EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000019758 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 8930 bases
Position: chrKL653552.1:28773-37702
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000030894	RVT_1	PF00078.27	2.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000025226	-	429	-	ENSCVAP00000030894	142 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000019758's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000019758's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000019758	-	90	47.328	ENSCVAG00000018200	-	80	47.328

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000019758	-	79	43.796	ENSAPEG00000008260	-	58	43.796	Amphiprion_percula
ENSCVAG00000019758	-	79	49.635	ENSAPEG00000001164	-	53	49.635	Amphiprion_percula
ENSCVAG00000019758	-	79	58.394	ENSATEG00000024731	-	60	58.394	Anabas_testudineus
ENSCVAG00000019758	-	79	43.796	ENSACAG00000028706	-	54	43.796	Anolis_carolinensis
ENSCVAG00000019758	-	75	55.725	ENSIPUG00000017481	-	69	55.882	Ictalurus_punctatus
ENSCVAG00000019758	-	75	58.015	ENSIPUG00000018566	-	65	58.088	Ictalurus_punctatus
ENSCVAG00000019758	-	75	55.725	ENSIPUG00000017577	-	68	55.882	Ictalurus_punctatus
ENSCVAG00000019758	-	75	56.818	ENSIPUG00000001254	-	54	56.934	Ictalurus_punctatus
ENSCVAG00000019758	-	77	58.407	ENSIPUG00000004434	-	64	58.407	Ictalurus_punctatus
ENSCVAG00000019758	-	77	50.781	ENSKMAG00000007346	-	51	51.145	Kryptolebias_marmoratus
ENSCVAG00000019758	-	67	52.632	ENSLBEG00000020214	-	59	52.632	Labrus_bergylta
ENSCVAG00000019758	-	70	56.000	ENSMAMG00000016074	-	51	56.000	Mastacembelus_armatus
ENSCVAG00000019758	-	85	42.759	ENSMMOG00000010846	-	84	42.759	Mola_mola
ENSCVAG00000019758	-	79	56.934	ENSORLG00000024021	-	52	56.934	Oryzias_latipes
ENSCVAG00000019758	-	79	46.715	ENSORLG00020002943	-	62	46.715	Oryzias_latipes_hni
ENSCVAG00000019758	-	77	59.259	ENSORLG00015022051	-	51	59.124	Oryzias_latipes_hsok
ENSCVAG00000019758	-	77	50.000	ENSPFOG00000024325	-	53	50.365	Poecilia_formosa
ENSCVAG00000019758	-	68	57.732	ENSPNAG00000027454	-	60	57.732	Pygocentrus_nattereri
ENSCVAG00000019758	-	79	60.584	ENSTRUG00000020404	-	55	60.584	Takifugu_rubripes