EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000019686 (Gene tree)
Gene ID: 107090213
Gene Symbol: kars
Alias: cb530|wu:fa16h02|zgc:92483
Full Name: lysyl-tRNA synthetase
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 10559 bases
Position: chrKL652785.1:79913-90471
Accession: 107090213
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000030854	tRNA_anti-codon	PF01336.25	1.7e-12	1	1
ENSCVAP00000016691	tRNA_anti-codon	PF01336.25	1.9e-12	1	1
ENSCVAP00000030854	tRNA-synt_2	PF00152.20	1.2e-78	1	1
ENSCVAP00000016691	tRNA-synt_2	PF00152.20	1.4e-78	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000032010	-	2586	XM_015383470	ENSCVAP00000016691	608 (aa)	XP_015238956	UPI0007428ECC
ENSCVAT00000025159	-	2503	XM_015383471	ENSCVAP00000030854	576 (aa)	XP_015238957	UPI0007429C5F

Gene Model

Click here to download ENSCVAG00000019686's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000019686's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000019686	kars	98	79.617	ENSG00000065427	KARS	100	87.255	Homo_sapiens
ENSCVAG00000019686	kars	100	89.931	ENSAPOG00000010997	kars	99	89.757	Acanthochromis_polyacanthus
ENSCVAG00000019686	kars	100	77.607	ENSAMEG00000005347	KARS	96	75.205	Ailuropoda_melanoleuca
ENSCVAG00000019686	kars	99	88.421	ENSACIG00000000304	kars	99	88.421	Amphilophus_citrinellus
ENSCVAG00000019686	kars	98	91.297	ENSAOCG00000012971	kars	98	90.678	Amphiprion_ocellaris
ENSCVAG00000019686	kars	100	90.988	ENSAPEG00000011144	kars	99	90.988	Amphiprion_percula
ENSCVAG00000019686	kars	99	91.053	ENSATEG00000004954	kars	99	91.053	Anabas_testudineus
ENSCVAG00000019686	kars	93	80.297	ENSAPLG00000012705	KARS	97	80.297	Anas_platyrhynchos
ENSCVAG00000019686	kars	97	78.712	ENSACAG00000007577	KARS	92	76.752	Anolis_carolinensis
ENSCVAG00000019686	kars	98	79.965	ENSANAG00000030403	-	96	79.965	Aotus_nancymaae
ENSCVAG00000019686	kars	97	66.375	ENSANAG00000031739	-	93	63.492	Aotus_nancymaae
ENSCVAG00000019686	kars	99	92.982	ENSACLG00000001613	kars	99	92.359	Astatotilapia_calliptera
ENSCVAG00000019686	kars	99	88.947	ENSAMXG00000030719	kars	99	88.947	Astyanax_mexicanus
ENSCVAG00000019686	kars	99	79.758	ENSBTAG00000015677	KARS	74	79.758	Bos_taurus
ENSCVAG00000019686	kars	97	60.394	WBGene00002238	kars-1	97	63.400	Caenorhabditis_elegans
ENSCVAG00000019686	kars	99	79.931	ENSCJAG00000014213	KARS	97	79.758	Callithrix_jacchus
ENSCVAG00000019686	kars	99	79.066	ENSCAFG00000020069	KARS	97	75.534	Canis_familiaris
ENSCVAG00000019686	kars	98	80.492	ENSCAFG00020001721	KARS	95	80.141	Canis_lupus_dingo
ENSCVAG00000019686	kars	99	79.931	ENSCHIG00000014108	-	97	79.931	Capra_hircus
