imp3	100	82.632	Seriola_lalandi_dorsalis
ENSCVAG00000019511	imp3	100	62.304	ENSSARG00000009657	IMP3	100	62.304	Sorex_araneus
ENSCVAG00000019511	imp3	100	83.158	ENSSPAG00000002088	imp3	100	83.158	Stegastes_partitus
ENSCVAG00000019511	imp3	100	51.562	ENSTGUG00000013228	IMP3	100	53.125	Taeniopygia_guttata
ENSCVAG00000019511	imp3	99	84.239	ENSTRUG00000025783	imp3	99	84.239	Takifugu_rubripes
ENSCVAG00000019511	imp3	100	62.304	ENSUAMG00000022724	IMP3	100	62.304	Ursus_americanus
ENSCVAG00000019511	imp3	100	62.304	ENSUMAG00000003736	IMP3	100	62.304	Ursus_maritimus
ENSCVAG00000019511	imp3	100	61.257	ENSVVUG00000019589	IMP3	100	61.257	Vulpes_vulpes
ENSCVAG00000019511	imp3	96	83.516	ENSXCOG00000007392	imp3	96	83.516	Xiphophorus_couchianus
ENSCVAG00000019511	imp3	100	84.737	ENSXMAG00000023049	imp3	100	84.737	Xiphophorus_maculatus