EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000019629 (Gene tree)
Gene ID: 107099811
Gene Symbol: -
Alias: -
Full Name: zinc finger C3H1-type containing
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 34724 bases
Position: chrKL653410.1:109472-144195
Accession: 107099811
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000016649	zf-C3H1	PF10650.9	1.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000025088	-	7035	XM_015398078	ENSCVAP00000016649	2061 (aa)	XP_015253564	UPI0007428AA5

Gene Model

Click here to download ENSCVAG00000019629's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000019629's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000019629	-	99	48.826	ENSG00000133858	ZFC3H1	99	48.794	Homo_sapiens
ENSCVAG00000019629	-	93	48.897	ENSAMEG00000000498	ZFC3H1	88	48.734	Ailuropoda_melanoleuca
ENSCVAG00000019629	-	80	75.000	ENSACIG00000015672	ZFC3H1	96	64.152	Amphilophus_citrinellus
ENSCVAG00000019629	-	99	67.035	ENSAOCG00000022567	ZFC3H1	99	66.266	Amphiprion_ocellaris
ENSCVAG00000019629	-	99	67.748	ENSATEG00000015391	ZFC3H1	99	67.796	Anabas_testudineus
ENSCVAG00000019629	-	89	49.690	ENSAPLG00000016116	ZFC3H1	99	49.598	Anas_platyrhynchos
ENSCVAG00000019629	-	97	49.781	ENSACAG00000007327	ZFC3H1	98	45.126	Anolis_carolinensis
ENSCVAG00000019629	-	97	48.459	ENSANAG00000038329	ZFC3H1	79	48.511	Aotus_nancymaae
ENSCVAG00000019629	-	99	67.219	ENSACLG00000021274	ZFC3H1	99	67.359	Astatotilapia_calliptera
ENSCVAG00000019629	-	99	48.130	ENSAMXG00000042831	-	97	49.419	Astyanax_mexicanus
ENSCVAG00000019629	-	99	49.226	ENSBTAG00000012267	ZFC3H1	93	48.609	Bos_taurus
ENSCVAG00000019629	-	98	48.767	ENSCJAG00000001384	ZFC3H1	79	48.759	Callithrix_jacchus
ENSCVAG00000019629	-	93	49.200	ENSCAFG00000000453	ZFC3H1	88	48.670	Canis_familiaris
ENSCVAG00000019629	-	93	49.200	ENSCAFG00020016502	ZFC3H1	88	48.670	Canis_lupus_dingo
ENSCVAG00000019629	-	99	49.102	ENSCHIG00000020097	ZFC3H1	93	48.485	Capra_hircus
ENSCVAG00000019629	-	91	48.637	ENSTSYG00000005471	ZFC3H1	93	48.639	Carlito_syrichta
ENSCVAG00000019629	-	99	46.178	ENSCPOG00000009504	ZFC3H1	99	45.939	Cavia_porcellus
ENSCVAG00000019629	-	98	48.464	ENSCCAG00000035967	ZFC3H1	79	48.697	Cebus_capucinus
ENSCVAG00000019629	-	99	48.764	ENSCATG00000016321	ZFC3H1	99	48.732	Cercocebus_atys
ENSCVAG00000019629	-	98	48.859	ENSCLAG00000007646	ZFC3H1	99	48.487	Chinchilla_lanigera
ENSCVAG00000019629	-	99	48.863	ENSCSAG00000004100	ZFC3H1	99	43.031	Chlorocebus_sabaeus
ENSCVAG00000019629	-	99	45.613	ENSCPBG00000013449	ZFC3H1	88	46.355	Chrysemys_picta_bellii
