EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000019770 (Gene tree)
Gene ID: 107082333
Gene Symbol: trnt1
Alias: zgc:86645
Full Name: tRNA nucleotidyl transferase 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 14498 bases
Position: chrKL652551.1:1619295-1633792
Accession: 107082333
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000030902	PolyA_pol	PF01743.20	5.1e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000025243	-	1463	XM_015370951	ENSCVAP00000030902	425 (aa)	XP_015226437	UPI000742574F

Gene Model

Click here to download ENSCVAG00000019770's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000019770's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000019770	trnt1	99	67.849	ENSG00000072756	TRNT1	96	67.849	Homo_sapiens
ENSCVAG00000019770	trnt1	100	83.607	ENSAPOG00000013687	trnt1	100	83.607	Acanthochromis_polyacanthus
ENSCVAG00000019770	trnt1	97	67.788	ENSAMEG00000014520	TRNT1	95	67.788	Ailuropoda_melanoleuca
ENSCVAG00000019770	trnt1	100	88.028	ENSACIG00000021706	trnt1	100	88.028	Amphilophus_citrinellus
ENSCVAG00000019770	trnt1	100	86.417	ENSAOCG00000024612	trnt1	100	86.417	Amphiprion_ocellaris
ENSCVAG00000019770	trnt1	96	79.126	ENSAPEG00000022627	trnt1	95	79.126	Amphiprion_percula
ENSCVAG00000019770	trnt1	95	88.089	ENSATEG00000008928	trnt1	99	88.089	Anabas_testudineus
ENSCVAG00000019770	trnt1	90	68.668	ENSAPLG00000004258	TRNT1	95	68.668	Anas_platyrhynchos
ENSCVAG00000019770	trnt1	96	66.748	ENSACAG00000005657	TRNT1	93	66.748	Anolis_carolinensis
ENSCVAG00000019770	trnt1	96	69.458	ENSANAG00000024802	TRNT1	94	69.458	Aotus_nancymaae
ENSCVAG00000019770	trnt1	99	86.385	ENSACLG00000022227	trnt1	99	86.385	Astatotilapia_calliptera
ENSCVAG00000019770	trnt1	96	78.589	ENSAMXG00000003960	trnt1	95	78.589	Astyanax_mexicanus
ENSCVAG00000019770	trnt1	96	67.813	ENSBTAG00000019534	TRNT1	94	67.813	Bos_taurus
ENSCVAG00000019770	trnt1	95	42.651	WBGene00010089	hpo-31	94	42.651	Caenorhabditis_elegans
ENSCVAG00000019770	trnt1	96	69.704	ENSCJAG00000015466	TRNT1	94	69.704	Callithrix_jacchus
ENSCVAG00000019770	trnt1	96	69.212	ENSCAFG00000005985	TRNT1	93	69.212	Canis_familiaris
ENSCVAG00000019770	trnt1	96	69.212	ENSCAFG00020014746	TRNT1	93	69.212	Canis_lupus_dingo
ENSCVAG00000019770	trnt1	96	68.059	ENSCHIG00000007030	TRNT1	93	68.059	Capra_hircus
ENSCVAG00000019770	trnt1	96	70.443	ENSTSYG00000013390	TRNT1	94	70.443	Carlito_syrichta
ENSCVAG00000019770	trnt1	89	54.642	ENSCAPG00000006891	TRNT1	99	54.642	Cavia_aperea
ENSCVAG00000019770	trnt1	97	68.116	ENSCPOG00000007849	TRNT1	95	68.116	Cavia_porcellus
ENSCVAG00000019770	trnt1	96	68.537	ENSCCAG00000002919	TRNT1	99	68.537	Cebus_capucinus
ENSCVAG00000019770	trnt1	96	70.197	ENSCATG00000031985	TRNT1	92	70.197	Cercocebus_atys
