EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000019574 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 1877 bases
Position: chrKL653249.1:370034-371910
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000030781	zf-C2H2	PF00096.26	1.5e-16	1	3
ENSCVAP00000030781	zf-C2H2	PF00096.26	1.5e-16	2	3
ENSCVAP00000030781	zf-C2H2	PF00096.26	1.5e-16	3	3
ENSCVAP00000030781	zf-met	PF12874.7	2.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000025028	-	519	-	ENSCVAP00000030781	172 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000019574's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000019574's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000019574	-	91	39.655	ENSCVAG00000001369	-	87	39.655
ENSCVAG00000019574	-	75	37.879	ENSCVAG00000017168	gfi1b	60	37.879
ENSCVAG00000019574	-	86	36.129	ENSCVAG00000015159	-	57	36.129
ENSCVAG00000019574	-	94	38.400	ENSCVAG00000020414	-	58	38.400
ENSCVAG00000019574	-	85	40.580	ENSCVAG00000002500	-	83	40.580
ENSCVAG00000019574	-	81	39.080	ENSCVAG00000002506	-	95	39.080
ENSCVAG00000019574	-	85	41.379	ENSCVAG00000002295	-	71	37.607
ENSCVAG00000019574	-	83	40.517	ENSCVAG00000016181	-	87	40.517
ENSCVAG00000019574	-	84	37.500	ENSCVAG00000016883	-	52	37.500
ENSCVAG00000019574	-	80	34.400	ENSCVAG00000001609	-	73	34.400
ENSCVAG00000019574	-	87	40.496	ENSCVAG00000006389	-	92	40.171
ENSCVAG00000019574	-	81	43.860	ENSCVAG00000003250	-	61	43.860
ENSCVAG00000019574	-	78	44.211	ENSCVAG00000020745	-	78	44.211
ENSCVAG00000019574	-	78	38.793	ENSCVAG00000016915	-	51	38.793
ENSCVAG00000019574	-	77	45.455	ENSCVAG00000006491	-	63	45.455
ENSCVAG00000019574	-	80	38.462	ENSCVAG00000014734	-	86	38.462
ENSCVAG00000019574	-	76	43.529	ENSCVAG00000003497	-	83	40.000
ENSCVAG00000019574	-	83	39.316	ENSCVAG00000002305	-	74	39.316
ENSCVAG00000019574	-	80	36.029	ENSCVAG00000002307	-	67	36.029
ENSCVAG00000019574	-	77	36.782	ENSCVAG00000004508	-	57	36.782
ENSCVAG00000019574	-	85	36.620	ENSCVAG00000009827	-	84	36.620
ENSCVAG00000019574	-	85	39.175	ENSCVAG00000003514	-	85	39.175
ENSCVAG00000019574	-	85	38.776	ENSCVAG00000003512	-	84	38.776
ENSCVAG00000019574	-	67	40.698	ENSCVAG00000015616	-	77	40.698
ENSCVAG00000019574	-	83	43.103	ENSCVAG00000021152	-	61	43.103
ENSCVAG00000019574	-	96	38.462	ENSCVAG00000020126	-	81	38.462
ENSCVAG00000019574	-	92	36.800	ENSCVAG00000005507	-	90	36.800
ENSCVAG00000019574	-	70	40.517	ENSCVAG00000003630	-	61	40.517
ENSCVAG00000019574	-	88	38.028	ENSCVAG00000012248	-	88	38.028
ENSCVAG00000019574	-	83	35.897	ENSCVAG00000021225	-	76	37.607
ENSCVAG00000019574	-	92	37.313	ENSCVAG00000018383	-	76	37.313
