EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000019718 (Gene tree)
Gene ID: 107095311
Gene Symbol: -
Alias: zgc:92772
Full Name: ras-related protein Rab-11B-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 5550 bases
Position: chrKL653035.1:474116-479665
Accession: 107095311
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000016729	MMR_HSR1	PF01926.23	3.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000032031	-	1497	XM_015391335	ENSCVAP00000016729	218 (aa)	XP_015246821	UPI0007425C71

Gene Model

Click here to download ENSCVAG00000019718's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000019718's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000019718	-	100	94.954	ENSCVAG00000019751	-	100	94.954
ENSCVAG00000019718	-	75	43.636	ENSCVAG00000003539	rab12	83	37.559
ENSCVAG00000019718	-	80	45.402	ENSCVAG00000003537	si:dkey-16l2.16	98	41.627
ENSCVAG00000019718	-	75	39.535	ENSCVAG00000000862	-	76	39.535
ENSCVAG00000019718	-	71	33.125	ENSCVAG00000001150	si:dkey-13a21.4	77	33.125
ENSCVAG00000019718	-	80	38.547	ENSCVAG00000011665	rab33a	64	38.547
ENSCVAG00000019718	-	100	85.780	ENSCVAG00000013878	rab11a	100	85.780
ENSCVAG00000019718	-	78	39.884	ENSCVAG00000019227	zgc:101559	74	39.884
ENSCVAG00000019718	-	80	39.106	ENSCVAG00000016312	rab9a	82	39.106
ENSCVAG00000019718	-	96	40.000	ENSCVAG00000018085	rab30	97	40.000
ENSCVAG00000019718	-	74	45.679	ENSCVAG00000015451	rab18a	79	45.679
ENSCVAG00000019718	-	81	41.209	ENSCVAG00000021826	rab9b	87	41.209
ENSCVAG00000019718	-	77	54.386	ENSCVAG00000010727	rab4a	80	54.386
ENSCVAG00000019718	-	77	37.059	ENSCVAG00000011432	rabl2	74	37.059
ENSCVAG00000019718	-	74	34.545	ENSCVAG00000006083	si:cabz01085950.1	82	34.545
ENSCVAG00000019718	-	94	40.686	ENSCVAG00000008239	rab5aa	89	40.686
ENSCVAG00000019718	-	96	45.455	ENSCVAG00000022799	-	99	45.455
ENSCVAG00000019718	-	93	42.079	ENSCVAG00000022649	-	96	42.079
ENSCVAG00000019718	-	75	46.626	ENSCVAG00000009550	rab5c	89	40.580
ENSCVAG00000019718	-	83	71.823	ENSCVAG00000020003	rab25b	87	71.823
ENSCVAG00000019718	-	76	49.398	ENSCVAG00000012806	rab35b	94	44.560
ENSCVAG00000019718	-	74	44.099	ENSCVAG00000018433	rab22a	83	44.099
ENSCVAG00000019718	-	79	34.302	ENSCVAG00000020501	rab23	81	34.940
ENSCVAG00000019718	-	99	63.594	ENSCVAG00000008126	-	99	63.594
ENSCVAG00000019718	-	72	36.943	ENSCVAG00000001618	rab41	74	36.943
ENSCVAG00000019718	-	72	39.877	ENSCVAG00000000281	RAB7A	78	39.877
ENSCVAG00000019718	-	99	80.093	ENSCVAG00000020016	rab11al	99	80.093
ENSCVAG00000019718	-	88	47.938	ENSCVAG00000022353	rab14	90	47.938
ENSCVAG00000019718	-	83	45.355	ENSCVAG00000015862	-	86	45.355
ENSCVAG00000019718	-	74	30.061	ENSCVAG00000001281	rhebl1	88	30.061
ENSCVAG00000019718	-	94	31.944	ENSCVAG00000018191	rab34a	77	31.944
ENSCVAG00000019718	-	74	43.558	ENSCVAG00000014416	-	78	43.558
ENSCVAG00000019718	-	75	32.544	ENSCVAG00000014038	RAB29	82	32.544
ENSCVAG00000019718	-	70	35.484	ENSCVAG00000006062	KRAS	87	36.527