ENSCVAG00000019770	trnt1	96	68.873	ENSCLAG00000005186	TRNT1	84	79.888	Chinchilla_lanigera
ENSCVAG00000019770	trnt1	96	70.197	ENSCSAG00000011052	TRNT1	94	70.197	Chlorocebus_sabaeus
ENSCVAG00000019770	trnt1	80	78.977	ENSCHOG00000005712	TRNT1	78	78.977	Choloepus_hoffmanni
ENSCVAG00000019770	trnt1	96	70.098	ENSCPBG00000017636	TRNT1	93	70.098	Chrysemys_picta_bellii
ENSCVAG00000019770	trnt1	95	40.247	ENSCING00000007069	-	99	40.247	Ciona_intestinalis
ENSCVAG00000019770	trnt1	95	40.842	ENSCSAVG00000007494	-	95	40.842	Ciona_savignyi
ENSCVAG00000019770	trnt1	96	70.443	ENSCANG00000039030	TRNT1	94	70.443	Colobus_angolensis_palliatus
ENSCVAG00000019770	trnt1	96	69.608	ENSCGRG00001009998	Trnt1	94	69.608	Cricetulus_griseus_chok1gshd
ENSCVAG00000019770	trnt1	96	69.608	ENSCGRG00000013410	Trnt1	86	79.121	Cricetulus_griseus_crigri
ENSCVAG00000019770	trnt1	99	81.647	ENSCSEG00000008157	trnt1	99	81.647	Cynoglossus_semilaevis
ENSCVAG00000019770	trnt1	95	80.494	ENSDARG00000075297	trnt1	94	80.494	Danio_rerio
ENSCVAG00000019770	trnt1	96	70.098	ENSDNOG00000008837	TRNT1	94	70.098	Dasypus_novemcinctus
ENSCVAG00000019770	trnt1	96	69.853	ENSDORG00000014035	Trnt1	94	69.853	Dipodomys_ordii
ENSCVAG00000019770	trnt1	94	49.010	FBgn0037369	CG2100	83	49.010	Drosophila_melanogaster
ENSCVAG00000019770	trnt1	57	73.859	ENSETEG00000018177	TRNT1	97	73.859	Echinops_telfairi
ENSCVAG00000019770	trnt1	99	61.229	ENSEBUG00000012779	-	99	61.229	Eptatretus_burgeri
ENSCVAG00000019770	trnt1	96	70.197	ENSEASG00005003577	TRNT1	94	70.197	Equus_asinus_asinus
ENSCVAG00000019770	trnt1	96	70.443	ENSECAG00000014420	TRNT1	94	70.443	Equus_caballus
ENSCVAG00000019770	trnt1	99	68.310	ENSEEUG00000009567	TRNT1	97	68.310	Erinaceus_europaeus
ENSCVAG00000019770	trnt1	99	79.391	ENSELUG00000003802	trnt1	99	79.391	Esox_lucius
ENSCVAG00000019770	trnt1	97	68.116	ENSFCAG00000026805	TRNT1	95	68.116	Felis_catus
ENSCVAG00000019770	trnt1	90	68.930	ENSFALG00000013539	TRNT1	99	68.930	Ficedula_albicollis
ENSCVAG00000019770	trnt1	96	68.227	ENSFDAG00000018412	TRNT1	94	68.227	Fukomys_damarensis
ENSCVAG00000019770	trnt1	100	89.647	ENSFHEG00000019294	trnt1	100	89.647	Fundulus_heteroclitus
ENSCVAG00000019770	trnt1	99	78.404	ENSGMOG00000007460	trnt1	100	78.404	Gadus_morhua
ENSCVAG00000019770	trnt1	99	65.952	ENSGALG00000017368	TRNT1	97	65.952	Gallus_gallus
ENSCVAG00000019770	trnt1	99	87.736	ENSGAFG00000008647	trnt1	99	87.736	Gambusia_affinis
ENSCVAG00000019770	trnt1	99	83.099	ENSGACG00000011903	trnt1	96	86.387	Gasterosteus_aculeatus
ENSCVAG00000019770	trnt1	98	69.952	ENSGAGG00000020942	TRNT1	95	69.952	Gopherus_agassizii
ENSCVAG00000019770	trnt1	96	69.951	ENSGGOG00000015286	TRNT1	94	69.951	Gorilla_gorilla
