EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000019561 (Gene tree)
Gene ID: -
Gene Symbol: rad54l
Alias: zgc:56289
Full Name: RAD54 like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 9579 bases
Position: chrKL653820.1:142795-152373
Accession: 107102786
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000016520	ResIII	PF04851.15	8.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000031959	-	1245	-	ENSCVAP00000016555	414 (aa)	-	-
ENSCVAT00000024914	-	1695	XM_015402214	ENSCVAP00000016520	564 (aa)	XP_015257700	-

Gene Model

Click here to download ENSCVAG00000019561's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000019561's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000019561	rad54l	85	34.821	ENSCVAG00000008090	ercc6l	69	34.821
ENSCVAG00000019561	rad54l	63	37.594	ENSCVAG00000012049	-	58	37.594
ENSCVAG00000019561	rad54l	91	46.850	ENSCVAG00000009200	rad54b	60	46.850

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000019561	rad54l	99	81.423	ENSG00000085999	RAD54L	100	85.333	Homo_sapiens
ENSCVAG00000019561	rad54l	99	86.378	ENSAPOG00000011643	rad54l	77	86.378	Acanthochromis_polyacanthus
ENSCVAG00000019561	rad54l	100	79.528	ENSAMEG00000013902	RAD54L	87	79.528	Ailuropoda_melanoleuca
ENSCVAG00000019561	rad54l	100	87.097	ENSACIG00000001939	rad54l	77	87.097	Amphilophus_citrinellus
ENSCVAG00000019561	rad54l	99	90.283	ENSAOCG00000017576	rad54l	87	90.283	Amphiprion_ocellaris
ENSCVAG00000019561	rad54l	99	89.879	ENSAPEG00000020658	rad54l	89	89.879	Amphiprion_percula
ENSCVAG00000019561	rad54l	100	89.516	ENSATEG00000006767	rad54l	91	89.516	Anabas_testudineus
ENSCVAG00000019561	rad54l	99	84.000	ENSAPLG00000006389	RAD54L	92	84.000	Anas_platyrhynchos
ENSCVAG00000019561	rad54l	99	84.800	ENSACAG00000002312	RAD54L	77	84.800	Anolis_carolinensis
ENSCVAG00000019561	rad54l	99	80.632	ENSANAG00000035439	RAD54L	86	80.632	Aotus_nancymaae
ENSCVAG00000019561	rad54l	100	84.211	ENSACLG00000018711	rad54l	83	84.211	Astatotilapia_calliptera
ENSCVAG00000019561	rad54l	100	86.454	ENSAMXG00000012777	rad54l	77	88.211	Astyanax_mexicanus
ENSCVAG00000019561	rad54l	99	80.237	ENSBTAG00000019901	RAD54L	86	80.237	Bos_taurus
ENSCVAG00000019561	rad54l	99	65.432	WBGene00004298	rad-54	73	65.432	Caenorhabditis_elegans
ENSCVAG00000019561	rad54l	99	79.257	ENSCJAG00000021080	RAD54L	82	76.471	Callithrix_jacchus
ENSCVAG00000019561	rad54l	100	80.315	ENSCAFG00000004272	RAD54L	77	80.315	Canis_familiaris
ENSCVAG00000019561	rad54l	100	80.315	ENSCAFG00020015066	RAD54L	77	80.315	Canis_lupus_dingo