ENSCVAG00000019574	-	81	36.752	ENSCVAG00000003433	-	99	36.752
ENSCVAG00000019574	-	76	37.864	ENSCVAG00000003434	-	71	37.864
ENSCVAG00000019574	-	94	40.441	ENSCVAG00000013337	-	99	40.441
ENSCVAG00000019574	-	88	37.069	ENSCVAG00000017511	-	90	36.752
ENSCVAG00000019574	-	78	40.351	ENSCVAG00000019767	-	56	40.351
ENSCVAG00000019574	-	84	40.909	ENSCVAG00000012216	-	80	40.909
ENSCVAG00000019574	-	78	40.179	ENSCVAG00000012399	-	89	40.179
ENSCVAG00000019574	-	83	35.294	ENSCVAG00000003396	-	70	35.294
ENSCVAG00000019574	-	74	40.171	ENSCVAG00000011469	-	74	40.171
ENSCVAG00000019574	-	77	41.489	ENSCVAG00000020155	-	80	41.489
ENSCVAG00000019574	-	76	38.053	ENSCVAG00000019097	-	64	38.053
ENSCVAG00000019574	-	78	45.238	ENSCVAG00000009103	-	86	37.984
ENSCVAG00000019574	-	83	45.349	ENSCVAG00000014269	-	96	45.349
ENSCVAG00000019574	-	82	37.607	ENSCVAG00000008535	-	68	37.607
ENSCVAG00000019574	-	87	37.226	ENSCVAG00000012343	-	90	37.226
ENSCVAG00000019574	-	78	42.478	ENSCVAG00000000144	-	66	42.478
ENSCVAG00000019574	-	88	41.379	ENSCVAG00000022991	-	97	41.379
ENSCVAG00000019574	-	80	41.667	ENSCVAG00000011334	-	81	41.667
ENSCVAG00000019574	-	84	40.141	ENSCVAG00000001568	-	73	40.141
ENSCVAG00000019574	-	95	40.000	ENSCVAG00000012180	-	97	38.710
ENSCVAG00000019574	-	83	42.188	ENSCVAG00000005494	-	88	42.188
ENSCVAG00000019574	-	71	39.655	ENSCVAG00000019705	-	61	39.655
ENSCVAG00000019574	-	67	37.288	ENSCVAG00000018485	-	95	37.288
ENSCVAG00000019574	-	80	41.667	ENSCVAG00000003428	-	96	41.667
ENSCVAG00000019574	-	83	39.316	ENSCVAG00000009981	-	81	39.316
ENSCVAG00000019574	-	72	40.698	ENSCVAG00000008836	-	61	36.752
ENSCVAG00000019574	-	78	37.607	ENSCVAG00000002833	-	64	37.607
ENSCVAG00000019574	-	78	50.633	ENSCVAG00000016796	-	84	50.633
ENSCVAG00000019574	-	78	33.913	ENSCVAG00000000351	-	60	33.913
ENSCVAG00000019574	-	80	35.484	ENSCVAG00000009747	-	52	35.484
ENSCVAG00000019574	-	72	36.937	ENSCVAG00000004382	-	82	36.937
ENSCVAG00000019574	-	84	39.683	ENSCVAG00000002242	-	90	39.683
ENSCVAG00000019574	-	81	44.681	ENSCVAG00000014622	-	66	44.681
ENSCVAG00000019574	-	97	43.529	ENSCVAG00000006653	-	64	43.529
ENSCVAG00000019574	-	81	43.662	ENSCVAG00000012543	-	93	39.316
ENSCVAG00000019574	-	89	36.207	ENSCVAG00000000419	-	69	36.207
ENSCVAG00000019574	-	72	33.333	ENSCVAG00000003417	-	62	33.333
ENSCVAG00000019574	-	76	46.237	ENSCVAG00000004368	-	72	46.237
ENSCVAG00000019574	-	94	37.500	ENSCVAG00000023054	-	64	37.500
ENSCVAG00000019574	-	78	42.424	ENSCVAG00000019764	-	62	42.424
ENSCVAG00000019574	-	77	39.316	ENSCVAG00000013692	prdm5	57	39.316
ENSCVAG00000019574	-	85	47.059	ENSCVAG00000002488	-	71	47.059
