EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000019619 (Gene tree)
Gene ID: 107097543
Gene Symbol: eif5b
Alias: im:6912504|si:ch211-254d18.3
Full Name: eukaryotic translation initiation factor 5B
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 43731 bases
Position: chrKL653205.1:186127-229857
Accession: 107097543
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000030786	IF-2	PF11987.8	4.8e-18	1	1
ENSCVAP00000030788	IF-2	PF11987.8	4.9e-18	1	1
ENSCVAP00000030786	GTP_EFTU	PF00009.27	4.6e-34	1	1
ENSCVAP00000030788	GTP_EFTU	PF00009.27	4.7e-34	1	1
ENSCVAP00000030788	MMR_HSR1	PF01926.23	1.2e-07	1	1
ENSCVAP00000030786	MMR_HSR1	PF01926.23	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000025029	-	4830	XM_015394716	ENSCVAP00000030786	1196 (aa)	XP_015250202	UPI0007426948
ENSCVAT00000025043	-	4854	XM_015394714	ENSCVAP00000030788	1204 (aa)	XP_015250200	UPI000742B9C5

Gene Model

Click here to download ENSCVAG00000019619's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000019619's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000019619	eif5b	100	80.820	ENSAPOG00000004375	eif5b	100	82.305	Acanthochromis_polyacanthus
ENSCVAG00000019619	eif5b	82	88.047	ENSACIG00000024324	eif5b	89	87.864	Amphilophus_citrinellus
ENSCVAG00000019619	eif5b	100	82.208	ENSAOCG00000018386	eif5b	100	81.908	Amphiprion_ocellaris
ENSCVAG00000019619	eif5b	100	83.101	ENSATEG00000006765	eif5b	98	81.460	Anabas_testudineus
ENSCVAG00000019619	eif5b	54	92.000	ENSATEG00000011451	-	77	80.559	Anabas_testudineus
ENSCVAG00000019619	eif5b	74	84.512	ENSATEG00000011259	eif5b	87	82.575	Anabas_testudineus
ENSCVAG00000019619	eif5b	100	68.725	ENSACAG00000008305	-	52	87.781	Anolis_carolinensis
ENSCVAG00000019619	eif5b	74	84.442	ENSACLG00000005530	eif5b	88	82.262	Astatotilapia_calliptera
ENSCVAG00000019619	eif5b	52	57.235	WBGene00021857	iffb-1	58	57.235	Caenorhabditis_elegans
ENSCVAG00000019619	eif5b	97	63.303	ENSCJAG00000009960	-	71	72.675	Callithrix_jacchus
ENSCVAG00000019619	eif5b	99	63.366	ENSCAPG00000014619	-	51	81.833	Cavia_aperea
ENSCVAG00000019619	eif5b	100	67.425	ENSCPOG00000011967	-	73	76.700	Cavia_porcellus
ENSCVAG00000019619	eif5b	57	65.160	ENSCHOG00000002137	-	58	79.724	Choloepus_hoffmanni
ENSCVAG00000019619	eif5b	51	62.987	ENSCSAVG00000008808	-	84	62.987	Ciona_savignyi
ENSCVAG00000019619	eif5b	52	93.098	ENSCSEG00000014153	eif5b	100	76.675	Cynoglossus_semilaevis
ENSCVAG00000019619	eif5b	100	73.137	ENSDARG00000016548	eif5b	70	83.911	Danio_rerio
ENSCVAG00000019619	eif5b	51	70.799	FBgn0026259	eIF5B	54	70.799	Drosophila_melanogaster
ENSCVAG00000019619	eif5b	52	90.953	ENSELUG00000001132	eif5b	76	90.953	Esox_lucius
ENSCVAG00000019619	eif5b	74	76.319	ENSGMOG00000002031	eif5b	73	76.345	Gadus_morhua
ENSCVAG00000019619	eif5b	79	95.299	ENSGAFG00000000088	eif5b	82	95.299	Gambusia_affinis
ENSCVAG00000019619	eif5b	85	82.415	ENSGACG00000010536	eif5b	89	91.628	Gasterosteus_aculeatus
ENSCVAG00000019619	eif5b	52	87.621	ENSGAGG00000022242	-	92	87.621	Gopherus_agassizii
ENSCVAG00000019619	eif5b	74	89.640	ENSHBUG00000023319	eif5b	74	89.147	Haplochromis_burtoni
ENSCVAG00000019619	eif5b	100	78.051	ENSHCOG00000002807	eif5b	100	77.087	Hippocampus_comes