ENSCVAG00000019629	-	99	48.481	ENSCANG00000030229	ZFC3H1	99	48.485	Colobus_angolensis_palliatus
ENSCVAG00000019629	-	95	46.537	ENSCGRG00001011660	Zfc3h1	92	46.373	Cricetulus_griseus_chok1gshd
ENSCVAG00000019629	-	91	48.417	ENSCGRG00000006894	Zfc3h1	95	49.032	Cricetulus_griseus_crigri
ENSCVAG00000019629	-	83	51.684	ENSCSEG00000021462	ZFC3H1	99	50.581	Cynoglossus_semilaevis
ENSCVAG00000019629	-	93	43.691	ENSDNOG00000010314	ZFC3H1	93	44.000	Dasypus_novemcinctus
ENSCVAG00000019629	-	73	35.573	ENSEBUG00000003491	-	50	41.351	Eptatretus_burgeri
ENSCVAG00000019629	-	97	49.351	ENSECAG00000026833	ZFC3H1	99	49.074	Equus_caballus
ENSCVAG00000019629	-	99	54.885	ENSELUG00000013421	-	78	58.607	Esox_lucius
ENSCVAG00000019629	-	93	49.202	ENSFCAG00000024198	ZFC3H1	88	48.856	Felis_catus
ENSCVAG00000019629	-	87	50.719	ENSFALG00000010320	ZFC3H1	98	49.444	Ficedula_albicollis
ENSCVAG00000019629	-	93	48.556	ENSFDAG00000017503	ZFC3H1	99	48.176	Fukomys_damarensis
ENSCVAG00000019629	-	91	64.392	ENSGMOG00000004527	-	95	64.392	Gadus_morhua
ENSCVAG00000019629	-	99	49.385	ENSGALG00000010177	ZFC3H1	93	45.993	Gallus_gallus
ENSCVAG00000019629	-	66	84.967	ENSGAFG00000013283	-	100	85.040	Gambusia_affinis
ENSCVAG00000019629	-	99	63.016	ENSGACG00000007651	ZFC3H1	99	62.686	Gasterosteus_aculeatus
ENSCVAG00000019629	-	99	45.540	ENSGAGG00000013798	ZFC3H1	93	45.862	Gopherus_agassizii
ENSCVAG00000019629	-	99	48.702	ENSGGOG00000025994	ZFC3H1	99	48.670	Gorilla_gorilla
ENSCVAG00000019629	-	93	48.187	ENSHGLG00000014297	ZFC3H1	99	47.805	Heterocephalus_glaber_female
ENSCVAG00000019629	-	93	48.187	ENSHGLG00100006263	ZFC3H1	99	47.743	Heterocephalus_glaber_male
ENSCVAG00000019629	-	56	60.000	ENSHCOG00000009144	-	81	73.786	Hippocampus_comes
ENSCVAG00000019629	-	93	48.863	ENSSTOG00000002650	ZFC3H1	95	49.534	Ictidomys_tridecemlineatus
ENSCVAG00000019629	-	97	75.086	ENSKMAG00000021476	-	99	75.420	Kryptolebias_marmoratus
ENSCVAG00000019629	-	79	62.483	ENSLBEG00000012352	-	92	62.210	Labrus_bergylta
ENSCVAG00000019629	-	91	50.341	ENSLACG00000002585	ZFC3H1	89	51.508	Latimeria_chalumnae
ENSCVAG00000019629	-	92	67.480	ENSLOCG00000016238	ZFC3H1	91	65.854	Lepisosteus_oculatus
ENSCVAG00000019629	-	79	56.452	ENSLAFG00000005820	ZFC3H1	96	49.964	Loxodonta_africana
ENSCVAG00000019629	-	99	48.826	ENSMFAG00000039403	ZFC3H1	99	48.794	Macaca_fascicularis
ENSCVAG00000019629	-	99	48.826	ENSMMUG00000020943	ZFC3H1	99	48.794	Macaca_mulatta
ENSCVAG00000019629	-	99	48.826	ENSMNEG00000008807	ZFC3H1	99	48.794	Macaca_nemestrina
