EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000019592 (Gene tree)
Gene ID: 107102787
Gene Symbol: -
Alias: -
Full Name: histone RNA hairpin-binding protein-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 14027 bases
Position: chrKL653820.1:76825-90851
Accession: 107102787
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000030797	SLBP_RNA_bind	PF15247.6	7.5e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000025053	-	1312	XM_015402215	ENSCVAP00000030797	266 (aa)	XP_015257701	UPI0007427723

Gene Model

Click here to download ENSCVAG00000019592's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000019592's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000019592	-	94	48.649	ENSG00000163950	SLBP	89	49.624	Homo_sapiens
ENSCVAG00000019592	-	94	70.189	ENSAPOG00000004953	slbp	93	70.189	Acanthochromis_polyacanthus
ENSCVAG00000019592	-	55	61.688	ENSAMEG00000016915	SLBP	74	61.988	Ailuropoda_melanoleuca
ENSCVAG00000019592	-	94	70.472	ENSACIG00000022308	slbp	97	70.472	Amphilophus_citrinellus
ENSCVAG00000019592	-	92	70.428	ENSAOCG00000024545	slbp	90	70.428	Amphiprion_ocellaris
ENSCVAG00000019592	-	92	70.428	ENSAPEG00000017629	slbp	90	70.428	Amphiprion_percula
ENSCVAG00000019592	-	92	72.093	ENSATEG00000016358	slbp	90	72.481	Anabas_testudineus
ENSCVAG00000019592	-	75	50.495	ENSAPLG00000015989	-	87	53.960	Anas_platyrhynchos
ENSCVAG00000019592	-	94	47.328	ENSANAG00000034769	SLBP	84	54.419	Aotus_nancymaae
ENSCVAG00000019592	-	94	69.057	ENSACLG00000007036	-	94	68.441	Astatotilapia_calliptera
ENSCVAG00000019592	-	94	55.344	ENSAMXG00000014527	slbp	93	56.274	Astyanax_mexicanus
ENSCVAG00000019592	-	84	51.982	ENSBTAG00000001328	SLBP	79	53.617	Bos_taurus
ENSCVAG00000019592	-	94	48.092	ENSCJAG00000001790	SLBP	87	49.442	Callithrix_jacchus
ENSCVAG00000019592	-	76	57.488	ENSCAFG00000015016	SLBP	71	58.173	Canis_familiaris
ENSCVAG00000019592	-	76	57.488	ENSCAFG00020012334	SLBP	71	58.173	Canis_lupus_dingo
ENSCVAG00000019592	-	84	51.982	ENSCHIG00000019364	SLBP	79	53.617	Capra_hircus
ENSCVAG00000019592	-	81	50.000	ENSTSYG00000000376	SLBP	82	53.081	Carlito_syrichta
ENSCVAG00000019592	-	59	59.236	ENSCPOG00000000031	SLBP	63	58.289	Cavia_porcellus
ENSCVAG00000019592	-	94	48.649	ENSCATG00000029173	SLBP	87	50.763	Cercocebus_atys
ENSCVAG00000019592	-	62	60.714	ENSCLAG00000008157	SLBP	83	52.245	Chinchilla_lanigera
ENSCVAG00000019592	-	67	45.000	ENSCSAG00000015628	SLBP	61	47.826	Chlorocebus_sabaeus
ENSCVAG00000019592	-	76	58.454	ENSCPBG00000000746	SLBP	79	55.895	Chrysemys_picta_bellii
ENSCVAG00000019592	-	75	52.736	ENSCANG00000041008	SLBP	87	54.634	Colobus_angolensis_palliatus
ENSCVAG00000019592	-	76	55.610	ENSCGRG00001009760	-	83	49.200	Cricetulus_griseus_chok1gshd
ENSCVAG00000019592	-	81	52.995	ENSCGRG00001012991	-	89	47.328	Cricetulus_griseus_chok1gshd
ENSCVAG00000019592	-	76	55.610	ENSCGRG00000004506	Slbp	83	49.200	Cricetulus_griseus_crigri
ENSCVAG00000019592	-	94	67.843	ENSCSEG00000020337	-	92	67.843	Cynoglossus_semilaevis
