EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000019739 (Gene tree)
Gene ID: 107084387
Gene Symbol: cstf3
Alias: cleavage stimulation factor|3 pre-RNA|subunit 3|wu:fa99c02|wu:fb18b09|zgc:56028
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 12404 bases
Position: chrKL652505.1:1859166-1871569
Accession: 107084387
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000030856	Suf	PF05843.14	1.1e-83	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000025161	-	2717	XM_015374201	ENSCVAP00000030856	716 (aa)	XP_015229687	UPI000742CDA1

Gene Model

Click here to download ENSCVAG00000019739's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000019739's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000019739	cstf3	100	90.251	ENSG00000176102	CSTF3	100	90.251	Homo_sapiens
ENSCVAG00000019739	cstf3	100	97.067	ENSAPOG00000014054	cstf3	100	97.067	Acanthochromis_polyacanthus
ENSCVAG00000019739	cstf3	99	90.678	ENSAMEG00000007187	CSTF3	98	90.678	Ailuropoda_melanoleuca
ENSCVAG00000019739	cstf3	87	91.814	ENSACIG00000005539	cstf3	100	91.814	Amphilophus_citrinellus
ENSCVAG00000019739	cstf3	100	96.927	ENSAOCG00000010930	cstf3	100	96.927	Amphiprion_ocellaris
ENSCVAG00000019739	cstf3	100	96.927	ENSAPEG00000007903	cstf3	100	96.927	Amphiprion_percula
ENSCVAG00000019739	cstf3	100	96.369	ENSATEG00000000190	cstf3	100	96.369	Anabas_testudineus
ENSCVAG00000019739	cstf3	99	90.819	ENSAPLG00000007217	CSTF3	100	90.819	Anas_platyrhynchos
ENSCVAG00000019739	cstf3	100	90.947	ENSACAG00000002823	CSTF3	100	90.947	Anolis_carolinensis
ENSCVAG00000019739	cstf3	100	90.251	ENSANAG00000020699	CSTF3	100	90.251	Aotus_nancymaae
ENSCVAG00000019739	cstf3	100	96.229	ENSACLG00000007820	cstf3	100	96.229	Astatotilapia_calliptera
ENSCVAG00000019739	cstf3	100	91.643	ENSAMXG00000014198	cstf3	100	91.922	Astyanax_mexicanus
ENSCVAG00000019739	cstf3	100	90.251	ENSBTAG00000008617	CSTF3	100	90.504	Bos_taurus
ENSCVAG00000019739	cstf3	97	47.619	WBGene00006307	suf-1	99	47.619	Caenorhabditis_elegans
ENSCVAG00000019739	cstf3	100	90.251	ENSCJAG00000005533	CSTF3	100	90.251	Callithrix_jacchus
ENSCVAG00000019739	cstf3	100	90.251	ENSCAFG00000007264	CSTF3	100	90.251	Canis_familiaris
ENSCVAG00000019739	cstf3	99	90.819	ENSCAFG00020002715	CSTF3	98	90.819	Canis_lupus_dingo
ENSCVAG00000019739	cstf3	98	89.331	ENSCHIG00000016418	CSTF3	100	90.240	Capra_hircus
ENSCVAG00000019739	cstf3	99	91.102	ENSTSYG00000000451	CSTF3	99	95.546	Carlito_syrichta
ENSCVAG00000019739	cstf3	83	87.678	ENSCAPG00000010958	CSTF3	98	87.678	Cavia_aperea
ENSCVAG00000019739	cstf3	100	90.390	ENSCPOG00000005545	CSTF3	100	90.476	Cavia_porcellus
ENSCVAG00000019739	cstf3	100	90.251	ENSCCAG00000024790	CSTF3	96	95.546	Cebus_capucinus
ENSCVAG00000019739	cstf3	100	90.251	ENSCATG00000007080	CSTF3	100	90.251	Cercocebus_atys
ENSCVAG00000019739	cstf3	100	90.251	ENSCLAG00000016179	CSTF3	100	90.251	Chinchilla_lanigera