ENSCVAG00000019629	-	99	48.826	ENSMLEG00000029967	ZFC3H1	99	48.794	Mandrillus_leucophaeus
ENSCVAG00000019629	-	99	68.806	ENSMAMG00000021320	ZFC3H1	97	68.351	Mastacembelus_armatus
ENSCVAG00000019629	-	91	48.987	ENSMGAG00000010716	ZFC3H1	99	46.443	Meleagris_gallopavo
ENSCVAG00000019629	-	99	48.952	ENSMICG00000009137	ZFC3H1	99	48.427	Microcebus_murinus
ENSCVAG00000019629	-	93	49.382	ENSMODG00000020408	ZFC3H1	84	50.680	Monodelphis_domestica
ENSCVAG00000019629	-	92	48.801	MGP_CAROLIEiJ_G0015814	Zfc3h1	83	49.391	Mus_caroli
ENSCVAG00000019629	-	75	47.498	MGP_PahariEiJ_G0031273	Zfc3h1	83	48.100	Mus_pahari
ENSCVAG00000019629	-	94	48.758	MGP_SPRETEiJ_G0016636	Zfc3h1	93	48.199	Mus_spretus
ENSCVAG00000019629	-	93	48.990	ENSMPUG00000017488	ZFC3H1	93	48.765	Mustela_putorius_furo
ENSCVAG00000019629	-	94	44.034	ENSMLUG00000011723	ZFC3H1	89	48.962	Myotis_lucifugus
ENSCVAG00000019629	-	95	48.310	ENSNGAG00000017623	Zfc3h1	90	48.111	Nannospalax_galili
ENSCVAG00000019629	-	99	48.393	ENSNLEG00000004372	ZFC3H1	99	48.547	Nomascus_leucogenys
ENSCVAG00000019629	-	73	48.208	ENSOPRG00000008075	ZFC3H1	66	47.887	Ochotona_princeps
ENSCVAG00000019629	-	51	70.436	ENSONIG00000018271	ZFC3H1	99	70.000	Oreochromis_niloticus
ENSCVAG00000019629	-	93	48.348	ENSOCUG00000004591	ZFC3H1	99	49.041	Oryctolagus_cuniculus
ENSCVAG00000019629	-	99	65.312	ENSORLG00000000155	-	99	65.310	Oryzias_latipes
ENSCVAG00000019629	-	99	65.406	ENSORLG00015020699	-	99	65.121	Oryzias_latipes_hsok
ENSCVAG00000019629	-	99	65.408	ENSOMEG00000015403	-	99	65.734	Oryzias_melastigma
ENSCVAG00000019629	-	97	48.794	ENSOGAG00000033606	ZFC3H1	99	48.089	Otolemur_garnettii
ENSCVAG00000019629	-	99	49.288	ENSOARG00000014589	ZFC3H1	99	48.609	Ovis_aries
ENSCVAG00000019629	-	99	48.764	ENSPPAG00000029409	ZFC3H1	99	48.732	Pan_paniscus
ENSCVAG00000019629	-	93	49.202	ENSPPRG00000010196	ZFC3H1	88	48.856	Panthera_pardus
ENSCVAG00000019629	-	93	49.202	ENSPTIG00000006898	ZFC3H1	88	48.856	Panthera_tigris_altaica
ENSCVAG00000019629	-	99	48.764	ENSPTRG00000005224	ZFC3H1	99	48.732	Pan_troglodytes
ENSCVAG00000019629	-	99	47.874	ENSPANG00000009558	ZFC3H1	99	47.842	Papio_anubis
ENSCVAG00000019629	-	98	55.791	ENSPKIG00000023219	ZFC3H1	99	55.044	Paramormyrops_kingsleyae
ENSCVAG00000019629	-	98	50.186	ENSPSIG00000012997	ZFC3H1	98	48.152	Pelodiscus_sinensis
ENSCVAG00000019629	-	91	57.942	ENSPMGG00000007504	ZFC3H1	98	57.351	Periophthalmus_magnuspinnatus
ENSCVAG00000019629	-	93	49.287	ENSPCIG00000025066	ZFC3H1	77	50.788	Phascolarctos_cinereus
ENSCVAG00000019629	-	100	83.040	ENSPFOG00000001903	-	100	83.087	Poecilia_formosa