ENSCVAG00000019592	-	94	57.088	ENSDARG00000100558	slbp	84	57.088	Danio_rerio
ENSCVAG00000019592	-	76	54.286	ENSDNOG00000047539	SLBP	73	54.206	Dasypus_novemcinctus
ENSCVAG00000019592	-	62	56.627	ENSDORG00000003028	Slbp	93	60.588	Dipodomys_ordii
ENSCVAG00000019592	-	83	52.252	ENSETEG00000004641	SLBP	89	54.626	Echinops_telfairi
ENSCVAG00000019592	-	52	61.871	ENSEASG00005022714	SLBP	88	52.717	Equus_asinus_asinus
ENSCVAG00000019592	-	74	54.680	ENSECAG00000011689	SLBP	64	57.005	Equus_caballus
ENSCVAG00000019592	-	91	58.730	ENSELUG00000012854	slbp	83	61.111	Esox_lucius
ENSCVAG00000019592	-	76	56.585	ENSFCAG00000000169	SLBP	68	59.884	Felis_catus
ENSCVAG00000019592	-	97	47.727	ENSFALG00000010003	-	90	47.727	Ficedula_albicollis
ENSCVAG00000019592	-	77	52.174	ENSFDAG00000007592	SLBP	89	51.406	Fukomys_damarensis
ENSCVAG00000019592	-	94	80.000	ENSFHEG00000007497	slbp	100	76.471	Fundulus_heteroclitus
ENSCVAG00000019592	-	58	72.611	ENSGMOG00000015352	slbp	100	71.875	Gadus_morhua
ENSCVAG00000019592	-	97	50.382	ENSGALG00000015712	SLBP	90	50.575	Gallus_gallus
ENSCVAG00000019592	-	100	78.467	ENSGAFG00000019577	slbp	100	78.102	Gambusia_affinis
ENSCVAG00000019592	-	93	63.889	ENSGACG00000019596	slbp	93	63.492	Gasterosteus_aculeatus
ENSCVAG00000019592	-	76	56.459	ENSGAGG00000012096	SLBP	81	57.488	Gopherus_agassizii
ENSCVAG00000019592	-	94	48.649	ENSGGOG00000003167	SLBP	89	49.624	Gorilla_gorilla
ENSCVAG00000019592	-	94	69.434	ENSHBUG00000003338	-	94	68.821	Haplochromis_burtoni
ENSCVAG00000019592	-	61	54.819	ENSHGLG00000010461	-	62	52.874	Heterocephalus_glaber_female
ENSCVAG00000019592	-	61	55.280	ENSHGLG00000008313	-	72	47.847	Heterocephalus_glaber_female
ENSCVAG00000019592	-	61	56.522	ENSHGLG00100010510	-	72	48.804	Heterocephalus_glaber_male
ENSCVAG00000019592	-	61	54.819	ENSHGLG00100014906	-	62	52.874	Heterocephalus_glaber_male
ENSCVAG00000019592	-	69	56.522	ENSHGLG00100014018	-	88	60.847	Heterocephalus_glaber_male
ENSCVAG00000019592	-	98	65.428	ENSHCOG00000013425	slbp	97	64.312	Hippocampus_comes
ENSCVAG00000019592	-	80	58.525	ENSIPUG00000016780	slbp	82	57.399	Ictalurus_punctatus
ENSCVAG00000019592	-	77	53.589	ENSSTOG00000003262	SLBP	72	55.399	Ictidomys_tridecemlineatus
ENSCVAG00000019592	-	86	51.055	ENSJJAG00000002394	-	91	49.259	Jaculus_jaculus
ENSCVAG00000019592	-	86	47.699	ENSJJAG00000020549	-	83	49.200	Jaculus_jaculus
ENSCVAG00000019592	-	100	69.565	ENSKMAG00000008187	slbp	99	69.565	Kryptolebias_marmoratus
ENSCVAG00000019592	-	92	71.429	ENSLBEG00000024709	slbp	91	70.635	Labrus_bergylta
ENSCVAG00000019592	-	94	49.071	ENSLACG00000014623	SLBP	87	51.600	Latimeria_chalumnae
ENSCVAG00000019592	-	98	54.610	ENSLOCG00000011027	slbp	92	54.610	Lepisosteus_oculatus
ENSCVAG00000019592	-	75	55.721	ENSLAFG00000012933	SLBP	83	55.924	Loxodonta_africana
ENSCVAG00000019592	-	89	50.209	ENSMFAG00000030130	SLBP	71	53.039	Macaca_fascicularis
ENSCVAG00000019592	-	89	48.988	ENSMMUG00000032303	SLBP	83	55.340	Macaca_mulatta