ENSCVAG00000019686	kars	96	79.137	ENSCHIG00000016073	-	88	79.962	Capra_hircus
ENSCVAG00000019686	kars	97	81.206	ENSTSYG00000001643	KARS	96	81.115	Carlito_syrichta
ENSCVAG00000019686	kars	97	73.440	ENSCAPG00000016234	KARS	94	73.703	Cavia_aperea
ENSCVAG00000019686	kars	99	79.930	ENSCPOG00000012036	KARS	96	79.930	Cavia_porcellus
ENSCVAG00000019686	kars	98	80.139	ENSCCAG00000034307	-	96	79.965	Cebus_capucinus
ENSCVAG00000019686	kars	94	64.652	ENSCCAG00000030337	-	99	61.905	Cebus_capucinus
ENSCVAG00000019686	kars	98	78.735	ENSCATG00000038129	KARS	96	78.735	Cercocebus_atys
ENSCVAG00000019686	kars	99	78.920	ENSCLAG00000007905	KARS	96	78.746	Chinchilla_lanigera
ENSCVAG00000019686	kars	96	78.610	ENSCSAG00000003664	KARS	90	78.788	Chlorocebus_sabaeus
ENSCVAG00000019686	kars	78	85.333	ENSCHOG00000013447	KARS	72	85.333	Choloepus_hoffmanni
ENSCVAG00000019686	kars	99	80.594	ENSCPBG00000026969	KARS	97	80.594	Chrysemys_picta_bellii
ENSCVAG00000019686	kars	93	71.004	ENSCPBG00000002553	-	93	73.633	Chrysemys_picta_bellii
ENSCVAG00000019686	kars	99	67.832	ENSCING00000009513	-	99	67.832	Ciona_intestinalis
ENSCVAG00000019686	kars	99	69.177	ENSCSAVG00000007684	-	99	69.177	Ciona_savignyi
ENSCVAG00000019686	kars	55	72.188	ENSCSAVG00000001136	-	100	73.563	Ciona_savignyi
ENSCVAG00000019686	kars	97	75.265	ENSCANG00000032813	KARS	95	75.132	Colobus_angolensis_palliatus
ENSCVAG00000019686	kars	98	80.628	ENSCGRG00001004055	KARS	96	80.594	Cricetulus_griseus_chok1gshd
ENSCVAG00000019686	kars	98	80.628	ENSCGRG00000014242	KARS	96	80.594	Cricetulus_griseus_crigri
ENSCVAG00000019686	kars	99	91.404	ENSCSEG00000008324	kars	98	91.404	Cynoglossus_semilaevis
ENSCVAG00000019686	kars	99	88.576	ENSDARG00000103799	kars	98	90.927	Danio_rerio
ENSCVAG00000019686	kars	96	80.392	ENSDNOG00000002241	KARS	90	80.214	Dasypus_novemcinctus
ENSCVAG00000019686	kars	96	62.703	ENSDORG00000024214	-	96	62.703	Dipodomys_ordii
ENSCVAG00000019686	kars	99	79.094	ENSDORG00000004780	-	96	79.094	Dipodomys_ordii
ENSCVAG00000019686	kars	99	70.157	FBgn0027084	LysRS	99	70.157	Drosophila_melanogaster
ENSCVAG00000019686	kars	99	78.425	ENSETEG00000008353	KARS	98	75.000	Echinops_telfairi
ENSCVAG00000019686	kars	99	71.754	ENSEBUG00000001284	-	97	71.754	Eptatretus_burgeri
ENSCVAG00000019686	kars	99	80.245	ENSEASG00005013497	KARS	96	80.245	Equus_asinus_asinus
ENSCVAG00000019686	kars	99	80.245	ENSECAG00000013424	KARS	96	80.245	Equus_caballus
ENSCVAG00000019686	kars	99	72.396	ENSEEUG00000007042	KARS	94	71.259	Erinaceus_europaeus
ENSCVAG00000019686	kars	96	81.835	ENSELUG00000014575	kars	95	81.835	Esox_lucius