ENSCVAG00000019718	-	100	96.789	ENSCVAG00000017021	-	100	96.789
ENSCVAG00000019718	-	74	34.146	ENSCVAG00000008389	si:ch73-116o1.2	82	35.795
ENSCVAG00000019718	-	53	30.252	ENSCVAG00000020902	arl4cb	60	30.252
ENSCVAG00000019718	-	94	42.995	ENSCVAG00000014915	RAB39B	96	42.995
ENSCVAG00000019718	-	77	51.786	ENSCVAG00000009222	zgc:171927	79	51.786
ENSCVAG00000019718	-	72	35.669	ENSCVAG00000004751	rab6bb	75	35.669
ENSCVAG00000019718	-	73	43.396	ENSCVAG00000008276	RAB15	81	50.505
ENSCVAG00000019718	-	78	54.386	ENSCVAG00000017623	rab2a	81	54.386
ENSCVAG00000019718	-	79	34.286	ENSCVAG00000008670	hrasb	94	35.754
ENSCVAG00000019718	-	73	32.500	ENSCVAG00000004027	rheb	87	32.500
ENSCVAG00000019718	-	72	36.943	ENSCVAG00000022249	rab6a	75	36.943
ENSCVAG00000019718	-	72	35.669	ENSCVAG00000012889	rab6ba	75	35.669
ENSCVAG00000019718	-	89	47.449	ENSCVAG00000022585	-	96	47.449
ENSCVAG00000019718	-	72	39.877	ENSCVAG00000005429	-	78	39.877
ENSCVAG00000019718	-	95	32.883	ENSCVAG00000017064	si:dkey-34d22.5	97	32.883
ENSCVAG00000019718	-	72	40.994	ENSCVAG00000002953	RAB9A	80	40.994

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000019718	-	100	96.789	ENSAPOG00000023455	rab11bb	100	96.789	Acanthochromis_polyacanthus
ENSCVAG00000019718	-	100	84.862	ENSACIG00000019631	rab11bb	100	84.862	Amphilophus_citrinellus
ENSCVAG00000019718	-	100	99.083	ENSACIG00000024376	-	100	99.083	Amphilophus_citrinellus
ENSCVAG00000019718	-	100	99.083	ENSAOCG00000018849	-	100	99.083	Amphiprion_ocellaris
ENSCVAG00000019718	-	100	96.789	ENSAOCG00000018239	rab11bb	100	96.789	Amphiprion_ocellaris
ENSCVAG00000019718	-	100	96.789	ENSAPEG00000016590	rab11bb	100	96.789	Amphiprion_percula
ENSCVAG00000019718	-	100	98.624	ENSATEG00000023725	-	100	98.624	Anabas_testudineus
ENSCVAG00000019718	-	100	96.789	ENSATEG00000017696	rab11bb	100	96.789	Anabas_testudineus
ENSCVAG00000019718	-	94	97.573	ENSAPLG00000011046	-	94	97.573	Anas_platyrhynchos
ENSCVAG00000019718	-	100	99.083	ENSACLG00000005446	-	100	99.083	Astatotilapia_calliptera
ENSCVAG00000019718	-	100	96.789	ENSACLG00000007076	rab11bb	100	96.789	Astatotilapia_calliptera
ENSCVAG00000019718	-	100	98.165	ENSAMXG00000042655	rab11bb	100	98.165	Astyanax_mexicanus
ENSCVAG00000019718	-	100	95.872	ENSAMXG00000037623	-	100	95.872	Astyanax_mexicanus
ENSCVAG00000019718	-	100	95.872	ENSBTAG00000002475	RAB11B	100	95.872	Bos_taurus
ENSCVAG00000019718	-	96	94.258	ENSCHIG00000022426	-	93	94.258	Capra_hircus
ENSCVAG00000019718	-	100	95.872	ENSCATG00000029188	-	100	95.872	Cercocebus_atys
ENSCVAG00000019718	-	100	96.789	ENSCPBG00000017056	-	100	96.789	Chrysemys_picta_bellii
ENSCVAG00000019718	-	100	98.624	ENSCSEG00000007239	-	100	98.624	Cynoglossus_semilaevis
ENSCVAG00000019718	-	100	96.789	ENSCSEG00000012149	rab11bb	100	96.789	Cynoglossus_semilaevis
ENSCVAG00000019718	-	100	96.789	ENSDARG00000090086	rab11bb	100	96.789	Danio_rerio
ENSCVAG00000019718	-	99	93.548	ENSETEG00000000905	-	99	93.548	Echinops_telfairi