ENSCVAG00000019592	-	59	45.294	ENSMNEG00000008082	SLBP	70	48.555	Macaca_nemestrina
ENSCVAG00000019592	-	87	48.498	ENSMLEG00000024639	SLBP	79	54.206	Mandrillus_leucophaeus
ENSCVAG00000019592	-	92	69.020	ENSMAMG00000001046	-	90	69.020	Mastacembelus_armatus
ENSCVAG00000019592	-	94	69.434	ENSMZEG00005017261	-	94	68.821	Maylandia_zebra
ENSCVAG00000019592	-	75	53.202	ENSMGAG00000013085	SLBP	87	53.202	Meleagris_gallopavo
ENSCVAG00000019592	-	81	54.545	ENSMAUG00000009490	Slbp	76	54.260	Mesocricetus_auratus
ENSCVAG00000019592	-	63	58.333	ENSMICG00000014244	SLBP	88	48.507	Microcebus_murinus
ENSCVAG00000019592	-	81	54.545	ENSMOCG00000015826	Slbp	90	57.143	Microtus_ochrogaster
ENSCVAG00000019592	-	92	63.265	ENSMMOG00000010181	slbp	92	63.265	Mola_mola
ENSCVAG00000019592	-	76	53.623	ENSMODG00000004304	SLBP	77	55.924	Monodelphis_domestica
ENSCVAG00000019592	-	97	69.742	ENSMALG00000013883	-	70	69.742	Monopterus_albus
ENSCVAG00000019592	-	76	55.610	MGP_CAROLIEiJ_G0027117	Slbp	90	53.425	Mus_caroli
ENSCVAG00000019592	-	76	55.610	ENSMUSG00000004642	Slbp	81	58.511	Mus_musculus
ENSCVAG00000019592	-	76	55.610	MGP_PahariEiJ_G0016901	Slbp	81	58.511	Mus_pahari
ENSCVAG00000019592	-	76	55.610	MGP_SPRETEiJ_G0028113	Slbp	81	58.511	Mus_spretus
ENSCVAG00000019592	-	63	58.480	ENSMLUG00000004425	SLBP	69	58.480	Myotis_lucifugus
ENSCVAG00000019592	-	81	54.751	ENSNGAG00000020799	Slbp	78	53.247	Nannospalax_galili
ENSCVAG00000019592	-	100	64.130	ENSNBRG00000006044	-	100	63.504	Neolamprologus_brichardi
ENSCVAG00000019592	-	94	47.368	ENSNLEG00000000048	SLBP	89	48.352	Nomascus_leucogenys
ENSCVAG00000019592	-	55	63.699	ENSMEUG00000002501	SLBP	89	61.176	Notamacropus_eugenii
ENSCVAG00000019592	-	62	61.905	ENSODEG00000012641	SLBP	85	51.220	Octodon_degus
ENSCVAG00000019592	-	94	67.681	ENSONIG00000017469	-	94	67.681	Oreochromis_niloticus
ENSCVAG00000019592	-	62	65.060	ENSOANG00000014243	SLBP	69	65.060	Ornithorhynchus_anatinus
ENSCVAG00000019592	-	95	68.627	ENSORLG00000024887	-	93	68.872	Oryzias_latipes
ENSCVAG00000019592	-	95	68.504	ENSORLG00020007798	slbp	92	67.717	Oryzias_latipes_hni
ENSCVAG00000019592	-	95	68.235	ENSORLG00015016656	slbp	92	67.451	Oryzias_latipes_hsok
ENSCVAG00000019592	-	91	68.033	ENSOMEG00000010818	slbp	99	63.603	Oryzias_melastigma
ENSCVAG00000019592	-	95	47.529	ENSOGAG00000009750	SLBP	90	49.624	Otolemur_garnettii
ENSCVAG00000019592	-	62	58.084	ENSOARG00000016090	SLBP	74	60.819	Ovis_aries
ENSCVAG00000019592	-	94	49.804	ENSPPAG00000033300	SLBP	87	51.737	Pan_paniscus
ENSCVAG00000019592	-	64	60.234	ENSPPRG00000016897	SLBP	77	56.311	Panthera_pardus
ENSCVAG00000019592	-	52	61.871	ENSPTIG00000015057	SLBP	70	61.268	Panthera_tigris_altaica
ENSCVAG00000019592	-	94	49.804	ENSPTRG00000015832	SLBP	87	51.737	Pan_troglodytes
ENSCVAG00000019592	-	89	48.178	ENSPANG00000004932	SLBP	80	55.072	Papio_anubis
ENSCVAG00000019592	-	92	57.752	ENSPKIG00000006183	slbp	93	56.522	Paramormyrops_kingsleyae
ENSCVAG00000019592	-	88	59.574	ENSPMGG00000017684	-	99	64.179	Periophthalmus_magnuspinnatus