ENSCVAG00000019686	kars	99	79.304	ENSFCAG00000008573	KARS	97	78.866	Felis_catus
ENSCVAG00000019686	kars	100	78.024	ENSFALG00000002543	KARS	99	78.024	Ficedula_albicollis
ENSCVAG00000019686	kars	99	79.443	ENSFDAG00000007155	KARS	96	79.094	Fukomys_damarensis
ENSCVAG00000019686	kars	100	92.201	ENSFHEG00000006172	kars	100	92.201	Fundulus_heteroclitus
ENSCVAG00000019686	kars	97	88.036	ENSGMOG00000002633	kars	99	85.620	Gadus_morhua
ENSCVAG00000019686	kars	98	80.776	ENSGALG00000000907	KARS	97	81.329	Gallus_gallus
ENSCVAG00000019686	kars	100	93.934	ENSGAFG00000017252	kars	100	93.934	Gambusia_affinis
ENSCVAG00000019686	kars	100	89.138	ENSGACG00000015749	kars	100	87.908	Gasterosteus_aculeatus
ENSCVAG00000019686	kars	90	72.973	ENSGAGG00000011960	-	95	74.059	Gopherus_agassizii
ENSCVAG00000019686	kars	99	81.086	ENSGAGG00000023836	KARS	99	78.912	Gopherus_agassizii
ENSCVAG00000019686	kars	98	79.443	ENSGGOG00000005515	KARS	96	79.094	Gorilla_gorilla
ENSCVAG00000019686	kars	99	92.982	ENSHBUG00000013619	kars	99	92.359	Haplochromis_burtoni
ENSCVAG00000019686	kars	99	71.777	ENSHGLG00000015235	-	96	69.338	Heterocephalus_glaber_female
ENSCVAG00000019686	kars	99	64.483	ENSHGLG00000001298	-	96	64.483	Heterocephalus_glaber_female
ENSCVAG00000019686	kars	99	79.443	ENSHGLG00000011898	KARS	97	80.036	Heterocephalus_glaber_female
ENSCVAG00000019686	kars	99	64.310	ENSHGLG00100006466	-	96	64.310	Heterocephalus_glaber_male
ENSCVAG00000019686	kars	99	71.603	ENSHGLG00100012523	-	90	77.615	Heterocephalus_glaber_male
ENSCVAG00000019686	kars	99	79.443	ENSHGLG00100012264	KARS	96	79.443	Heterocephalus_glaber_male
ENSCVAG00000019686	kars	99	91.304	ENSHCOG00000002900	kars	96	91.304	Hippocampus_comes
ENSCVAG00000019686	kars	99	90.000	ENSIPUG00000009862	kars	99	90.000	Ictalurus_punctatus
ENSCVAG00000019686	kars	99	79.443	ENSSTOG00000004205	KARS	96	79.617	Ictidomys_tridecemlineatus
ENSCVAG00000019686	kars	99	78.866	ENSJJAG00000020406	Kars	99	78.866	Jaculus_jaculus
ENSCVAG00000019686	kars	99	92.267	ENSKMAG00000006434	kars	98	92.267	Kryptolebias_marmoratus
ENSCVAG00000019686	kars	99	92.632	ENSLBEG00000026537	kars	99	91.030	Labrus_bergylta
ENSCVAG00000019686	kars	88	76.087	ENSLACG00000016399	-	99	76.087	Latimeria_chalumnae
ENSCVAG00000019686	kars	98	82.832	ENSLACG00000006667	KARS	98	78.560	Latimeria_chalumnae
ENSCVAG00000019686	kars	98	87.873	ENSLOCG00000004002	kars	98	87.873	Lepisosteus_oculatus
ENSCVAG00000019686	kars	92	70.301	ENSLOCG00000013608	-	99	69.429	Lepisosteus_oculatus
ENSCVAG00000019686	kars	98	78.383	ENSLAFG00000015340	KARS	91	78.559	Loxodonta_africana
ENSCVAG00000019686	kars	98	78.746	ENSMFAG00000040024	KARS	96	78.746	Macaca_fascicularis