ENSCVAG00000019561	rad54l	99	80.237	ENSCHIG00000020118	RAD54L	86	80.237	Capra_hircus
ENSCVAG00000019561	rad54l	99	81.028	ENSTSYG00000002032	RAD54L	86	81.028	Carlito_syrichta
ENSCVAG00000019561	rad54l	99	81.028	ENSCPOG00000006768	RAD54L	86	81.028	Cavia_porcellus
ENSCVAG00000019561	rad54l	99	81.423	ENSCCAG00000025783	RAD54L	87	81.423	Cebus_capucinus
ENSCVAG00000019561	rad54l	99	81.423	ENSCATG00000030589	RAD54L	86	81.423	Cercocebus_atys
ENSCVAG00000019561	rad54l	99	82.609	ENSCLAG00000004645	RAD54L	86	82.609	Chinchilla_lanigera
ENSCVAG00000019561	rad54l	99	81.028	ENSCSAG00000001229	RAD54L	86	81.028	Chlorocebus_sabaeus
ENSCVAG00000019561	rad54l	99	83.200	ENSCPBG00000005675	RAD54L	77	83.200	Chrysemys_picta_bellii
ENSCVAG00000019561	rad54l	99	69.758	ENSCING00000024456	-	82	69.758	Ciona_intestinalis
ENSCVAG00000019561	rad54l	99	70.161	ENSCSAVG00000010859	-	75	70.161	Ciona_savignyi
ENSCVAG00000019561	rad54l	99	81.423	ENSCANG00000034891	RAD54L	86	81.423	Colobus_angolensis_palliatus
ENSCVAG00000019561	rad54l	99	80.632	ENSCGRG00001014807	Rad54l	87	80.632	Cricetulus_griseus_chok1gshd
ENSCVAG00000019561	rad54l	99	80.632	ENSCGRG00000016038	Rad54l	87	80.632	Cricetulus_griseus_crigri
ENSCVAG00000019561	rad54l	100	88.710	ENSCSEG00000001983	rad54l	79	88.710	Cynoglossus_semilaevis
ENSCVAG00000019561	rad54l	100	86.694	ENSDARG00000018623	rad54l	77	86.694	Danio_rerio
ENSCVAG00000019561	rad54l	99	79.876	ENSDNOG00000003395	RAD54L	87	79.447	Dasypus_novemcinctus
ENSCVAG00000019561	rad54l	96	82.213	ENSDORG00000002632	Rad54l	74	82.213	Dipodomys_ordii
ENSCVAG00000019561	rad54l	99	63.415	FBgn0002989	okr	72	63.415	Drosophila_melanogaster
ENSCVAG00000019561	rad54l	78	79.814	ENSETEG00000000550	RAD54L	60	79.814	Echinops_telfairi
ENSCVAG00000019561	rad54l	100	79.921	ENSEASG00005004511	RAD54L	92	79.921	Equus_asinus_asinus
ENSCVAG00000019561	rad54l	100	79.921	ENSECAG00000008760	RAD54L	92	79.921	Equus_caballus
ENSCVAG00000019561	rad54l	99	80.632	ENSEEUG00000008113	RAD54L	87	80.632	Erinaceus_europaeus
ENSCVAG00000019561	rad54l	100	87.649	ENSELUG00000002295	rad54l	77	87.649	Esox_lucius
ENSCVAG00000019561	rad54l	99	79.447	ENSFCAG00000003444	RAD54L	87	79.447	Felis_catus
ENSCVAG00000019561	rad54l	99	84.000	ENSFALG00000009480	RAD54L	87	84.000	Ficedula_albicollis
ENSCVAG00000019561	rad54l	99	81.423	ENSFDAG00000007806	RAD54L	87	81.423	Fukomys_damarensis
ENSCVAG00000019561	rad54l	90	60.769	ENSFHEG00000009824	rad54l	88	60.769	Fundulus_heteroclitus
ENSCVAG00000019561	rad54l	100	86.454	ENSGMOG00000014568	rad54l	78	86.454	Gadus_morhua
ENSCVAG00000019561	rad54l	99	84.800	ENSGALG00000010356	RAD54L	71	84.800	Gallus_gallus