ENSCVAG00000019574	-	69	40.449	ENSCVAG00000009561	scrt1b	53	40.449
ENSCVAG00000019574	-	89	38.710	ENSCVAG00000011235	-	85	40.171
ENSCVAG00000019574	-	71	33.333	ENSCVAG00000019122	-	97	33.333
ENSCVAG00000019574	-	80	38.679	ENSCVAG00000009752	-	60	38.679
ENSCVAG00000019574	-	77	41.228	ENSCVAG00000004958	-	73	41.509
ENSCVAG00000019574	-	89	38.655	ENSCVAG00000016092	-	51	38.655
ENSCVAG00000019574	-	84	39.706	ENSCVAG00000019646	-	66	39.706
ENSCVAG00000019574	-	91	43.478	ENSCVAG00000021107	-	93	43.478
ENSCVAG00000019574	-	70	42.500	ENSCVAG00000017005	sall3b	57	42.500
ENSCVAG00000019574	-	85	51.613	ENSCVAG00000013382	-	61	51.613
ENSCVAG00000019574	-	78	41.880	ENSCVAG00000016964	-	84	41.880
ENSCVAG00000019574	-	71	39.316	ENSCVAG00000018507	-	72	39.316
ENSCVAG00000019574	-	88	38.462	ENSCVAG00000008206	-	92	38.462
ENSCVAG00000019574	-	78	40.541	ENSCVAG00000008200	-	90	40.171
ENSCVAG00000019574	-	80	40.870	ENSCVAG00000007073	-	51	40.870
ENSCVAG00000019574	-	84	37.209	ENSCVAG00000002284	-	71	37.209
ENSCVAG00000019574	-	87	46.835	ENSCVAG00000010442	-	96	42.735
ENSCVAG00000019574	-	83	43.820	ENSCVAG00000010160	-	74	43.820
ENSCVAG00000019574	-	87	37.903	ENSCVAG00000017890	-	90	37.903
ENSCVAG00000019574	-	78	38.655	ENSCVAG00000001767	-	79	38.655
ENSCVAG00000019574	-	71	40.244	ENSCVAG00000008952	-	90	40.244
ENSCVAG00000019574	-	90	40.517	ENSCVAG00000005112	-	67	40.517
ENSCVAG00000019574	-	80	36.000	ENSCVAG00000007169	-	53	36.000
ENSCVAG00000019574	-	80	40.171	ENSCVAG00000014404	-	91	40.171
ENSCVAG00000019574	-	84	45.588	ENSCVAG00000000227	-	71	45.588

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000019574	-	81	38.202	ENSACIG00000017166	-	66	38.202	Amphilophus_citrinellus
ENSCVAG00000019574	-	70	39.655	ENSAOCG00000018579	-	69	39.655	Amphiprion_ocellaris
ENSCVAG00000019574	-	70	30.894	WBGene00021374	Y37E11B.1	84	31.624	Caenorhabditis_elegans
ENSCVAG00000019574	-	88	31.092	ENSCING00000005713	-	69	31.092	Ciona_intestinalis
ENSCVAG00000019574	-	79	30.380	ENSCSAVG00000006729	-	63	30.380	Ciona_savignyi
ENSCVAG00000019574	-	87	35.043	ENSCSAVG00000009574	-	99	35.043	Ciona_savignyi
ENSCVAG00000019574	-	95	31.132	FBgn0030012	CG18262	50	31.132	Drosophila_melanogaster
ENSCVAG00000019574	-	95	35.897	ENSEBUG00000008392	-	79	35.897	Eptatretus_burgeri
ENSCVAG00000019574	-	94	37.600	ENSEBUG00000004841	-	82	37.600	Eptatretus_burgeri
ENSCVAG00000019574	-	89	36.752	ENSEBUG00000015522	-	72	36.752	Eptatretus_burgeri
ENSCVAG00000019574	-	95	36.842	ENSEBUG00000000735	-	95	36.842	Eptatretus_burgeri
ENSCVAG00000019574	-	76	39.831	ENSFHEG00000020889	-	70	39.831	Fundulus_heteroclitus