ENSCVAG00000019686	kars	98	78.746	ENSMNEG00000042879	-	96	78.746	Macaca_nemestrina
ENSCVAG00000019686	kars	87	76.031	ENSMNEG00000035832	-	98	76.031	Macaca_nemestrina
ENSCVAG00000019686	kars	98	78.746	ENSMLEG00000034947	KARS	96	78.746	Mandrillus_leucophaeus
ENSCVAG00000019686	kars	100	89.984	ENSMAMG00000021559	kars	99	89.984	Mastacembelus_armatus
ENSCVAG00000019686	kars	99	92.982	ENSMZEG00005014382	kars	99	92.359	Maylandia_zebra
ENSCVAG00000019686	kars	98	77.797	ENSMGAG00000009000	KARS	98	79.964	Meleagris_gallopavo
ENSCVAG00000019686	kars	99	79.487	ENSMICG00000011997	KARS	98	79.487	Microcebus_murinus
ENSCVAG00000019686	kars	99	79.756	ENSMOCG00000011829	Kars	96	79.756	Microtus_ochrogaster
ENSCVAG00000019686	kars	99	76.789	ENSMOCG00000019029	-	96	76.789	Microtus_ochrogaster
ENSCVAG00000019686	kars	96	91.697	ENSMMOG00000016934	kars	99	91.697	Mola_mola
ENSCVAG00000019686	kars	96	78.533	ENSMODG00000002215	-	97	78.712	Monodelphis_domestica
ENSCVAG00000019686	kars	98	73.158	ENSMODG00000002238	-	87	77.083	Monodelphis_domestica
ENSCVAG00000019686	kars	100	90.121	ENSMALG00000020858	kars	100	89.420	Monopterus_albus
ENSCVAG00000019686	kars	84	79.570	MGP_CAROLIEiJ_G0031588	Kars	99	79.515	Mus_caroli
ENSCVAG00000019686	kars	99	80.977	ENSMUSG00000031948	Kars	96	80.977	Mus_musculus
ENSCVAG00000019686	kars	99	80.454	MGP_PahariEiJ_G0023186	Kars	96	80.454	Mus_pahari
ENSCVAG00000019686	kars	99	80.803	MGP_SPRETEiJ_G0032706	Kars	96	80.803	Mus_spretus
ENSCVAG00000019686	kars	100	78.120	ENSMPUG00000009871	KARS	93	77.949	Mustela_putorius_furo
ENSCVAG00000019686	kars	81	52.368	ENSMLUG00000026871	-	77	52.368	Myotis_lucifugus
ENSCVAG00000019686	kars	97	80.247	ENSMLUG00000015119	-	95	78.883	Myotis_lucifugus
ENSCVAG00000019686	kars	98	79.720	ENSNGAG00000018820	-	96	79.371	Nannospalax_galili
ENSCVAG00000019686	kars	96	78.777	ENSNGAG00000022944	-	95	78.597	Nannospalax_galili
ENSCVAG00000019686	kars	99	92.807	ENSNBRG00000011098	kars	97	92.807	Neolamprologus_brichardi
ENSCVAG00000019686	kars	98	79.791	ENSNLEG00000013072	KARS	96	79.443	Nomascus_leucogenys
ENSCVAG00000019686	kars	96	76.757	ENSMEUG00000008684	KARS	97	73.090	Notamacropus_eugenii
ENSCVAG00000019686	kars	98	78.497	ENSOPRG00000012544	KARS	97	76.988	Ochotona_princeps
ENSCVAG00000019686	kars	99	80.314	ENSODEG00000013099	-	97	80.357	Octodon_degus
ENSCVAG00000019686	kars	96	57.220	ENSODEG00000009464	-	97	56.373	Octodon_degus
ENSCVAG00000019686	kars	99	92.807	ENSONIG00000005937	kars	98	92.807	Oreochromis_niloticus
ENSCVAG00000019686	kars	96	81.622	ENSOANG00000008179	KARS	94	81.622	Ornithorhynchus_anatinus
