EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000019759 (Gene tree)
Gene ID: 107085731
Gene Symbol: polr1e
Alias: zgc:112501
Full Name: RNA polymerase I subunit E
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 7972 bases
Position: chrKL652631.1:449895-457866
Accession: 107085731
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000030904	RNA_pol_I_A49	PF06870.12	5.3e-111	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000032036	-	2321	XM_015376245	ENSCVAP00000030904	415 (aa)	XP_015231731	UPI0007425BA6

Gene Model

Click here to download ENSCVAG00000019759's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000019759's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000019759	polr1e	97	42.752	ENSG00000137054	POLR1E	96	42.752	Homo_sapiens
ENSCVAG00000019759	polr1e	100	68.029	ENSAPOG00000012452	polr1e	100	68.029	Acanthochromis_polyacanthus
ENSCVAG00000019759	polr1e	98	38.326	ENSAMEG00000010193	POLR1E	94	38.326	Ailuropoda_melanoleuca
ENSCVAG00000019759	polr1e	100	66.507	ENSACIG00000009884	polr1e	99	72.449	Amphilophus_citrinellus
ENSCVAG00000019759	polr1e	100	74.279	ENSAOCG00000005665	polr1e	100	74.279	Amphiprion_ocellaris
ENSCVAG00000019759	polr1e	100	74.760	ENSAPEG00000020581	polr1e	100	74.760	Amphiprion_percula
ENSCVAG00000019759	polr1e	100	76.923	ENSATEG00000020609	polr1e	100	76.923	Anabas_testudineus
ENSCVAG00000019759	polr1e	81	39.062	ENSAPLG00000010340	POLR1E	100	39.175	Anas_platyrhynchos
ENSCVAG00000019759	polr1e	99	42.308	ENSANAG00000038046	POLR1E	98	42.308	Aotus_nancymaae
ENSCVAG00000019759	polr1e	100	76.442	ENSACLG00000013685	polr1e	99	76.442	Astatotilapia_calliptera
ENSCVAG00000019759	polr1e	99	56.039	ENSAMXG00000018181	polr1e	99	56.039	Astyanax_mexicanus
ENSCVAG00000019759	polr1e	98	44.390	ENSBTAG00000012243	POLR1E	97	44.390	Bos_taurus
ENSCVAG00000019759	polr1e	94	41.013	ENSCJAG00000010512	POLR1E	92	43.750	Callithrix_jacchus
ENSCVAG00000019759	polr1e	99	42.029	ENSCAFG00000002377	POLR1E	98	42.029	Canis_familiaris
ENSCVAG00000019759	polr1e	99	41.787	ENSCAFG00020017851	POLR1E	98	41.787	Canis_lupus_dingo
ENSCVAG00000019759	polr1e	98	44.390	ENSCHIG00000019479	POLR1E	97	44.390	Capra_hircus
ENSCVAG00000019759	polr1e	99	42.271	ENSTSYG00000002075	POLR1E	98	42.271	Carlito_syrichta
ENSCVAG00000019759	polr1e	70	41.237	ENSCAPG00000015653	POLR1E	99	41.237	Cavia_aperea
ENSCVAG00000019759	polr1e	98	42.892	ENSCPOG00000009965	POLR1E	97	42.892	Cavia_porcellus
ENSCVAG00000019759	polr1e	99	38.164	ENSCCAG00000029460	POLR1E	98	37.923	Cebus_capucinus
ENSCVAG00000019759	polr1e	97	42.752	ENSCATG00000031732	POLR1E	95	48.077	Cercocebus_atys