ENSCVAG00000019739	cstf3	78	96.241	ENSCHOG00000002497	CSTF3	79	96.241	Choloepus_hoffmanni
ENSCVAG00000019739	cstf3	100	90.390	ENSCPBG00000006753	CSTF3	100	90.390	Chrysemys_picta_bellii
ENSCVAG00000019739	cstf3	99	61.859	ENSCING00000006401	-	99	61.997	Ciona_intestinalis
ENSCVAG00000019739	cstf3	98	61.322	ENSCSAVG00000004851	-	100	61.322	Ciona_savignyi
ENSCVAG00000019739	cstf3	100	90.251	ENSCANG00000035468	CSTF3	100	90.251	Colobus_angolensis_palliatus
ENSCVAG00000019739	cstf3	100	90.111	ENSCGRG00001014773	Cstf3	100	90.111	Cricetulus_griseus_chok1gshd
ENSCVAG00000019739	cstf3	100	90.111	ENSCGRG00000004142	Cstf3	100	90.111	Cricetulus_griseus_crigri
ENSCVAG00000019739	cstf3	100	95.810	ENSCSEG00000014283	cstf3	100	95.810	Cynoglossus_semilaevis
ENSCVAG00000019739	cstf3	100	93.305	ENSDARG00000018904	cstf3	100	93.305	Danio_rerio
ENSCVAG00000019739	cstf3	99	90.819	ENSDNOG00000007366	CSTF3	99	90.819	Dasypus_novemcinctus
ENSCVAG00000019739	cstf3	99	83.216	ENSDORG00000005898	Cstf3	99	83.216	Dipodomys_ordii
ENSCVAG00000019739	cstf3	99	56.224	FBgn0003559	su(f)	99	56.224	Drosophila_melanogaster
ENSCVAG00000019739	cstf3	89	85.047	ENSETEG00000017097	CSTF3	90	85.047	Echinops_telfairi
ENSCVAG00000019739	cstf3	84	73.964	ENSEBUG00000015459	cstf3	96	73.964	Eptatretus_burgeri
ENSCVAG00000019739	cstf3	99	89.407	ENSEASG00005019884	CSTF3	96	95.546	Equus_asinus_asinus
ENSCVAG00000019739	cstf3	99	89.407	ENSECAG00000023338	CSTF3	96	95.546	Equus_caballus
ENSCVAG00000019739	cstf3	100	85.376	ENSEEUG00000015167	CSTF3	100	85.376	Erinaceus_europaeus
ENSCVAG00000019739	cstf3	100	93.863	ENSELUG00000023393	cstf3	100	93.863	Esox_lucius
ENSCVAG00000019739	cstf3	100	90.390	ENSFCAG00000030711	CSTF3	100	90.390	Felis_catus
ENSCVAG00000019739	cstf3	92	92.760	ENSFALG00000010764	CSTF3	100	89.555	Ficedula_albicollis
ENSCVAG00000019739	cstf3	100	90.390	ENSFDAG00000012082	CSTF3	100	90.390	Fukomys_damarensis
ENSCVAG00000019739	cstf3	100	98.464	ENSFHEG00000020623	cstf3	100	98.464	Fundulus_heteroclitus
ENSCVAG00000019739	cstf3	100	93.315	ENSGMOG00000012275	cstf3	100	93.315	Gadus_morhua
ENSCVAG00000019739	cstf3	100	90.111	ENSGALG00000011685	CSTF3	100	90.111	Gallus_gallus
ENSCVAG00000019739	cstf3	100	98.743	ENSGAFG00000002181	cstf3	100	98.743	Gambusia_affinis
ENSCVAG00000019739	cstf3	100	95.531	ENSGACG00000015997	cstf3	100	95.531	Gasterosteus_aculeatus
ENSCVAG00000019739	cstf3	100	90.390	ENSGAGG00000006200	CSTF3	100	90.390	Gopherus_agassizii
ENSCVAG00000019739	cstf3	99	85.028	ENSGGOG00000026591	CSTF3	96	90.646	Gorilla_gorilla
ENSCVAG00000019739	cstf3	100	96.369	ENSHBUG00000016656	cstf3	100	96.369	Haplochromis_burtoni
ENSCVAG00000019739	cstf3	100	90.251	ENSHGLG00000017834	CSTF3	100	90.251	Heterocephalus_glaber_female
ENSCVAG00000019739	cstf3	100	90.251	ENSHGLG00100018042	CSTF3	100	90.251	Heterocephalus_glaber_male