ENSCVAG00000019686	kars	99	74.042	ENSOCUG00000015553	KARS	96	74.042	Oryctolagus_cuniculus
ENSCVAG00000019686	kars	98	90.459	ENSORLG00000007627	kars	99	88.158	Oryzias_latipes
ENSCVAG00000019686	kars	98	90.459	ENSORLG00020010056	kars	99	88.322	Oryzias_latipes_hni
ENSCVAG00000019686	kars	98	90.459	ENSORLG00015008179	kars	99	88.322	Oryzias_latipes_hsok
ENSCVAG00000019686	kars	100	91.161	ENSOMEG00000001710	kars	99	91.161	Oryzias_melastigma
ENSCVAG00000019686	kars	100	72.666	ENSOGAG00000005903	KARS	94	72.666	Otolemur_garnettii
ENSCVAG00000019686	kars	93	78.832	ENSOARG00000006928	KARS	96	78.832	Ovis_aries
ENSCVAG00000019686	kars	98	79.268	ENSPPAG00000036192	KARS	96	78.920	Pan_paniscus
ENSCVAG00000019686	kars	99	79.478	ENSPPRG00000003027	KARS	97	79.038	Panthera_pardus
ENSCVAG00000019686	kars	99	79.304	ENSPTIG00000008011	KARS	97	78.866	Panthera_tigris_altaica
ENSCVAG00000019686	kars	98	79.443	ENSPTRG00000008364	KARS	96	79.094	Pan_troglodytes
ENSCVAG00000019686	kars	98	78.571	ENSPANG00000024106	KARS	90	78.966	Papio_anubis
ENSCVAG00000019686	kars	99	87.916	ENSPKIG00000009896	kars	99	87.916	Paramormyrops_kingsleyae
ENSCVAG00000019686	kars	89	74.464	ENSPSIG00000003041	-	94	74.464	Pelodiscus_sinensis
ENSCVAG00000019686	kars	96	80.755	ENSPSIG00000009294	KARS	96	81.115	Pelodiscus_sinensis
ENSCVAG00000019686	kars	97	91.786	ENSPMGG00000006117	kars	99	91.786	Periophthalmus_magnuspinnatus
ENSCVAG00000019686	kars	99	79.791	ENSPEMG00000012277	Kars	98	78.632	Peromyscus_maniculatus_bairdii
ENSCVAG00000019686	kars	98	74.028	ENSPMAG00000008360	-	91	74.205	Petromyzon_marinus
ENSCVAG00000019686	kars	98	75.923	ENSPCIG00000025469	-	89	77.901	Phascolarctos_cinereus
ENSCVAG00000019686	kars	98	79.196	ENSPCIG00000010761	-	96	79.196	Phascolarctos_cinereus
ENSCVAG00000019686	kars	99	93.844	ENSPFOG00000013253	kars	99	93.844	Poecilia_formosa
ENSCVAG00000019686	kars	99	94.903	ENSPLAG00000004189	kars	99	94.903	Poecilia_latipinna
ENSCVAG00000019686	kars	99	94.728	ENSPMEG00000015698	kars	99	94.728	Poecilia_mexicana
ENSCVAG00000019686	kars	99	94.903	ENSPREG00000023179	kars	99	94.903	Poecilia_reticulata
ENSCVAG00000019686	kars	96	79.501	ENSPPYG00000007567	KARS	90	79.323	Pongo_abelii
ENSCVAG00000019686	kars	88	75.494	ENSPCAG00000010790	KARS	97	75.494	Procavia_capensis
ENSCVAG00000019686	kars	99	73.822	ENSPCOG00000003166	KARS	86	84.416	Propithecus_coquereli
ENSCVAG00000019686	kars	96	80.570	ENSPVAG00000006746	KARS	90	80.749	Pteropus_vampyrus
ENSCVAG00000019686	kars	99	92.982	ENSPNYG00000013095	kars	99	92.359	Pundamilia_nyererei
ENSCVAG00000019686	kars	98	89.085	ENSPNAG00000013828	kars	98	89.085	Pygocentrus_nattereri