ENSCVAG00000019759	polr1e	87	44.475	ENSCLAG00000012701	POLR1E	95	44.475	Chinchilla_lanigera
ENSCVAG00000019759	polr1e	97	42.752	ENSCSAG00000010782	POLR1E	96	42.752	Chlorocebus_sabaeus
ENSCVAG00000019759	polr1e	95	37.121	ENSCHOG00000013024	POLR1E	82	37.121	Choloepus_hoffmanni
ENSCVAG00000019759	polr1e	99	43.943	ENSCPBG00000006923	POLR1E	99	44.391	Chrysemys_picta_bellii
ENSCVAG00000019759	polr1e	97	43.243	ENSCANG00000036112	POLR1E	95	50.000	Colobus_angolensis_palliatus
ENSCVAG00000019759	polr1e	99	40.482	ENSCGRG00001006197	Polr1e	95	40.625	Cricetulus_griseus_chok1gshd
ENSCVAG00000019759	polr1e	99	40.000	ENSCGRG00000006430	Polr1e	95	40.000	Cricetulus_griseus_crigri
ENSCVAG00000019759	polr1e	99	68.116	ENSCSEG00000005121	polr1e	99	68.116	Cynoglossus_semilaevis
ENSCVAG00000019759	polr1e	97	56.576	ENSDARG00000006434	polr1e	100	56.386	Danio_rerio
ENSCVAG00000019759	polr1e	99	37.365	ENSDNOG00000010257	POLR1E	98	34.979	Dasypus_novemcinctus
ENSCVAG00000019759	polr1e	85	42.061	ENSETEG00000018204	POLR1E	99	42.061	Echinops_telfairi
ENSCVAG00000019759	polr1e	99	42.548	ENSEASG00005000675	POLR1E	98	42.548	Equus_asinus_asinus
ENSCVAG00000019759	polr1e	99	42.548	ENSECAG00000014669	POLR1E	98	42.548	Equus_caballus
ENSCVAG00000019759	polr1e	94	38.734	ENSEEUG00000011928	POLR1E	83	38.734	Erinaceus_europaeus
ENSCVAG00000019759	polr1e	99	66.184	ENSELUG00000008150	polr1e	99	66.184	Esox_lucius
ENSCVAG00000019759	polr1e	99	42.206	ENSFCAG00000013081	POLR1E	98	42.206	Felis_catus
ENSCVAG00000019759	polr1e	95	43.467	ENSFALG00000012950	POLR1E	99	43.467	Ficedula_albicollis
ENSCVAG00000019759	polr1e	98	44.853	ENSFDAG00000016917	POLR1E	97	44.853	Fukomys_damarensis
ENSCVAG00000019759	polr1e	100	83.894	ENSFHEG00000009801	polr1e	100	83.894	Fundulus_heteroclitus
ENSCVAG00000019759	polr1e	99	53.222	ENSGMOG00000003336	POLR1E	99	53.222	Gadus_morhua
ENSCVAG00000019759	polr1e	98	44.769	ENSGALG00000005395	POLR1E	98	44.769	Gallus_gallus
ENSCVAG00000019759	polr1e	100	82.892	ENSGAFG00000004850	polr1e	100	82.892	Gambusia_affinis
ENSCVAG00000019759	polr1e	100	67.780	ENSGACG00000016087	polr1e	100	67.780	Gasterosteus_aculeatus
ENSCVAG00000019759	polr1e	97	40.741	ENSGAGG00000001659	POLR1E	99	40.482	Gopherus_agassizii
ENSCVAG00000019759	polr1e	99	42.308	ENSGGOG00000001882	POLR1E	98	46.018	Gorilla_gorilla
ENSCVAG00000019759	polr1e	100	76.683	ENSHBUG00000002559	polr1e	99	76.683	Haplochromis_burtoni
ENSCVAG00000019759	polr1e	98	44.363	ENSHGLG00000002036	POLR1E	97	44.363	Heterocephalus_glaber_female
ENSCVAG00000019759	polr1e	98	44.608	ENSHGLG00100012784	POLR1E	97	44.608	Heterocephalus_glaber_male
ENSCVAG00000019759	polr1e	100	67.711	ENSHCOG00000002774	polr1e	100	67.952	Hippocampus_comes