ENSCVAG00000019592	-	76	55.610	ENSPEMG00000018369	Slbp	71	55.288	Peromyscus_maniculatus_bairdii
ENSCVAG00000019592	-	76	51.613	ENSPCIG00000013575	SLBP	70	49.049	Phascolarctos_cinereus
ENSCVAG00000019592	-	100	79.197	ENSPFOG00000000462	slbp	100	78.832	Poecilia_formosa
ENSCVAG00000019592	-	100	78.832	ENSPLAG00000008300	slbp	100	78.467	Poecilia_latipinna
ENSCVAG00000019592	-	100	79.197	ENSPMEG00000020807	slbp	100	78.832	Poecilia_mexicana
ENSCVAG00000019592	-	100	78.832	ENSPREG00000004561	slbp	100	78.467	Poecilia_reticulata
ENSCVAG00000019592	-	94	49.035	ENSPPYG00000014529	SLBP	88	49.811	Pongo_abelii
ENSCVAG00000019592	-	78	51.196	ENSPCOG00000017399	SLBP	82	53.555	Propithecus_coquereli
ENSCVAG00000019592	-	81	51.598	ENSPVAG00000002807	SLBP	88	49.618	Pteropus_vampyrus
ENSCVAG00000019592	-	94	69.434	ENSPNYG00000005451	-	94	68.821	Pundamilia_nyererei
ENSCVAG00000019592	-	94	54.864	ENSPNAG00000018503	slbp	93	54.864	Pygocentrus_nattereri
ENSCVAG00000019592	-	81	54.545	ENSRNOG00000037162	Slbp	88	48.679	Rattus_norvegicus
ENSCVAG00000019592	-	94	48.649	ENSRBIG00000039159	SLBP	87	50.763	Rhinopithecus_bieti
ENSCVAG00000019592	-	89	50.417	ENSRROG00000030081	SLBP	84	51.210	Rhinopithecus_roxellana
ENSCVAG00000019592	-	66	53.933	ENSSBOG00000033897	SLBP	87	53.591	Saimiri_boliviensis_boliviensis
ENSCVAG00000019592	-	76	52.074	ENSSHAG00000013939	SLBP	80	50.193	Sarcophilus_harrisii
ENSCVAG00000019592	-	97	56.391	ENSSFOG00015019429	slbp	95	56.391	Scleropages_formosus
ENSCVAG00000019592	-	92	70.155	ENSSMAG00000016028	-	92	69.202	Scophthalmus_maximus
ENSCVAG00000019592	-	94	72.481	ENSSDUG00000000855	-	93	72.481	Seriola_dumerili
ENSCVAG00000019592	-	90	51.852	ENSSLDG00000007554	-	72	53.712	Seriola_lalandi_dorsalis
ENSCVAG00000019592	-	54	72.789	ENSSLDG00000022893	-	87	72.789	Seriola_lalandi_dorsalis
ENSCVAG00000019592	-	91	47.737	ENSSPUG00000016007	SLBP	87	50.202	Sphenodon_punctatus
ENSCVAG00000019592	-	94	70.656	ENSSPAG00000004021	slbp	89	73.160	Stegastes_partitus
ENSCVAG00000019592	-	89	47.059	ENSSSCG00000008676	SLBP	84	51.613	Sus_scrofa
ENSCVAG00000019592	-	89	49.791	ENSTGUG00000010626	-	89	50.206	Taeniopygia_guttata
ENSCVAG00000019592	-	98	65.926	ENSTRUG00000000688	slbp	97	65.926	Takifugu_rubripes
ENSCVAG00000019592	-	92	63.492	ENSTNIG00000000484	-	98	63.492	Tetraodon_nigroviridis
ENSCVAG00000019592	-	55	60.417	ENSTBEG00000004085	SLBP	52	60.417	Tupaia_belangeri
ENSCVAG00000019592	-	55	65.986	ENSTTRG00000010901	-	74	60.588	Tursiops_truncatus
ENSCVAG00000019592	-	55	61.224	ENSTTRG00000004010	-	89	56.471	Tursiops_truncatus
ENSCVAG00000019592	-	75	55.024	ENSUAMG00000012990	SLBP	70	56.250	Ursus_americanus
ENSCVAG00000019592	-	76	57.971	ENSVVUG00000015578	-	71	58.654	Vulpes_vulpes
ENSCVAG00000019592	-	94	52.529	ENSXETG00000003876	slbp	88	52.823	Xenopus_tropicalis
ENSCVAG00000019592	-	92	79.200	ENSXCOG00000008275	slbp	95	77.470	Xiphophorus_couchianus
ENSCVAG00000019592	-	100	79.197	ENSXMAG00000001331	-	99	78.832	Xiphophorus_maculatus