ENSCVAG00000019770	trnt1	99	86.620	ENSHBUG00000002797	trnt1	99	86.620	Haplochromis_burtoni
ENSCVAG00000019770	trnt1	96	63.636	ENSHGLG00000000221	-	94	63.636	Heterocephalus_glaber_female
ENSCVAG00000019770	trnt1	96	68.627	ENSHGLG00000003649	TRNT1	94	68.627	Heterocephalus_glaber_female
ENSCVAG00000019770	trnt1	96	67.402	ENSHGLG00100016421	TRNT1	94	67.402	Heterocephalus_glaber_male
ENSCVAG00000019770	trnt1	100	77.752	ENSHCOG00000010618	trnt1	100	77.752	Hippocampus_comes
ENSCVAG00000019770	trnt1	97	79.036	ENSIPUG00000000971	trnt1	96	79.036	Ictalurus_punctatus
ENSCVAG00000019770	trnt1	96	70.098	ENSSTOG00000000150	TRNT1	86	79.888	Ictidomys_tridecemlineatus
ENSCVAG00000019770	trnt1	96	69.118	ENSJJAG00000018561	Trnt1	94	69.118	Jaculus_jaculus
ENSCVAG00000019770	trnt1	99	86.118	ENSKMAG00000011307	trnt1	99	86.118	Kryptolebias_marmoratus
ENSCVAG00000019770	trnt1	96	77.129	ENSLBEG00000019457	trnt1	97	77.129	Labrus_bergylta
ENSCVAG00000019770	trnt1	96	71.007	ENSLACG00000013227	TRNT1	94	71.007	Latimeria_chalumnae
ENSCVAG00000019770	trnt1	99	73.193	ENSLOCG00000011105	trnt1	98	73.193	Lepisosteus_oculatus
ENSCVAG00000019770	trnt1	96	69.951	ENSLAFG00000023191	TRNT1	94	69.951	Loxodonta_africana
ENSCVAG00000019770	trnt1	96	70.197	ENSMFAG00000045113	TRNT1	92	70.197	Macaca_fascicularis
ENSCVAG00000019770	trnt1	96	70.197	ENSMMUG00000017983	TRNT1	92	70.197	Macaca_mulatta
ENSCVAG00000019770	trnt1	96	70.197	ENSMNEG00000037805	TRNT1	92	70.197	Macaca_nemestrina
ENSCVAG00000019770	trnt1	90	70.681	ENSMLEG00000033671	TRNT1	99	70.681	Mandrillus_leucophaeus
ENSCVAG00000019770	trnt1	100	84.543	ENSMAMG00000023401	trnt1	100	84.543	Mastacembelus_armatus
ENSCVAG00000019770	trnt1	99	86.385	ENSMZEG00005009141	trnt1	99	86.385	Maylandia_zebra
ENSCVAG00000019770	trnt1	75	66.144	ENSMGAG00000009971	TRNT1	99	66.144	Meleagris_gallopavo
ENSCVAG00000019770	trnt1	96	69.363	ENSMAUG00000020707	Trnt1	94	69.363	Mesocricetus_auratus
ENSCVAG00000019770	trnt1	97	69.082	ENSMICG00000016615	TRNT1	95	69.082	Microcebus_murinus
ENSCVAG00000019770	trnt1	96	69.118	ENSMOCG00000004539	Trnt1	94	69.118	Microtus_ochrogaster
ENSCVAG00000019770	trnt1	99	83.491	ENSMMOG00000010742	trnt1	99	83.491	Mola_mola
ENSCVAG00000019770	trnt1	99	66.114	ENSMODG00000004368	TRNT1	97	66.114	Monodelphis_domestica
ENSCVAG00000019770	trnt1	100	82.201	ENSMALG00000008376	trnt1	99	82.201	Monopterus_albus
ENSCVAG00000019770	trnt1	96	69.363	MGP_CAROLIEiJ_G0028698	Trnt1	90	75.410	Mus_caroli
ENSCVAG00000019770	trnt1	96	69.118	ENSMUSG00000013736	Trnt1	83	80.447	Mus_musculus
ENSCVAG00000019770	trnt1	96	70.588	MGP_PahariEiJ_G0022449	Trnt1	88	81.564	Mus_pahari
ENSCVAG00000019770	trnt1	96	69.363	MGP_SPRETEiJ_G0029726	Trnt1	83	80.447	Mus_spretus