ENSCVAG00000019759	polr1e	99	53.735	ENSIPUG00000003019	polr1e	99	53.735	Ictalurus_punctatus
ENSCVAG00000019759	polr1e	99	42.029	ENSSTOG00000009810	POLR1E	99	42.029	Ictidomys_tridecemlineatus
ENSCVAG00000019759	polr1e	98	42.647	ENSJJAG00000020731	Polr1e	93	42.647	Jaculus_jaculus
ENSCVAG00000019759	polr1e	100	79.808	ENSKMAG00000000046	polr1e	100	79.808	Kryptolebias_marmoratus
ENSCVAG00000019759	polr1e	99	74.940	ENSLBEG00000003104	polr1e	99	74.940	Labrus_bergylta
ENSCVAG00000019759	polr1e	86	49.727	ENSLACG00000003416	POLR1E	99	49.727	Latimeria_chalumnae
ENSCVAG00000019759	polr1e	99	52.029	ENSLOCG00000012859	polr1e	99	52.029	Lepisosteus_oculatus
ENSCVAG00000019759	polr1e	99	42.754	ENSLAFG00000012831	POLR1E	98	42.754	Loxodonta_africana
ENSCVAG00000019759	polr1e	97	42.752	ENSMFAG00000045465	POLR1E	95	48.077	Macaca_fascicularis
ENSCVAG00000019759	polr1e	97	42.752	ENSMMUG00000017892	POLR1E	95	48.077	Macaca_mulatta
ENSCVAG00000019759	polr1e	97	38.995	ENSMNEG00000040283	POLR1E	96	38.995	Macaca_nemestrina
ENSCVAG00000019759	polr1e	97	42.752	ENSMLEG00000031135	POLR1E	95	48.077	Mandrillus_leucophaeus
ENSCVAG00000019759	polr1e	99	75.904	ENSMAMG00000001260	polr1e	99	75.904	Mastacembelus_armatus
ENSCVAG00000019759	polr1e	100	76.442	ENSMZEG00005021536	polr1e	99	76.442	Maylandia_zebra
ENSCVAG00000019759	polr1e	98	41.422	ENSMAUG00000021044	Polr1e	93	41.422	Mesocricetus_auratus
ENSCVAG00000019759	polr1e	99	42.548	ENSMICG00000003673	POLR1E	98	42.548	Microcebus_murinus
ENSCVAG00000019759	polr1e	98	39.903	ENSMOCG00000012920	Polr1e	94	39.903	Microtus_ochrogaster
ENSCVAG00000019759	polr1e	100	72.422	ENSMMOG00000007391	polr1e	100	72.422	Mola_mola
ENSCVAG00000019759	polr1e	96	43.564	ENSMODG00000002884	POLR1E	98	43.812	Monodelphis_domestica
ENSCVAG00000019759	polr1e	100	76.442	ENSMALG00000002665	polr1e	99	76.442	Monopterus_albus
ENSCVAG00000019759	polr1e	99	41.063	MGP_CAROLIEiJ_G0025967	Polr1e	97	41.414	Mus_caroli
ENSCVAG00000019759	polr1e	99	40.964	ENSMUSG00000028318	Polr1e	97	41.310	Mus_musculus
ENSCVAG00000019759	polr1e	99	42.410	MGP_PahariEiJ_G0024114	Polr1e	97	42.821	Mus_pahari
ENSCVAG00000019759	polr1e	99	41.205	MGP_SPRETEiJ_G0026930	Polr1e	97	41.562	Mus_spretus
ENSCVAG00000019759	polr1e	99	37.931	ENSMPUG00000006040	POLR1E	98	35.484	Mustela_putorius_furo
ENSCVAG00000019759	polr1e	99	43.510	ENSMLUG00000012688	POLR1E	95	43.510	Myotis_lucifugus
ENSCVAG00000019759	polr1e	98	42.647	ENSNGAG00000002520	Polr1e	93	42.647	Nannospalax_galili
ENSCVAG00000019759	polr1e	100	76.923	ENSNBRG00000016822	polr1e	99	76.923	Neolamprologus_brichardi
ENSCVAG00000019759	polr1e	97	42.752	ENSNLEG00000003616	POLR1E	95	48.077	Nomascus_leucogenys