ENSCVAG00000019561	rad54l	88	94.475	ENSGAFG00000011110	rad54l	75	94.475	Gambusia_affinis
ENSCVAG00000019561	rad54l	99	89.200	ENSGACG00000003111	rad54l	75	89.200	Gasterosteus_aculeatus
ENSCVAG00000019561	rad54l	99	82.000	ENSGAGG00000014089	RAD54L	74	82.000	Gopherus_agassizii
ENSCVAG00000019561	rad54l	99	81.028	ENSGGOG00000010602	RAD54L	86	81.028	Gorilla_gorilla
ENSCVAG00000019561	rad54l	100	84.520	ENSHBUG00000007793	rad54l	83	84.520	Haplochromis_burtoni
ENSCVAG00000019561	rad54l	99	80.237	ENSHGLG00000000753	RAD54L	86	80.237	Heterocephalus_glaber_female
ENSCVAG00000019561	rad54l	99	80.237	ENSHGLG00100016987	RAD54L	86	80.237	Heterocephalus_glaber_male
ENSCVAG00000019561	rad54l	100	86.378	ENSIPUG00000015999	rad54l	82	86.378	Ictalurus_punctatus
ENSCVAG00000019561	rad54l	100	80.315	ENSSTOG00000029125	RAD54L	87	80.315	Ictidomys_tridecemlineatus
ENSCVAG00000019561	rad54l	96	56.414	ENSJJAG00000000235	-	88	56.414	Jaculus_jaculus
ENSCVAG00000019561	rad54l	100	88.845	ENSKMAG00000009944	rad54l	87	88.845	Kryptolebias_marmoratus
ENSCVAG00000019561	rad54l	99	91.020	ENSLBEG00000014617	rad54l	92	91.020	Labrus_bergylta
ENSCVAG00000019561	rad54l	99	86.687	ENSLOCG00000004144	rad54l	75	90.608	Lepisosteus_oculatus
ENSCVAG00000019561	rad54l	99	79.447	ENSLAFG00000007583	RAD54L	87	80.632	Loxodonta_africana
ENSCVAG00000019561	rad54l	100	81.102	ENSMFAG00000031241	RAD54L	87	81.102	Macaca_fascicularis
ENSCVAG00000019561	rad54l	100	81.102	ENSMMUG00000011568	RAD54L	87	81.102	Macaca_mulatta
ENSCVAG00000019561	rad54l	100	80.709	ENSMNEG00000038562	RAD54L	87	80.709	Macaca_nemestrina
ENSCVAG00000019561	rad54l	99	81.423	ENSMLEG00000038145	RAD54L	86	81.423	Mandrillus_leucophaeus
ENSCVAG00000019561	rad54l	99	90.204	ENSMAMG00000022180	rad54l	94	90.204	Mastacembelus_armatus
ENSCVAG00000019561	rad54l	100	84.211	ENSMZEG00005018081	rad54l	83	84.211	Maylandia_zebra
ENSCVAG00000019561	rad54l	99	84.400	ENSMGAG00000010634	RAD54L	77	84.400	Meleagris_gallopavo
ENSCVAG00000019561	rad54l	99	80.632	ENSMAUG00000020076	Rad54l	87	80.632	Mesocricetus_auratus
ENSCVAG00000019561	rad54l	100	81.102	ENSMICG00000003266	RAD54L	87	81.102	Microcebus_murinus
ENSCVAG00000019561	rad54l	99	81.028	ENSMOCG00000001778	Rad54l	87	81.028	Microtus_ochrogaster
ENSCVAG00000019561	rad54l	99	89.600	ENSMALG00000021148	rad54l	80	89.600	Monopterus_albus
ENSCVAG00000019561	rad54l	96	81.423	MGP_CAROLIEiJ_G0026325	Rad54l	82	81.423	Mus_caroli
ENSCVAG00000019561	rad54l	99	81.028	ENSMUSG00000028702	Rad54l	87	81.028	Mus_musculus