ENSCVAG00000019770	trnt1	97	68.841	ENSMPUG00000017017	TRNT1	95	68.841	Mustela_putorius_furo
ENSCVAG00000019770	trnt1	90	70.573	ENSMLUG00000011864	TRNT1	99	70.573	Myotis_lucifugus
ENSCVAG00000019770	trnt1	96	68.873	ENSNGAG00000000537	Trnt1	94	68.873	Nannospalax_galili
ENSCVAG00000019770	trnt1	81	85.838	ENSNBRG00000023606	trnt1	99	85.838	Neolamprologus_brichardi
ENSCVAG00000019770	trnt1	96	70.197	ENSNLEG00000003226	TRNT1	94	70.197	Nomascus_leucogenys
ENSCVAG00000019770	trnt1	99	65.877	ENSMEUG00000004684	TRNT1	97	65.877	Notamacropus_eugenii
ENSCVAG00000019770	trnt1	90	65.183	ENSOPRG00000015067	TRNT1	99	65.183	Ochotona_princeps
ENSCVAG00000019770	trnt1	96	68.966	ENSODEG00000007597	TRNT1	94	68.966	Octodon_degus
ENSCVAG00000019770	trnt1	100	87.354	ENSONIG00000020273	trnt1	99	87.354	Oreochromis_niloticus
ENSCVAG00000019770	trnt1	96	65.356	ENSOANG00000007514	TRNT1	94	65.356	Ornithorhynchus_anatinus
ENSCVAG00000019770	trnt1	96	67.980	ENSOCUG00000008580	TRNT1	94	67.980	Oryctolagus_cuniculus
ENSCVAG00000019770	trnt1	99	80.425	ENSORLG00000003165	trnt1	99	80.425	Oryzias_latipes
ENSCVAG00000019770	trnt1	99	80.896	ENSORLG00020022060	trnt1	99	80.896	Oryzias_latipes_hni
ENSCVAG00000019770	trnt1	99	80.896	ENSORLG00015018915	trnt1	99	80.896	Oryzias_latipes_hsok
ENSCVAG00000019770	trnt1	99	79.009	ENSOMEG00000003331	trnt1	99	79.009	Oryzias_melastigma
ENSCVAG00000019770	trnt1	96	68.059	ENSOARG00000008631	TRNT1	93	68.059	Ovis_aries
ENSCVAG00000019770	trnt1	96	69.704	ENSPPAG00000043566	TRNT1	94	69.704	Pan_paniscus
ENSCVAG00000019770	trnt1	97	67.874	ENSPPRG00000001327	TRNT1	95	67.874	Panthera_pardus
ENSCVAG00000019770	trnt1	97	67.874	ENSPTIG00000011448	TRNT1	95	67.874	Panthera_tigris_altaica
ENSCVAG00000019770	trnt1	96	69.704	ENSPTRG00000014564	TRNT1	94	69.704	Pan_troglodytes
ENSCVAG00000019770	trnt1	96	70.197	ENSPANG00000025944	TRNT1	92	70.197	Papio_anubis
ENSCVAG00000019770	trnt1	99	75.467	ENSPKIG00000020015	trnt1	99	75.467	Paramormyrops_kingsleyae
ENSCVAG00000019770	trnt1	93	69.620	ENSPSIG00000017356	TRNT1	99	70.752	Pelodiscus_sinensis
ENSCVAG00000019770	trnt1	99	79.812	ENSPMGG00000008888	trnt1	98	79.812	Periophthalmus_magnuspinnatus
ENSCVAG00000019770	trnt1	96	69.853	ENSPEMG00000019845	Trnt1	94	69.853	Peromyscus_maniculatus_bairdii
ENSCVAG00000019770	trnt1	99	66.588	ENSPCIG00000030436	TRNT1	97	66.588	Phascolarctos_cinereus
ENSCVAG00000019770	trnt1	99	88.333	ENSPFOG00000006194	trnt1	98	88.333	Poecilia_formosa
ENSCVAG00000019770	trnt1	99	88.571	ENSPLAG00000015623	trnt1	99	89.578	Poecilia_latipinna
ENSCVAG00000019770	trnt1	99	88.095	ENSPMEG00000012216	trnt1	99	89.330	Poecilia_mexicana
ENSCVAG00000019770	trnt1	99	87.500	ENSPREG00000021470	trnt1	99	87.500	Poecilia_reticulata