ENSCVAG00000019759	polr1e	73	48.000	ENSMEUG00000015372	-	80	48.000	Notamacropus_eugenii
ENSCVAG00000019759	polr1e	86	37.778	ENSOPRG00000014206	POLR1E	99	37.778	Ochotona_princeps
ENSCVAG00000019759	polr1e	98	44.118	ENSODEG00000014565	POLR1E	94	44.118	Octodon_degus
ENSCVAG00000019759	polr1e	100	76.683	ENSONIG00000008921	polr1e	99	76.683	Oreochromis_niloticus
ENSCVAG00000019759	polr1e	99	41.787	ENSOCUG00000024773	POLR1E	98	41.787	Oryctolagus_cuniculus
ENSCVAG00000019759	polr1e	100	71.875	ENSORLG00000005143	polr1e	100	71.875	Oryzias_latipes
ENSCVAG00000019759	polr1e	93	68.992	ENSORLG00020007271	polr1e	99	68.992	Oryzias_latipes_hni
ENSCVAG00000019759	polr1e	100	71.875	ENSORLG00015000137	polr1e	100	71.875	Oryzias_latipes_hsok
ENSCVAG00000019759	polr1e	100	70.673	ENSOMEG00000013264	polr1e	98	70.673	Oryzias_melastigma
ENSCVAG00000019759	polr1e	99	42.410	ENSOGAG00000012981	POLR1E	96	42.410	Otolemur_garnettii
ENSCVAG00000019759	polr1e	98	44.634	ENSOARG00000011465	POLR1E	93	44.634	Ovis_aries
ENSCVAG00000019759	polr1e	97	42.752	ENSPPAG00000034566	POLR1E	95	48.077	Pan_paniscus
ENSCVAG00000019759	polr1e	99	42.206	ENSPPRG00000005649	POLR1E	98	42.206	Panthera_pardus
ENSCVAG00000019759	polr1e	99	42.206	ENSPTIG00000009774	POLR1E	98	42.206	Panthera_tigris_altaica
ENSCVAG00000019759	polr1e	97	42.752	ENSPTRG00000020944	POLR1E	95	48.077	Pan_troglodytes
ENSCVAG00000019759	polr1e	97	42.752	ENSPANG00000025563	POLR1E	95	48.077	Papio_anubis
ENSCVAG00000019759	polr1e	99	57.995	ENSPKIG00000003562	polr1e	99	57.995	Paramormyrops_kingsleyae
ENSCVAG00000019759	polr1e	98	41.809	ENSPSIG00000003274	POLR1E	95	42.543	Pelodiscus_sinensis
ENSCVAG00000019759	polr1e	95	64.987	ENSPMGG00000024169	polr1e	95	64.987	Periophthalmus_magnuspinnatus
ENSCVAG00000019759	polr1e	99	40.821	ENSPEMG00000019151	-	95	40.821	Peromyscus_maniculatus_bairdii
ENSCVAG00000019759	polr1e	99	35.280	ENSPEMG00000022300	-	94	35.280	Peromyscus_maniculatus_bairdii
ENSCVAG00000019759	polr1e	96	44.776	ENSPCIG00000014798	POLR1E	98	44.776	Phascolarctos_cinereus
ENSCVAG00000019759	polr1e	100	78.685	ENSPFOG00000019627	polr1e	99	78.685	Poecilia_formosa
ENSCVAG00000019759	polr1e	100	83.373	ENSPLAG00000022679	polr1e	100	83.373	Poecilia_latipinna
ENSCVAG00000019759	polr1e	87	84.680	ENSPMEG00000022123	polr1e	93	84.680	Poecilia_mexicana
ENSCVAG00000019759	polr1e	100	82.410	ENSPREG00000009470	polr1e	100	82.410	Poecilia_reticulata
ENSCVAG00000019759	polr1e	97	42.998	ENSPPYG00000019061	POLR1E	96	42.998	Pongo_abelii
ENSCVAG00000019759	polr1e	50	38.835	ENSPCAG00000004891	POLR1E	67	38.835	Procavia_capensis