ENSCVAG00000019686	kars	97	79.396	ENSRNOG00000019456	Kars	92	78.709	Rattus_norvegicus
ENSCVAG00000019686	kars	98	78.735	ENSRBIG00000030118	KARS	96	78.735	Rhinopithecus_bieti
ENSCVAG00000019686	kars	98	78.735	ENSRROG00000041418	KARS	96	78.735	Rhinopithecus_roxellana
ENSCVAG00000019686	kars	96	56.228	YDR037W	KRS1	94	56.228	Saccharomyces_cerevisiae
ENSCVAG00000019686	kars	78	34.316	YNL073W	-	82	34.316	Saccharomyces_cerevisiae
ENSCVAG00000019686	kars	98	79.965	ENSSBOG00000019255	KARS	96	79.617	Saimiri_boliviensis_boliviensis
ENSCVAG00000019686	kars	98	65.664	ENSSHAG00000002050	-	95	62.890	Sarcophilus_harrisii
ENSCVAG00000019686	kars	92	69.565	ENSSHAG00000009005	-	95	69.565	Sarcophilus_harrisii
ENSCVAG00000019686	kars	96	74.373	ENSSHAG00000001359	-	99	73.427	Sarcophilus_harrisii
ENSCVAG00000019686	kars	95	88.869	ENSSFOG00015014837	kars	95	88.847	Scleropages_formosus
ENSCVAG00000019686	kars	99	91.228	ENSSMAG00000021441	kars	99	91.228	Scophthalmus_maximus
ENSCVAG00000019686	kars	99	93.333	ENSSDUG00000001202	kars	99	93.333	Seriola_dumerili
ENSCVAG00000019686	kars	96	92.986	ENSSLDG00000021220	kars	96	93.165	Seriola_lalandi_dorsalis
ENSCVAG00000019686	kars	75	89.524	ENSSARG00000011493	KARS	76	89.524	Sorex_araneus
ENSCVAG00000019686	kars	66	64.380	ENSSPUG00000000449	-	85	66.758	Sphenodon_punctatus
ENSCVAG00000019686	kars	99	80.172	ENSSPUG00000004974	KARS	97	80.172	Sphenodon_punctatus
ENSCVAG00000019686	kars	99	91.694	ENSSPAG00000020365	kars	96	92.793	Stegastes_partitus
ENSCVAG00000019686	kars	98	80.139	ENSSSCG00000002704	KARS	96	80.139	Sus_scrofa
ENSCVAG00000019686	kars	97	80.108	ENSTGUG00000008400	KARS	99	80.108	Taeniopygia_guttata
ENSCVAG00000019686	kars	100	83.553	ENSTRUG00000017551	kars	99	82.072	Takifugu_rubripes
ENSCVAG00000019686	kars	98	86.549	ENSTNIG00000009351	kars	97	85.133	Tetraodon_nigroviridis
ENSCVAG00000019686	kars	97	61.296	ENSTBEG00000004610	KARS	80	69.913	Tupaia_belangeri
ENSCVAG00000019686	kars	96	79.679	ENSTTRG00000001221	KARS	90	79.857	Tursiops_truncatus
ENSCVAG00000019686	kars	99	79.304	ENSUAMG00000017557	KARS	96	79.130	Ursus_americanus
ENSCVAG00000019686	kars	100	77.778	ENSUMAG00000014559	KARS	96	75.369	Ursus_maritimus
ENSCVAG00000019686	kars	99	76.776	ENSVPAG00000003716	KARS	94	75.253	Vicugna_pacos
ENSCVAG00000019686	kars	98	80.141	ENSVVUG00000024338	KARS	95	81.015	Vulpes_vulpes
ENSCVAG00000019686	kars	99	80.070	ENSXETG00000003569	kars	98	79.371	Xenopus_tropicalis
ENSCVAG00000019686	kars	96	94.918	ENSXCOG00000011313	kars	99	94.918	Xiphophorus_couchianus
ENSCVAG00000019686	kars	99	95.079	ENSXMAG00000003191	kars	99	95.079	Xiphophorus_maculatus