ENSCVAG00000019718	-	99	93.488	ENSEASG00005003708	-	99	93.488	Equus_asinus_asinus
ENSCVAG00000019718	-	99	93.488	ENSECAG00000000716	RAB11B	99	93.488	Equus_caballus
ENSCVAG00000019718	-	100	96.789	ENSELUG00000021148	rab11bb	100	96.789	Esox_lucius
ENSCVAG00000019718	-	100	97.706	ENSELUG00000020948	-	98	100.000	Esox_lucius
ENSCVAG00000019718	-	100	96.789	ENSELUG00000000916	-	100	96.789	Esox_lucius
ENSCVAG00000019718	-	100	96.789	ENSFALG00000011828	-	100	96.789	Ficedula_albicollis
ENSCVAG00000019718	-	100	96.789	ENSFHEG00000018353	rab11bb	100	96.789	Fundulus_heteroclitus
ENSCVAG00000019718	-	100	98.624	ENSFHEG00000022676	-	100	98.624	Fundulus_heteroclitus
ENSCVAG00000019718	-	99	94.444	ENSGMOG00000009668	-	99	94.444	Gadus_morhua
ENSCVAG00000019718	-	100	96.789	ENSGMOG00000009211	rab11bb	100	96.789	Gadus_morhua
ENSCVAG00000019718	-	100	96.789	ENSGALG00000000613	RAB11B	100	96.789	Gallus_gallus
ENSCVAG00000019718	-	100	96.789	ENSGAFG00000007102	rab11bb	100	96.789	Gambusia_affinis
ENSCVAG00000019718	-	100	96.330	ENSGACG00000015479	rab11bb	100	96.330	Gasterosteus_aculeatus
ENSCVAG00000019718	-	100	94.495	ENSGACG00000013297	-	99	94.495	Gasterosteus_aculeatus
ENSCVAG00000019718	-	100	95.872	ENSGGOG00000014516	RAB11B	100	95.872	Gorilla_gorilla
ENSCVAG00000019718	-	100	99.083	ENSHBUG00000009947	-	100	99.083	Haplochromis_burtoni
ENSCVAG00000019718	-	100	96.789	ENSHBUG00000014777	rab11bb	100	96.789	Haplochromis_burtoni
ENSCVAG00000019718	-	100	92.661	ENSHCOG00000000985	-	100	92.661	Hippocampus_comes
ENSCVAG00000019718	-	100	97.248	ENSHCOG00000002423	rab11bb	100	97.248	Hippocampus_comes
ENSCVAG00000019718	-	100	95.872	ENSHCOG00000000954	-	100	95.872	Hippocampus_comes
ENSCVAG00000019718	-	100	97.706	ENSIPUG00000019927	rab11bb	100	97.706	Ictalurus_punctatus
ENSCVAG00000019718	-	100	95.872	ENSIPUG00000025100	rab11b	100	95.872	Ictalurus_punctatus
ENSCVAG00000019718	-	100	99.083	ENSKMAG00000006170	-	100	99.083	Kryptolebias_marmoratus
ENSCVAG00000019718	-	100	96.789	ENSKMAG00000009033	rab11bb	100	96.789	Kryptolebias_marmoratus
ENSCVAG00000019718	-	100	96.789	ENSLBEG00000015248	rab11bb	100	96.789	Labrus_bergylta
ENSCVAG00000019718	-	100	98.165	ENSLBEG00000004172	-	100	98.165	Labrus_bergylta
ENSCVAG00000019718	-	100	90.826	ENSLBEG00000005981	-	100	90.826	Labrus_bergylta
ENSCVAG00000019718	-	100	96.789	ENSLACG00000016857	-	100	96.789	Latimeria_chalumnae
ENSCVAG00000019718	-	100	95.872	ENSMFAG00000003654	RAB11B	100	95.872	Macaca_fascicularis
ENSCVAG00000019718	-	100	95.872	ENSMLEG00000030601	-	100	95.872	Mandrillus_leucophaeus
ENSCVAG00000019718	-	100	96.330	ENSMAMG00000006378	rab11bb	100	96.330	Mastacembelus_armatus
ENSCVAG00000019718	-	100	97.706	ENSMAMG00000018533	-	100	97.706	Mastacembelus_armatus
ENSCVAG00000019718	-	100	99.083	ENSMZEG00005010975	-	100	99.083	Maylandia_zebra
ENSCVAG00000019718	-	100	96.789	ENSMZEG00005003352	rab11bb	100	96.789	Maylandia_zebra
ENSCVAG00000019718	-	100	95.872	ENSMICG00000034065	-	100	95.872	Microcebus_murinus