ENSCVAG00000019739	cstf3	100	92.039	ENSHCOG00000015218	cstf3	100	92.039	Hippocampus_comes
ENSCVAG00000019739	cstf3	100	92.887	ENSIPUG00000013170	CSTF3	100	92.887	Ictalurus_punctatus
ENSCVAG00000019739	cstf3	100	90.251	ENSSTOG00000013306	CSTF3	100	90.251	Ictidomys_tridecemlineatus
ENSCVAG00000019739	cstf3	99	80.224	ENSJJAG00000018430	Cstf3	99	80.224	Jaculus_jaculus
ENSCVAG00000019739	cstf3	100	94.553	ENSKMAG00000010916	cstf3	100	94.553	Kryptolebias_marmoratus
ENSCVAG00000019739	cstf3	100	95.531	ENSLBEG00000002306	cstf3	100	95.531	Labrus_bergylta
ENSCVAG00000019739	cstf3	100	89.679	ENSLACG00000017296	CSTF3	100	89.679	Latimeria_chalumnae
ENSCVAG00000019739	cstf3	100	93.593	ENSLOCG00000004415	cstf3	100	93.593	Lepisosteus_oculatus
ENSCVAG00000019739	cstf3	100	90.111	ENSLAFG00000008712	CSTF3	100	90.111	Loxodonta_africana
ENSCVAG00000019739	cstf3	100	90.251	ENSMFAG00000029516	CSTF3	100	90.251	Macaca_fascicularis
ENSCVAG00000019739	cstf3	100	90.251	ENSMMUG00000002542	CSTF3	100	90.251	Macaca_mulatta
ENSCVAG00000019739	cstf3	100	90.251	ENSMNEG00000021807	CSTF3	100	90.251	Macaca_nemestrina
ENSCVAG00000019739	cstf3	100	90.251	ENSMLEG00000039594	CSTF3	97	93.318	Mandrillus_leucophaeus
ENSCVAG00000019739	cstf3	100	96.369	ENSMAMG00000020423	cstf3	100	96.369	Mastacembelus_armatus
ENSCVAG00000019739	cstf3	100	96.229	ENSMZEG00005012082	cstf3	100	96.229	Maylandia_zebra
ENSCVAG00000019739	cstf3	100	89.972	ENSMGAG00000001383	CSTF3	100	89.972	Meleagris_gallopavo
ENSCVAG00000019739	cstf3	100	89.972	ENSMAUG00000002487	Cstf3	100	89.972	Mesocricetus_auratus
ENSCVAG00000019739	cstf3	100	90.251	ENSMICG00000004784	CSTF3	100	90.251	Microcebus_murinus
ENSCVAG00000019739	cstf3	100	90.111	ENSMOCG00000017583	Cstf3	100	90.111	Microtus_ochrogaster
ENSCVAG00000019739	cstf3	99	96.045	ENSMMOG00000016026	cstf3	95	96.045	Mola_mola
ENSCVAG00000019739	cstf3	100	90.390	ENSMODG00000009745	-	100	90.390	Monodelphis_domestica
ENSCVAG00000019739	cstf3	99	80.112	ENSMODG00000025205	-	99	80.112	Monodelphis_domestica
ENSCVAG00000019739	cstf3	100	96.369	ENSMALG00000012050	cstf3	100	96.369	Monopterus_albus
ENSCVAG00000019739	cstf3	100	90.111	MGP_CAROLIEiJ_G0024026	Cstf3	100	90.111	Mus_caroli
ENSCVAG00000019739	cstf3	100	90.111	ENSMUSG00000027176	Cstf3	100	90.111	Mus_musculus
ENSCVAG00000019739	cstf3	100	90.111	MGP_PahariEiJ_G0025464	Cstf3	100	90.111	Mus_pahari
ENSCVAG00000019739	cstf3	100	90.111	MGP_SPRETEiJ_G0024939	Cstf3	100	90.111	Mus_spretus
ENSCVAG00000019739	cstf3	100	90.111	ENSMPUG00000011457	CSTF3	100	90.111	Mustela_putorius_furo
ENSCVAG00000019739	cstf3	100	87.744	ENSMLUG00000026022	-	100	87.744	Myotis_lucifugus
ENSCVAG00000019739	cstf3	99	90.819	ENSMLUG00000003073	-	99	90.819	Myotis_lucifugus
ENSCVAG00000019739	cstf3	100	90.111	ENSNGAG00000010677	Cstf3	100	90.111	Nannospalax_galili