ENSCVAG00000019770	trnt1	96	69.363	ENSPPYG00000013702	TRNT1	94	69.363	Pongo_abelii
ENSCVAG00000019770	trnt1	90	70.942	ENSPCAG00000001951	TRNT1	99	70.942	Procavia_capensis
ENSCVAG00000019770	trnt1	96	69.704	ENSPCOG00000022228	TRNT1	94	69.704	Propithecus_coquereli
ENSCVAG00000019770	trnt1	90	69.372	ENSPVAG00000008784	TRNT1	99	69.372	Pteropus_vampyrus
ENSCVAG00000019770	trnt1	99	85.915	ENSPNYG00000003120	trnt1	99	85.915	Pundamilia_nyererei
ENSCVAG00000019770	trnt1	96	79.607	ENSPNAG00000000565	trnt1	94	79.607	Pygocentrus_nattereri
ENSCVAG00000019770	trnt1	96	70.343	ENSRNOG00000006432	Trnt1	94	70.343	Rattus_norvegicus
ENSCVAG00000019770	trnt1	96	69.212	ENSRBIG00000042632	TRNT1	93	69.212	Rhinopithecus_bieti
ENSCVAG00000019770	trnt1	96	70.197	ENSRROG00000036866	TRNT1	94	70.197	Rhinopithecus_roxellana
ENSCVAG00000019770	trnt1	96	69.704	ENSSBOG00000021208	TRNT1	94	69.704	Saimiri_boliviensis_boliviensis
ENSCVAG00000019770	trnt1	96	67.488	ENSSHAG00000018861	TRNT1	94	67.488	Sarcophilus_harrisii
ENSCVAG00000019770	trnt1	96	77.206	ENSSFOG00015020844	trnt1	94	77.206	Scleropages_formosus
ENSCVAG00000019770	trnt1	100	83.841	ENSSMAG00000015432	trnt1	98	83.841	Scophthalmus_maximus
ENSCVAG00000019770	trnt1	99	85.211	ENSSDUG00000012320	trnt1	100	85.211	Seriola_dumerili
ENSCVAG00000019770	trnt1	99	84.977	ENSSLDG00000009325	trnt1	100	84.977	Seriola_lalandi_dorsalis
ENSCVAG00000019770	trnt1	57	83.817	ENSSLDG00000016463	-	91	84.100	Seriola_lalandi_dorsalis
ENSCVAG00000019770	trnt1	90	69.634	ENSSPUG00000014153	TRNT1	99	69.634	Sphenodon_punctatus
ENSCVAG00000019770	trnt1	100	85.246	ENSSPAG00000021005	trnt1	100	85.246	Stegastes_partitus
ENSCVAG00000019770	trnt1	96	68.537	ENSSSCG00000011529	TRNT1	94	68.537	Sus_scrofa
ENSCVAG00000019770	trnt1	95	68.564	ENSTGUG00000010192	TRNT1	99	68.564	Taeniopygia_guttata
ENSCVAG00000019770	trnt1	99	81.221	ENSTRUG00000001088	trnt1	99	81.221	Takifugu_rubripes
ENSCVAG00000019770	trnt1	99	81.690	ENSTNIG00000007363	trnt1	98	81.690	Tetraodon_nigroviridis
ENSCVAG00000019770	trnt1	57	63.071	ENSTBEG00000006367	TRNT1	80	63.071	Tupaia_belangeri
ENSCVAG00000019770	trnt1	96	67.813	ENSTTRG00000007803	TRNT1	94	67.813	Tursiops_truncatus
ENSCVAG00000019770	trnt1	97	68.357	ENSUAMG00000022574	TRNT1	95	68.357	Ursus_americanus
ENSCVAG00000019770	trnt1	97	68.116	ENSUMAG00000024092	TRNT1	95	68.116	Ursus_maritimus
ENSCVAG00000019770	trnt1	96	69.212	ENSVVUG00000012810	TRNT1	93	69.212	Vulpes_vulpes
ENSCVAG00000019770	trnt1	96	61.858	ENSXETG00000025091	trnt1	99	61.940	Xenopus_tropicalis
ENSCVAG00000019770	trnt1	99	87.736	ENSXCOG00000010150	trnt1	99	87.736	Xiphophorus_couchianus
ENSCVAG00000019770	trnt1	99	87.972	ENSXMAG00000002227	trnt1	99	87.972	Xiphophorus_maculatus