ENSCVAG00000019629	-	86	82.592	ENSPLAG00000015995	-	99	82.730	Poecilia_latipinna
ENSCVAG00000019629	-	91	76.923	ENSPMEG00000007517	-	96	76.489	Poecilia_mexicana
ENSCVAG00000019629	-	100	83.509	ENSPREG00000016974	ZFC3H1	100	83.269	Poecilia_reticulata
ENSCVAG00000019629	-	99	48.888	ENSPPYG00000004773	ZFC3H1	99	48.856	Pongo_abelii
ENSCVAG00000019629	-	77	54.264	ENSPCAG00000003723	ZFC3H1	69	53.788	Procavia_capensis
ENSCVAG00000019629	-	97	48.856	ENSPCOG00000019879	ZFC3H1	79	48.550	Propithecus_coquereli
ENSCVAG00000019629	-	88	47.981	ENSPVAG00000012354	ZFC3H1	89	47.981	Pteropus_vampyrus
ENSCVAG00000019629	-	98	67.260	ENSPNYG00000005977	ZFC3H1	99	67.211	Pundamilia_nyererei
ENSCVAG00000019629	-	95	50.826	ENSPNAG00000017704	-	96	53.774	Pygocentrus_nattereri
ENSCVAG00000019629	-	84	44.177	ENSRNOG00000053060	Zfc3h1	78	47.758	Rattus_norvegicus
ENSCVAG00000019629	-	95	48.715	ENSRBIG00000028462	ZFC3H1	98	48.500	Rhinopithecus_bieti
ENSCVAG00000019629	-	99	48.455	ENSRROG00000040039	ZFC3H1	99	48.423	Rhinopithecus_roxellana
ENSCVAG00000019629	-	99	48.818	ENSSBOG00000032676	ZFC3H1	99	42.850	Saimiri_boliviensis_boliviensis
ENSCVAG00000019629	-	98	49.045	ENSSHAG00000002431	ZFC3H1	95	50.501	Sarcophilus_harrisii
ENSCVAG00000019629	-	93	52.000	ENSSFOG00015018112	ZFC3H1	96	51.784	Scleropages_formosus
ENSCVAG00000019629	-	99	65.560	ENSSMAG00000019783	ZFC3H1	99	65.217	Scophthalmus_maximus
ENSCVAG00000019629	-	99	68.726	ENSSDUG00000000244	ZFC3H1	99	68.644	Seriola_dumerili
ENSCVAG00000019629	-	85	76.230	ENSSLDG00000018408	ZFC3H1	93	83.871	Seriola_lalandi_dorsalis
ENSCVAG00000019629	-	77	50.856	ENSSARG00000008639	ZFC3H1	69	51.921	Sorex_araneus
ENSCVAG00000019629	-	84	66.135	ENSSPAG00000001916	-	94	65.673	Stegastes_partitus
ENSCVAG00000019629	-	93	49.138	ENSSSCG00000000509	ZFC3H1	94	48.036	Sus_scrofa
ENSCVAG00000019629	-	99	44.481	ENSTGUG00000007206	ZFC3H1	93	45.134	Taeniopygia_guttata
ENSCVAG00000019629	-	62	62.932	ENSTRUG00000004528	-	95	64.089	Takifugu_rubripes
ENSCVAG00000019629	-	71	53.189	ENSTBEG00000016441	ZFC3H1	75	52.708	Tupaia_belangeri
ENSCVAG00000019629	-	92	47.599	ENSTTRG00000007328	ZFC3H1	88	47.124	Tursiops_truncatus
ENSCVAG00000019629	-	93	49.080	ENSUAMG00000001880	ZFC3H1	88	48.856	Ursus_americanus
ENSCVAG00000019629	-	93	49.018	ENSUMAG00000021131	ZFC3H1	89	48.794	Ursus_maritimus
ENSCVAG00000019629	-	90	49.200	ENSVVUG00000008655	ZFC3H1	94	48.609	Vulpes_vulpes
ENSCVAG00000019629	-	92	46.482	ENSXETG00000033302	ZFC3H1	92	45.255	Xenopus_tropicalis
ENSCVAG00000019629	-	100	82.655	ENSXMAG00000006933	-	100	82.798	Xiphophorus_maculatus