ENSCVAG00000019739	cstf3	87	96.790	ENSNBRG00000007345	cstf3	100	96.790	Neolamprologus_brichardi
ENSCVAG00000019739	cstf3	100	90.251	ENSNLEG00000017901	CSTF3	100	90.251	Nomascus_leucogenys
ENSCVAG00000019739	cstf3	73	89.484	ENSMEUG00000005640	-	100	89.484	Notamacropus_eugenii
ENSCVAG00000019739	cstf3	67	88.158	ENSOPRG00000000199	-	67	88.158	Ochotona_princeps
ENSCVAG00000019739	cstf3	89	78.774	ENSODEG00000006311	-	97	78.774	Octodon_degus
ENSCVAG00000019739	cstf3	100	90.251	ENSODEG00000016737	-	100	90.251	Octodon_degus
ENSCVAG00000019739	cstf3	100	96.229	ENSONIG00000005563	cstf3	100	96.229	Oreochromis_niloticus
ENSCVAG00000019739	cstf3	90	89.846	ENSOANG00000015140	CSTF3	100	89.846	Ornithorhynchus_anatinus
ENSCVAG00000019739	cstf3	100	89.972	ENSOCUG00000015417	CSTF3	100	89.972	Oryctolagus_cuniculus
ENSCVAG00000019739	cstf3	100	95.251	ENSORLG00000009762	cstf3	100	95.251	Oryzias_latipes
ENSCVAG00000019739	cstf3	100	95.251	ENSORLG00020005540	cstf3	100	95.251	Oryzias_latipes_hni
ENSCVAG00000019739	cstf3	100	95.112	ENSORLG00015003551	cstf3	100	95.112	Oryzias_latipes_hsok
ENSCVAG00000019739	cstf3	100	96.089	ENSOMEG00000003848	cstf3	100	96.089	Oryzias_melastigma
ENSCVAG00000019739	cstf3	100	89.875	ENSOGAG00000010229	CSTF3	100	89.875	Otolemur_garnettii
ENSCVAG00000019739	cstf3	90	90.358	ENSOARG00000017271	CSTF3	99	90.358	Ovis_aries
ENSCVAG00000019739	cstf3	99	87.429	ENSPPAG00000027358	CSTF3	99	87.429	Pan_paniscus
ENSCVAG00000019739	cstf3	100	90.390	ENSPPRG00000016852	CSTF3	100	90.390	Panthera_pardus
ENSCVAG00000019739	cstf3	100	90.390	ENSPTIG00000008716	CSTF3	100	90.390	Panthera_tigris_altaica
ENSCVAG00000019739	cstf3	100	90.251	ENSPTRG00000003485	CSTF3	100	90.251	Pan_troglodytes
ENSCVAG00000019739	cstf3	100	90.251	ENSPANG00000013722	CSTF3	97	93.318	Papio_anubis
ENSCVAG00000019739	cstf3	100	93.026	ENSPKIG00000023648	cstf3	100	93.026	Paramormyrops_kingsleyae
ENSCVAG00000019739	cstf3	100	90.390	ENSPSIG00000009173	CSTF3	100	90.390	Pelodiscus_sinensis
ENSCVAG00000019739	cstf3	77	97.080	ENSPMGG00000000164	cstf3	99	97.080	Periophthalmus_magnuspinnatus
ENSCVAG00000019739	cstf3	100	89.972	ENSPEMG00000011481	Cstf3	100	89.972	Peromyscus_maniculatus_bairdii
ENSCVAG00000019739	cstf3	99	79.014	ENSPMAG00000007282	cstf3	100	78.611	Petromyzon_marinus
ENSCVAG00000019739	cstf3	100	75.661	ENSPCIG00000030419	-	90	75.939	Phascolarctos_cinereus
ENSCVAG00000019739	cstf3	100	87.761	ENSPCIG00000026406	-	100	90.720	Phascolarctos_cinereus
ENSCVAG00000019739	cstf3	100	98.743	ENSPFOG00000017239	cstf3	100	98.743	Poecilia_formosa
ENSCVAG00000019739	cstf3	100	98.603	ENSPLAG00000009456	cstf3	100	98.603	Poecilia_latipinna
ENSCVAG00000019739	cstf3	100	98.743	ENSPMEG00000010320	cstf3	100	98.743	Poecilia_mexicana
ENSCVAG00000019739	cstf3	100	98.603	ENSPREG00000013549	cstf3	100	98.603	Poecilia_reticulata
ENSCVAG00000019739	cstf3	100	90.251	ENSPPYG00000003375	CSTF3	100	90.251	Pongo_abelii