ENSCVAG00000019718	-	94	96.585	ENSMMOG00000007917	rab11bb	100	96.585	Mola_mola
ENSCVAG00000019718	-	100	99.083	ENSMMOG00000001250	-	100	99.083	Mola_mola
ENSCVAG00000019718	-	99	95.853	ENSMMOG00000001238	-	99	95.853	Mola_mola
ENSCVAG00000019718	-	100	96.789	ENSMODG00000003841	-	100	96.789	Monodelphis_domestica
ENSCVAG00000019718	-	100	96.789	ENSMALG00000022187	rab11bb	100	96.789	Monopterus_albus
ENSCVAG00000019718	-	94	87.923	ENSMLUG00000006677	-	100	87.923	Myotis_lucifugus
ENSCVAG00000019718	-	100	99.083	ENSNBRG00000023885	-	100	99.083	Neolamprologus_brichardi
ENSCVAG00000019718	-	100	96.789	ENSNBRG00000000372	rab11bb	100	96.789	Neolamprologus_brichardi
ENSCVAG00000019718	-	100	96.789	ENSMEUG00000003686	-	100	96.789	Notamacropus_eugenii
ENSCVAG00000019718	-	100	96.789	ENSONIG00000010435	rab11bb	100	96.789	Oreochromis_niloticus
ENSCVAG00000019718	-	100	99.083	ENSONIG00000002544	-	100	99.083	Oreochromis_niloticus
ENSCVAG00000019718	-	52	94.737	ENSOANG00000031567	-	82	94.737	Ornithorhynchus_anatinus
ENSCVAG00000019718	-	100	96.330	ENSORLG00000013938	rab11bb	100	96.330	Oryzias_latipes
ENSCVAG00000019718	-	99	97.235	ENSORLG00000015284	-	72	97.235	Oryzias_latipes
ENSCVAG00000019718	-	99	97.235	ENSORLG00020020844	RAB11B	99	97.235	Oryzias_latipes_hni
ENSCVAG00000019718	-	100	96.330	ENSORLG00020019393	rab11bb	100	96.330	Oryzias_latipes_hni
ENSCVAG00000019718	-	100	96.330	ENSORLG00015020173	rab11bb	100	96.330	Oryzias_latipes_hsok
ENSCVAG00000019718	-	99	97.235	ENSORLG00015016999	RAB11B	99	97.235	Oryzias_latipes_hsok
ENSCVAG00000019718	-	100	96.789	ENSOMEG00000017806	-	100	96.789	Oryzias_melastigma
ENSCVAG00000019718	-	100	98.165	ENSOMEG00000002562	-	100	98.165	Oryzias_melastigma
ENSCVAG00000019718	-	100	95.872	ENSPPAG00000028589	-	100	95.872	Pan_paniscus
ENSCVAG00000019718	-	100	95.872	ENSPTRG00000010422	RAB11B	100	95.872	Pan_troglodytes
ENSCVAG00000019718	-	100	95.872	ENSPANG00000007765	-	100	95.872	Papio_anubis
ENSCVAG00000019718	-	98	96.262	ENSPKIG00000001389	-	69	96.262	Paramormyrops_kingsleyae
ENSCVAG00000019718	-	100	96.789	ENSPKIG00000011640	rab11bb	100	96.789	Paramormyrops_kingsleyae
ENSCVAG00000019718	-	100	96.330	ENSPKIG00000011703	-	100	96.330	Paramormyrops_kingsleyae
ENSCVAG00000019718	-	98	92.694	ENSPSIG00000010242	-	85	92.694	Pelodiscus_sinensis
ENSCVAG00000019718	-	100	96.789	ENSPMGG00000009435	rab11bb	100	96.789	Periophthalmus_magnuspinnatus
ENSCVAG00000019718	-	99	94.470	ENSPMGG00000014336	-	99	94.470	Periophthalmus_magnuspinnatus
ENSCVAG00000019718	-	100	97.248	ENSPMGG00000014333	-	100	97.248	Periophthalmus_magnuspinnatus
ENSCVAG00000019718	-	97	96.226	ENSPCIG00000020371	-	99	96.226	Phascolarctos_cinereus
ENSCVAG00000019718	-	100	99.083	ENSPFOG00000006224	-	100	99.083	Poecilia_formosa
ENSCVAG00000019718	-	100	96.789	ENSPFOG00000024114	-	100	96.789	Poecilia_formosa
ENSCVAG00000019718	-	100	96.789	ENSPLAG00000001598	rab11bb	100	96.789	Poecilia_latipinna