ENSCVAG00000019759	polr1e	98	42.373	ENSPCOG00000027448	POLR1E	98	42.373	Propithecus_coquereli
ENSCVAG00000019759	polr1e	95	42.172	ENSPVAG00000007940	POLR1E	83	42.172	Pteropus_vampyrus
ENSCVAG00000019759	polr1e	100	76.683	ENSPNYG00000001032	polr1e	99	76.683	Pundamilia_nyererei
ENSCVAG00000019759	polr1e	99	56.145	ENSPNAG00000006987	polr1e	99	56.145	Pygocentrus_nattereri
ENSCVAG00000019759	polr1e	98	40.976	ENSRNOG00000012664	Polr1e	93	40.976	Rattus_norvegicus
ENSCVAG00000019759	polr1e	94	43.038	ENSRBIG00000034214	POLR1E	99	43.684	Rhinopithecus_bieti
ENSCVAG00000019759	polr1e	97	42.752	ENSRROG00000031986	POLR1E	95	48.077	Rhinopithecus_roxellana
ENSCVAG00000019759	polr1e	97	42.787	ENSSBOG00000021415	POLR1E	96	42.787	Saimiri_boliviensis_boliviensis
ENSCVAG00000019759	polr1e	82	43.804	ENSSHAG00000016084	POLR1E	95	43.804	Sarcophilus_harrisii
ENSCVAG00000019759	polr1e	99	58.513	ENSSFOG00015002293	polr1e	99	58.513	Scleropages_formosus
ENSCVAG00000019759	polr1e	99	75.604	ENSSMAG00000011672	polr1e	93	75.604	Scophthalmus_maximus
ENSCVAG00000019759	polr1e	100	75.240	ENSSDUG00000022279	polr1e	99	75.240	Seriola_dumerili
ENSCVAG00000019759	polr1e	100	75.481	ENSSLDG00000024918	polr1e	99	75.481	Seriola_lalandi_dorsalis
ENSCVAG00000019759	polr1e	56	38.362	ENSSARG00000009810	-	58	38.362	Sorex_araneus
ENSCVAG00000019759	polr1e	100	42.891	ENSSPUG00000009499	POLR1E	100	42.891	Sphenodon_punctatus
ENSCVAG00000019759	polr1e	100	77.349	ENSSPAG00000021240	polr1e	100	77.349	Stegastes_partitus
ENSCVAG00000019759	polr1e	99	42.271	ENSSSCG00000005347	POLR1E	98	42.271	Sus_scrofa
ENSCVAG00000019759	polr1e	95	38.341	ENSTGUG00000007169	POLR1E	100	38.341	Taeniopygia_guttata
ENSCVAG00000019759	polr1e	99	68.900	ENSTRUG00000020779	polr1e	99	69.211	Takifugu_rubripes
ENSCVAG00000019759	polr1e	99	70.433	ENSTNIG00000017812	polr1e	99	70.433	Tetraodon_nigroviridis
ENSCVAG00000019759	polr1e	95	42.929	ENSTBEG00000013786	POLR1E	84	42.929	Tupaia_belangeri
ENSCVAG00000019759	polr1e	95	42.356	ENSTTRG00000008294	POLR1E	84	42.356	Tursiops_truncatus
ENSCVAG00000019759	polr1e	99	42.271	ENSUAMG00000012474	POLR1E	98	44.011	Ursus_americanus
ENSCVAG00000019759	polr1e	99	42.271	ENSUMAG00000011496	POLR1E	98	42.271	Ursus_maritimus
ENSCVAG00000019759	polr1e	81	39.883	ENSVPAG00000009048	POLR1E	81	39.883	Vicugna_pacos
ENSCVAG00000019759	polr1e	98	42.157	ENSVVUG00000019954	POLR1E	97	42.157	Vulpes_vulpes
ENSCVAG00000019759	polr1e	99	40.476	ENSXETG00000006533	polr1e	99	40.476	Xenopus_tropicalis
ENSCVAG00000019759	polr1e	100	79.759	ENSXCOG00000013706	polr1e	100	79.759	Xiphophorus_couchianus
ENSCVAG00000019759	polr1e	100	84.819	ENSXMAG00000012484	polr1e	100	84.819	Xiphophorus_maculatus