ENSCVAG00000019574	-	85	42.373	ENSFHEG00000012990	-	91	42.373	Fundulus_heteroclitus
ENSCVAG00000019574	-	83	44.444	ENSFHEG00000013644	-	77	41.026	Fundulus_heteroclitus
ENSCVAG00000019574	-	74	34.586	ENSGACG00000018415	-	98	34.586	Gasterosteus_aculeatus
ENSCVAG00000019574	-	83	45.455	ENSHCOG00000017437	-	51	37.607	Hippocampus_comes
ENSCVAG00000019574	-	78	43.662	ENSHCOG00000014881	-	58	43.662	Hippocampus_comes
ENSCVAG00000019574	-	89	41.176	ENSKMAG00000007658	-	82	41.176	Kryptolebias_marmoratus
ENSCVAG00000019574	-	53	35.789	ENSMMOG00000001961	-	84	35.789	Mola_mola
ENSCVAG00000019574	-	81	39.080	ENSONIG00000003471	-	91	36.752	Oreochromis_niloticus
ENSCVAG00000019574	-	99	36.090	ENSONIG00000016416	-	95	36.090	Oreochromis_niloticus
ENSCVAG00000019574	-	75	31.356	ENSONIG00000009894	-	59	31.356	Oreochromis_niloticus
ENSCVAG00000019574	-	94	41.748	ENSONIG00000007812	-	96	41.748	Oreochromis_niloticus
ENSCVAG00000019574	-	81	36.220	ENSONIG00000003224	-	95	36.220	Oreochromis_niloticus
ENSCVAG00000019574	-	83	43.056	ENSORLG00015018254	-	89	43.056	Oryzias_latipes_hsok
ENSCVAG00000019574	-	76	35.484	ENSOMEG00000017673	-	70	35.484	Oryzias_melastigma
ENSCVAG00000019574	-	78	50.000	ENSPMGG00000000243	-	67	41.379	Periophthalmus_magnuspinnatus
ENSCVAG00000019574	-	83	37.255	ENSPMGG00000010563	-	59	37.255	Periophthalmus_magnuspinnatus
ENSCVAG00000019574	-	87	41.880	ENSPMGG00000022524	-	93	41.880	Periophthalmus_magnuspinnatus
ENSCVAG00000019574	-	84	47.143	ENSPMGG00000000458	-	90	38.235	Periophthalmus_magnuspinnatus
ENSCVAG00000019574	-	77	44.828	ENSPMGG00000010664	-	89	44.828	Periophthalmus_magnuspinnatus
ENSCVAG00000019574	-	78	37.008	ENSPMAG00000007983	-	70	37.008	Petromyzon_marinus
ENSCVAG00000019574	-	78	36.207	ENSPFOG00000020691	-	80	36.207	Poecilia_formosa
ENSCVAG00000019574	-	97	41.739	ENSPFOG00000002879	-	99	41.739	Poecilia_formosa
ENSCVAG00000019574	-	88	37.500	ENSPLAG00000006174	-	71	39.837	Poecilia_latipinna
ENSCVAG00000019574	-	78	38.400	ENSPMEG00000022676	-	95	38.400	Poecilia_mexicana
ENSCVAG00000019574	-	81	78.571	ENSPREG00000015352	-	63	78.571	Poecilia_reticulata
ENSCVAG00000019574	-	87	44.444	ENSPREG00000016204	-	65	36.559	Poecilia_reticulata
ENSCVAG00000019574	-	87	45.714	ENSSDUG00000000946	-	90	36.567	Seriola_dumerili
ENSCVAG00000019574	-	82	36.066	ENSSLDG00000000464	-	67	36.066	Seriola_lalandi_dorsalis
ENSCVAG00000019574	-	77	39.773	ENSSLDG00000002515	-	64	39.773	Seriola_lalandi_dorsalis
ENSCVAG00000019574	-	72	37.069	ENSTNIG00000008154	-	53	37.069	Tetraodon_nigroviridis
ENSCVAG00000019574	-	81	79.856	ENSXMAG00000022242	-	59	79.856	Xiphophorus_maculatus