ENSCVAG00000019561	rad54l	99	81.028	MGP_PahariEiJ_G0028657	Rad54l	87	81.028	Mus_pahari
ENSCVAG00000019561	rad54l	99	81.028	MGP_SPRETEiJ_G0027297	Rad54l	87	81.028	Mus_spretus
ENSCVAG00000019561	rad54l	99	80.237	ENSMPUG00000012883	RAD54L	87	80.237	Mustela_putorius_furo
ENSCVAG00000019561	rad54l	99	81.028	ENSMLUG00000003763	RAD54L	87	81.028	Myotis_lucifugus
ENSCVAG00000019561	rad54l	99	81.818	ENSNGAG00000024213	Rad54l	87	81.818	Nannospalax_galili
ENSCVAG00000019561	rad54l	99	82.213	ENSNLEG00000016548	RAD54L	86	82.213	Nomascus_leucogenys
ENSCVAG00000019561	rad54l	99	84.000	ENSMEUG00000006793	RAD54L	84	84.000	Notamacropus_eugenii
ENSCVAG00000019561	rad54l	99	81.423	ENSOPRG00000016016	RAD54L	77	81.423	Ochotona_princeps
ENSCVAG00000019561	rad54l	99	80.632	ENSODEG00000008519	RAD54L	86	80.632	Octodon_degus
ENSCVAG00000019561	rad54l	100	84.211	ENSONIG00000007659	rad54l	81	84.211	Oreochromis_niloticus
ENSCVAG00000019561	rad54l	99	82.213	ENSOCUG00000005229	RAD54L	87	82.213	Oryctolagus_cuniculus
ENSCVAG00000019561	rad54l	100	87.649	ENSORLG00000002958	rad54l	88	87.649	Oryzias_latipes
ENSCVAG00000019561	rad54l	99	87.952	ENSORLG00020006554	rad54l	94	87.952	Oryzias_latipes_hni
ENSCVAG00000019561	rad54l	100	87.649	ENSORLG00015002907	rad54l	88	87.649	Oryzias_latipes_hsok
ENSCVAG00000019561	rad54l	100	87.926	ENSOMEG00000007770	rad54l	88	86.853	Oryzias_melastigma
ENSCVAG00000019561	rad54l	99	80.237	ENSOARG00000002264	RAD54L	86	80.237	Ovis_aries
ENSCVAG00000019561	rad54l	99	81.423	ENSPPAG00000031222	RAD54L	86	81.423	Pan_paniscus
ENSCVAG00000019561	rad54l	99	79.447	ENSPPRG00000010317	RAD54L	87	79.447	Panthera_pardus
ENSCVAG00000019561	rad54l	99	79.447	ENSPTIG00000012200	RAD54L	87	79.447	Panthera_tigris_altaica
ENSCVAG00000019561	rad54l	99	81.818	ENSPTRG00000000689	RAD54L	86	81.818	Pan_troglodytes
ENSCVAG00000019561	rad54l	99	81.423	ENSPANG00000016295	RAD54L	82	86.957	Papio_anubis
ENSCVAG00000019561	rad54l	100	83.468	ENSPKIG00000016172	rad54l	78	83.468	Paramormyrops_kingsleyae
ENSCVAG00000019561	rad54l	99	82.800	ENSPSIG00000003258	RAD54L	78	82.800	Pelodiscus_sinensis
ENSCVAG00000019561	rad54l	99	85.887	ENSPMGG00000016335	rad54l	77	86.939	Periophthalmus_magnuspinnatus
ENSCVAG00000019561	rad54l	99	80.632	ENSPEMG00000011422	Rad54l	87	80.632	Peromyscus_maniculatus_bairdii
ENSCVAG00000019561	rad54l	99	66.751	ENSPMAG00000007719	rad54l	86	66.751	Petromyzon_marinus
ENSCVAG00000019561	rad54l	99	82.400	ENSPCIG00000029032	RAD54L	87	82.400	Phascolarctos_cinereus
ENSCVAG00000019561	rad54l	88	94.475	ENSPFOG00000013732	rad54l	90	94.475	Poecilia_formosa