ENSCVAG00000019619	eif5b	100	73.262	ENSIPUG00000020910	eif5b	76	82.274	Ictalurus_punctatus
ENSCVAG00000019619	eif5b	100	84.280	ENSKMAG00000004325	eif5b	100	82.895	Kryptolebias_marmoratus
ENSCVAG00000019619	eif5b	89	78.981	ENSLBEG00000027090	eif5b	96	78.802	Labrus_bergylta
ENSCVAG00000019619	eif5b	99	66.987	ENSLACG00000011688	eif5b	52	86.465	Latimeria_chalumnae
ENSCVAG00000019619	eif5b	100	82.329	ENSMAMG00000022568	eif5b	73	88.629	Mastacembelus_armatus
ENSCVAG00000019619	eif5b	74	89.640	ENSMZEG00005012696	eif5b	74	89.147	Maylandia_zebra
ENSCVAG00000019619	eif5b	89	67.489	ENSMODG00000001387	-	52	87.138	Monodelphis_domestica
ENSCVAG00000019619	eif5b	100	82.677	ENSMALG00000005862	eif5b	74	87.039	Monopterus_albus
ENSCVAG00000019619	eif5b	93	85.586	ENSNBRG00000021912	eif5b	85	85.506	Neolamprologus_brichardi
ENSCVAG00000019619	eif5b	100	82.881	ENSONIG00000018749	eif5b	73	89.101	Oreochromis_niloticus
ENSCVAG00000019619	eif5b	99	62.050	ENSOANG00000004621	-	53	87.460	Ornithorhynchus_anatinus
ENSCVAG00000019619	eif5b	100	81.555	ENSORLG00000001525	eif5b	100	80.066	Oryzias_latipes
ENSCVAG00000019619	eif5b	100	82.202	ENSORLG00020005327	eif5b	100	80.215	Oryzias_latipes_hni
ENSCVAG00000019619	eif5b	100	82.119	ENSORLG00015008949	eif5b	100	80.132	Oryzias_latipes_hsok
ENSCVAG00000019619	eif5b	67	88.375	ENSOMEG00000016539	eif5b	99	88.500	Oryzias_melastigma
ENSCVAG00000019619	eif5b	100	70.669	ENSPKIG00000011133	eif5b	73	82.594	Paramormyrops_kingsleyae
ENSCVAG00000019619	eif5b	58	77.904	ENSPSIG00000014914	-	94	76.695	Pelodiscus_sinensis
ENSCVAG00000019619	eif5b	75	65.867	ENSPMAG00000004508	eif5b	52	75.723	Petromyzon_marinus
ENSCVAG00000019619	eif5b	62	91.678	ENSPFOG00000007543	eif5b	100	92.081	Poecilia_formosa
ENSCVAG00000019619	eif5b	100	88.201	ENSPLAG00000015913	eif5b	100	86.127	Poecilia_latipinna
ENSCVAG00000019619	eif5b	100	88.303	ENSPMEG00000006712	eif5b	100	85.820	Poecilia_mexicana
ENSCVAG00000019619	eif5b	66	71.788	ENSPCAG00000007829	-	65	71.788	Procavia_capensis
ENSCVAG00000019619	eif5b	99	63.785	ENSPCOG00000019508	-	99	86.452	Propithecus_coquereli
ENSCVAG00000019619	eif5b	93	86.067	ENSPNYG00000021051	eif5b	89	84.083	Pundamilia_nyererei
ENSCVAG00000019619	eif5b	74	84.228	ENSPNAG00000023852	eif5b	73	84.487	Pygocentrus_nattereri
ENSCVAG00000019619	eif5b	100	73.952	ENSSFOG00015000594	eif5b	73	82.705	Scleropages_formosus
ENSCVAG00000019619	eif5b	82	77.653	ENSSMAG00000000045	eif5b	81	82.941	Scophthalmus_maximus
ENSCVAG00000019619	eif5b	71	87.559	ENSSDUG00000005847	eif5b	80	88.307	Seriola_dumerili
ENSCVAG00000019619	eif5b	71	87.324	ENSSLDG00000013738	eif5b	92	88.307	Seriola_lalandi_dorsalis
ENSCVAG00000019619	eif5b	79	89.720	ENSSPAG00000005335	eif5b	63	89.596	Stegastes_partitus
ENSCVAG00000019619	eif5b	69	81.432	ENSTRUG00000007772	eif5b	81	81.272	Takifugu_rubripes
ENSCVAG00000019619	eif5b	76	77.540	ENSTNIG00000006580	eif5b	95	80.440	Tetraodon_nigroviridis
ENSCVAG00000019619	eif5b	100	63.217	ENSXETG00000019377	eif5b	53	86.656	Xenopus_tropicalis
ENSCVAG00000019619	eif5b	74	87.177	ENSXCOG00000016681	eif5b	94	87.205	Xiphophorus_couchianus
ENSCVAG00000019619	eif5b	74	87.373	ENSXMAG00000001002	eif5b	94	87.402	Xiphophorus_maculatus