ENSCVAG00000019718	-	100	99.083	ENSPLAG00000014207	-	100	99.083	Poecilia_latipinna
ENSCVAG00000019718	-	100	99.083	ENSPMEG00000007842	-	100	99.083	Poecilia_mexicana
ENSCVAG00000019718	-	100	96.789	ENSPMEG00000012389	rab11bb	100	96.789	Poecilia_mexicana
ENSCVAG00000019718	-	100	96.789	ENSPREG00000014269	rab11bb	100	96.789	Poecilia_reticulata
ENSCVAG00000019718	-	100	98.624	ENSPREG00000006336	-	100	98.624	Poecilia_reticulata
ENSCVAG00000019718	-	100	96.789	ENSPNYG00000004098	rab11bb	100	96.789	Pundamilia_nyererei
ENSCVAG00000019718	-	100	99.083	ENSPNYG00000019611	-	100	99.083	Pundamilia_nyererei
ENSCVAG00000019718	-	100	95.872	ENSRROG00000037812	-	100	95.872	Rhinopithecus_roxellana
ENSCVAG00000019718	-	97	95.755	ENSSHAG00000006816	-	97	95.755	Sarcophilus_harrisii
ENSCVAG00000019718	-	100	97.248	ENSSFOG00015009042	rab11bb	100	97.248	Scleropages_formosus
ENSCVAG00000019718	-	100	72.936	ENSSFOG00015006245	-	100	72.936	Scleropages_formosus
ENSCVAG00000019718	-	100	95.413	ENSSMAG00000018613	-	100	95.413	Scophthalmus_maximus
ENSCVAG00000019718	-	100	96.330	ENSSMAG00000004922	rab11bb	100	96.330	Scophthalmus_maximus
ENSCVAG00000019718	-	100	96.789	ENSSDUG00000013558	rab11bb	100	96.789	Seriola_dumerili
ENSCVAG00000019718	-	100	99.083	ENSSDUG00000002934	-	100	99.083	Seriola_dumerili
ENSCVAG00000019718	-	100	99.083	ENSSLDG00000005275	-	100	99.083	Seriola_lalandi_dorsalis
ENSCVAG00000019718	-	100	96.789	ENSSLDG00000020676	rab11bb	100	96.789	Seriola_lalandi_dorsalis
ENSCVAG00000019718	-	100	96.789	ENSSPUG00000002243	-	100	96.789	Sphenodon_punctatus
ENSCVAG00000019718	-	100	96.789	ENSSPAG00000011419	rab11bb	100	96.789	Stegastes_partitus
ENSCVAG00000019718	-	100	99.083	ENSSPAG00000014559	-	100	99.083	Stegastes_partitus
ENSCVAG00000019718	-	100	96.789	ENSTGUG00000000084	-	100	96.789	Taeniopygia_guttata
ENSCVAG00000019718	-	100	96.789	ENSTRUG00000022029	rab11bb	100	96.789	Takifugu_rubripes
ENSCVAG00000019718	-	99	98.611	ENSTRUG00000021619	-	100	98.611	Takifugu_rubripes
ENSCVAG00000019718	-	99	95.853	ENSTRUG00000021614	-	99	95.853	Takifugu_rubripes
ENSCVAG00000019718	-	99	98.611	ENSTNIG00000013182	-	100	98.611	Tetraodon_nigroviridis
ENSCVAG00000019718	-	99	95.392	ENSTNIG00000013184	-	99	95.392	Tetraodon_nigroviridis
ENSCVAG00000019718	-	100	95.872	ENSTNIG00000011081	rab11bb	100	95.872	Tetraodon_nigroviridis
ENSCVAG00000019718	-	93	96.059	ENSTNIG00000002003	-	100	96.059	Tetraodon_nigroviridis
ENSCVAG00000019718	-	94	96.585	ENSUAMG00000006639	-	99	96.585	Ursus_americanus
ENSCVAG00000019718	-	100	95.890	ENSXETG00000025484	rab11b.1	99	95.890	Xenopus_tropicalis
ENSCVAG00000019718	-	100	96.789	ENSXCOG00000008042	-	100	96.789	Xiphophorus_couchianus
ENSCVAG00000019718	-	100	99.083	ENSXCOG00000009190	-	100	99.083	Xiphophorus_couchianus
ENSCVAG00000019718	-	100	96.789	ENSXMAG00000011926	rab11bb	100	96.789	Xiphophorus_maculatus
ENSCVAG00000019718	-	100	98.624	ENSXMAG00000024840	-	100	98.624	Xiphophorus_maculatus