EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000019626 (Gene tree)
Gene ID: 107083454
Gene Symbol: tbrg1
Alias: zgc:171428
Full Name: transforming growth factor beta regulator 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 9155 bases
Position: chrKL652575.1:762657-771811
Accession: 107083454
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000016651	HARE-HTH	PF05066.13	1.2e-15	1	1
ENSCVAP00000030814	HARE-HTH	PF05066.13	3.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000031990	-	1966	XM_015372698	ENSCVAP00000030814	522 (aa)	XP_015228184	UPI0007428C66
ENSCVAT00000025090	-	2029	XM_015372697	ENSCVAP00000016651	543 (aa)	XP_015228183	UPI000742670A

Gene Model

Click here to download ENSCVAG00000019626's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000019626's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000019626	tbrg1	100	82.784	ENSAPOG00000017352	tbrg1	100	82.784	Acanthochromis_polyacanthus
ENSCVAG00000019626	tbrg1	93	80.709	ENSACIG00000021274	tbrg1	94	80.709	Amphilophus_citrinellus
ENSCVAG00000019626	tbrg1	100	82.601	ENSAOCG00000018605	tbrg1	100	82.601	Amphiprion_ocellaris
ENSCVAG00000019626	tbrg1	100	82.601	ENSAPEG00000022443	tbrg1	100	82.601	Amphiprion_percula
ENSCVAG00000019626	tbrg1	100	82.696	ENSATEG00000023537	tbrg1	100	82.514	Anabas_testudineus
ENSCVAG00000019626	tbrg1	100	81.967	ENSACLG00000000281	tbrg1	100	81.967	Astatotilapia_calliptera
ENSCVAG00000019626	tbrg1	99	68.266	ENSAMXG00000008381	tbrg1	96	63.781	Astyanax_mexicanus
ENSCVAG00000019626	tbrg1	100	79.927	ENSCSEG00000002445	tbrg1	100	79.927	Cynoglossus_semilaevis
ENSCVAG00000019626	tbrg1	98	66.045	ENSDARG00000074996	tbrg1	98	67.472	Danio_rerio
ENSCVAG00000019626	tbrg1	91	49.307	ENSEBUG00000014060	tbrg1	89	48.852	Eptatretus_burgeri
ENSCVAG00000019626	tbrg1	99	74.047	ENSELUG00000017458	tbrg1	99	72.595	Esox_lucius
ENSCVAG00000019626	tbrg1	88	87.603	ENSFHEG00000004283	tbrg1	93	87.603	Fundulus_heteroclitus
ENSCVAG00000019626	tbrg1	100	90.842	ENSGAFG00000000204	tbrg1	100	90.842	Gambusia_affinis
ENSCVAG00000019626	tbrg1	100	81.967	ENSHBUG00000004935	tbrg1	100	81.967	Haplochromis_burtoni
ENSCVAG00000019626	tbrg1	100	72.645	ENSHCOG00000010588	tbrg1	100	72.645	Hippocampus_comes
ENSCVAG00000019626	tbrg1	93	69.903	ENSIPUG00000008697	tbrg1	93	71.183	Ictalurus_punctatus
ENSCVAG00000019626	tbrg1	100	81.603	ENSKMAG00000002775	tbrg1	100	80.874	Kryptolebias_marmoratus
ENSCVAG00000019626	tbrg1	99	81.434	ENSLBEG00000017559	tbrg1	94	82.515	Labrus_bergylta
ENSCVAG00000019626	tbrg1	100	68.972	ENSLOCG00000003093	tbrg1	99	69.120	Lepisosteus_oculatus
ENSCVAG00000019626	tbrg1	100	81.967	ENSMAMG00000000876	tbrg1	100	81.967	Mastacembelus_armatus
ENSCVAG00000019626	tbrg1	100	81.967	ENSMZEG00005013545	tbrg1	92	81.967	Maylandia_zebra
ENSCVAG00000019626	tbrg1	98	77.528	ENSMMOG00000005314	tbrg1	93	77.388	Mola_mola
ENSCVAG00000019626	tbrg1	94	83.107	ENSMALG00000011630	tbrg1	99	81.942	Monopterus_albus
ENSCVAG00000019626	tbrg1	98	81.192	ENSNBRG00000017490	tbrg1	100	81.192	Neolamprologus_brichardi
ENSCVAG00000019626	tbrg1	100	82.332	ENSONIG00000005284	tbrg1	100	82.332	Oreochromis_niloticus
ENSCVAG00000019626	tbrg1	100	79.091	ENSORLG00000014519	tbrg1	100	78.364	Oryzias_latipes
ENSCVAG00000019626	tbrg1	100	78.182	ENSORLG00020009567	tbrg1	100	77.455	Oryzias_latipes_hni
ENSCVAG00000019626	tbrg1	100	79.091	ENSORLG00015000448	tbrg1	100	78.364	Oryzias_latipes_hsok
ENSCVAG00000019626	tbrg1	100	79.091	ENSOMEG00000006130	tbrg1	100	77.858	Oryzias_melastigma
ENSCVAG00000019626	tbrg1	95	69.663	ENSPKIG00000012274	tbrg1	89	69.943	Paramormyrops_kingsleyae
ENSCVAG00000019626	tbrg1	100	75.045	ENSPMGG00000015968	tbrg1	100	73.524	Periophthalmus_magnuspinnatus
ENSCVAG00000019626	tbrg1	100	89.927	ENSPFOG00000004279	tbrg1	100	91.026	Poecilia_formosa
ENSCVAG00000019626	tbrg1	100	89.927	ENSPLAG00000001227	tbrg1	100	91.026	Poecilia_latipinna
ENSCVAG00000019626	tbrg1	100	89.744	ENSPMEG00000000955	tbrg1	100	90.842	Poecilia_mexicana
ENSCVAG00000019626	tbrg1	100	89.377	ENSPREG00000005246	tbrg1	100	90.476	Poecilia_reticulata
ENSCVAG00000019626	tbrg1	87	80.873	ENSPNYG00000012625	tbrg1	100	80.873	Pundamilia_nyererei
ENSCVAG00000019626	tbrg1	98	68.275	ENSPNAG00000028332	tbrg1	96	68.750	Pygocentrus_nattereri
ENSCVAG00000019626	tbrg1	93	72.201	ENSSFOG00015009308	tbrg1	86	72.211	Scleropages_formosus
ENSCVAG00000019626	tbrg1	100	79.670	ENSSMAG00000002529	tbrg1	100	78.571	Scophthalmus_maximus
ENSCVAG00000019626	tbrg1	99	84.278	ENSSDUG00000013674	tbrg1	99	84.278	Seriola_dumerili
ENSCVAG00000019626	tbrg1	94	83.915	ENSSLDG00000008932	tbrg1	98	82.364	Seriola_lalandi_dorsalis
ENSCVAG00000019626	tbrg1	86	82.906	ENSSPAG00000004808	tbrg1	99	80.556	Stegastes_partitus
ENSCVAG00000019626	tbrg1	95	77.351	ENSTRUG00000005960	tbrg1	98	77.543	Takifugu_rubripes
ENSCVAG00000019626	tbrg1	100	90.659	ENSXMAG00000001551	tbrg1	100	90.659	Xiphophorus_maculatus