ENSCVAG00000019561	rad54l	88	89.130	ENSPLAG00000023416	rad54l	82	89.130	Poecilia_latipinna
ENSCVAG00000019561	rad54l	88	94.475	ENSPMEG00000008299	rad54l	85	94.475	Poecilia_mexicana
ENSCVAG00000019561	rad54l	99	93.522	ENSPREG00000019955	rad54l	87	93.522	Poecilia_reticulata
ENSCVAG00000019561	rad54l	80	79.876	ENSPPYG00000001398	RAD54L	90	60.743	Pongo_abelii
ENSCVAG00000019561	rad54l	92	79.126	ENSPCAG00000005323	RAD54L	70	79.126	Procavia_capensis
ENSCVAG00000019561	rad54l	99	81.423	ENSPCOG00000015423	RAD54L	87	81.423	Propithecus_coquereli
ENSCVAG00000019561	rad54l	100	84.211	ENSPNYG00000002942	rad54l	83	84.211	Pundamilia_nyererei
ENSCVAG00000019561	rad54l	100	85.484	ENSPNAG00000012483	rad54l	77	85.484	Pygocentrus_nattereri
ENSCVAG00000019561	rad54l	99	80.632	ENSRNOG00000013148	Rad54l	86	80.632	Rattus_norvegicus
ENSCVAG00000019561	rad54l	99	81.423	ENSRBIG00000043495	RAD54L	86	81.423	Rhinopithecus_bieti
ENSCVAG00000019561	rad54l	99	81.423	ENSRROG00000020844	RAD54L	86	81.423	Rhinopithecus_roxellana
ENSCVAG00000019561	rad54l	87	55.102	YGL163C	RAD54	64	55.102	Saccharomyces_cerevisiae
ENSCVAG00000019561	rad54l	99	81.423	ENSSBOG00000024672	RAD54L	87	81.423	Saimiri_boliviensis_boliviensis
ENSCVAG00000019561	rad54l	99	83.200	ENSSHAG00000000110	RAD54L	87	83.200	Sarcophilus_harrisii
ENSCVAG00000019561	rad54l	100	88.446	ENSSDUG00000019147	rad54l	87	88.446	Seriola_dumerili
ENSCVAG00000019561	rad54l	100	87.649	ENSSLDG00000012330	rad54l	92	87.649	Seriola_lalandi_dorsalis
ENSCVAG00000019561	rad54l	79	87.692	ENSSARG00000006689	RAD54L	88	87.692	Sorex_araneus
ENSCVAG00000019561	rad54l	99	88.000	ENSSPAG00000011016	rad54l	87	88.000	Stegastes_partitus
ENSCVAG00000019561	rad54l	99	80.237	ENSSSCG00000003905	RAD54L	87	80.237	Sus_scrofa
ENSCVAG00000019561	rad54l	99	82.800	ENSTGUG00000008233	RAD54L	87	82.800	Taeniopygia_guttata
ENSCVAG00000019561	rad54l	99	87.200	ENSTRUG00000008410	rad54l	80	88.259	Takifugu_rubripes
ENSCVAG00000019561	rad54l	99	87.200	ENSTNIG00000004716	rad54l	78	87.200	Tetraodon_nigroviridis
ENSCVAG00000019561	rad54l	99	79.447	ENSTTRG00000006315	RAD54L	87	79.447	Tursiops_truncatus
ENSCVAG00000019561	rad54l	100	79.921	ENSUAMG00000011824	RAD54L	90	77.407	Ursus_americanus
ENSCVAG00000019561	rad54l	100	76.378	ENSUMAG00000023603	RAD54L	90	74.074	Ursus_maritimus
ENSCVAG00000019561	rad54l	100	80.315	ENSVVUG00000007201	RAD54L	77	80.315	Vulpes_vulpes
ENSCVAG00000019561	rad54l	93	84.211	ENSXETG00000004369	rad54l	74	84.211	Xenopus_tropicalis
ENSCVAG00000019561	rad54l	57	87.307	ENSXCOG00000016028	rad54l	71	87.307	Xiphophorus_couchianus