ENSCVAG00000019739	cstf3	71	94.774	ENSPCAG00000008025	-	71	94.774	Procavia_capensis
ENSCVAG00000019739	cstf3	100	85.376	ENSPCOG00000014417	CSTF3	100	85.376	Propithecus_coquereli
ENSCVAG00000019739	cstf3	100	85.097	ENSPVAG00000002350	CSTF3	100	85.097	Pteropus_vampyrus
ENSCVAG00000019739	cstf3	100	96.369	ENSPNYG00000018259	cstf3	100	96.369	Pundamilia_nyererei
ENSCVAG00000019739	cstf3	100	93.724	ENSPNAG00000020182	cstf3	100	93.724	Pygocentrus_nattereri
ENSCVAG00000019739	cstf3	87	89.760	ENSRNOG00000012089	Cstf3	100	89.760	Rattus_norvegicus
ENSCVAG00000019739	cstf3	99	89.407	ENSRBIG00000044258	CSTF3	100	90.240	Rhinopithecus_bieti
ENSCVAG00000019739	cstf3	100	90.251	ENSRROG00000043450	CSTF3	100	90.251	Rhinopithecus_roxellana
ENSCVAG00000019739	cstf3	100	90.251	ENSSBOG00000024764	CSTF3	98	95.546	Saimiri_boliviensis_boliviensis
ENSCVAG00000019739	cstf3	99	90.490	ENSSHAG00000018128	-	99	90.490	Sarcophilus_harrisii
ENSCVAG00000019739	cstf3	100	81.337	ENSSHAG00000003135	-	99	81.337	Sarcophilus_harrisii
ENSCVAG00000019739	cstf3	100	93.584	ENSSFOG00015022133	cstf3	100	93.584	Scleropages_formosus
ENSCVAG00000019739	cstf3	100	96.089	ENSSMAG00000002197	cstf3	100	96.089	Scophthalmus_maximus
ENSCVAG00000019739	cstf3	100	96.788	ENSSDUG00000020426	cstf3	100	96.788	Seriola_dumerili
ENSCVAG00000019739	cstf3	100	97.067	ENSSLDG00000025649	cstf3	100	97.067	Seriola_lalandi_dorsalis
ENSCVAG00000019739	cstf3	100	90.111	ENSSARG00000000391	CSTF3	100	90.111	Sorex_araneus
ENSCVAG00000019739	cstf3	96	90.159	ENSSPUG00000010546	CSTF3	100	90.159	Sphenodon_punctatus
ENSCVAG00000019739	cstf3	100	96.927	ENSSPAG00000004958	cstf3	100	96.927	Stegastes_partitus
ENSCVAG00000019739	cstf3	99	90.042	ENSSSCG00000040954	CSTF3	99	90.042	Sus_scrofa
ENSCVAG00000019739	cstf3	99	90.395	ENSTGUG00000005010	CSTF3	100	90.395	Taeniopygia_guttata
ENSCVAG00000019739	cstf3	100	94.832	ENSTRUG00000004959	cstf3	100	94.832	Takifugu_rubripes
ENSCVAG00000019739	cstf3	99	96.186	ENSTNIG00000013811	cstf3	99	96.186	Tetraodon_nigroviridis
ENSCVAG00000019739	cstf3	89	87.850	ENSTBEG00000001544	CSTF3	90	87.850	Tupaia_belangeri
ENSCVAG00000019739	cstf3	100	87.465	ENSTTRG00000016366	CSTF3	100	87.465	Tursiops_truncatus
ENSCVAG00000019739	cstf3	99	90.537	ENSUMAG00000018971	CSTF3	100	89.920	Ursus_maritimus
ENSCVAG00000019739	cstf3	100	90.111	ENSVPAG00000007800	CSTF3	100	90.111	Vicugna_pacos
ENSCVAG00000019739	cstf3	99	90.819	ENSVVUG00000014938	CSTF3	100	90.240	Vulpes_vulpes
ENSCVAG00000019739	cstf3	88	75.000	ENSXETG00000021399	cstf3	100	75.890	Xenopus_tropicalis
ENSCVAG00000019739	cstf3	66	42.116	ENSXETG00000017946	-	99	42.116	Xenopus_tropicalis
ENSCVAG00000019739	cstf3	87	98.555	ENSXCOG00000011741	cstf3	100	98.555	Xiphophorus_couchianus
ENSCVAG00000019739	cstf3	100	98.743	ENSXMAG00000009545	cstf3	100	98.743	Xiphophorus_maculatus