EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000019848 (Gene tree)
Gene ID: 107099788
Gene Symbol: srrt
Alias: CHUNP6881|ars2|zgc:92060
Full Name: serrate%2C RNA effector molecule
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 13619 bases
Position: chrKL653408.1:283381-296999
Accession: 107099788
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000016743	ARS2	PF04959.13	3.1e-88	1	1
ENSCVAP00000030890	ARS2	PF04959.13	3.3e-88	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000032028	-	2511	-	ENSCVAP00000016743	836 (aa)	-	-
ENSCVAT00000032037	-	3199	XM_015398049	ENSCVAP00000030890	876 (aa)	XP_015253535	UPI00074283D9

Gene Model

Click here to download ENSCVAG00000019848's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000019848's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000019848	srrt	90	55.514	ENSCVAG00000017344	-	94	57.197

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000019848	srrt	96	65.352	ENSG00000087087	SRRT	98	83.871	Homo_sapiens
ENSCVAG00000019848	srrt	95	89.192	ENSAPOG00000002304	srrt	95	90.380	Acanthochromis_polyacanthus
ENSCVAG00000019848	srrt	96	64.538	ENSAMEG00000014506	SRRT	95	63.967	Ailuropoda_melanoleuca
ENSCVAG00000019848	srrt	95	85.536	ENSACIG00000015795	srrt	92	92.178	Amphilophus_citrinellus
ENSCVAG00000019848	srrt	93	57.263	ENSAOCG00000009189	-	94	57.126	Amphiprion_ocellaris
ENSCVAG00000019848	srrt	95	90.476	ENSAOCG00000009693	srrt	95	90.476	Amphiprion_ocellaris
ENSCVAG00000019848	srrt	93	57.263	ENSAPEG00000020016	-	94	57.126	Amphiprion_percula
ENSCVAG00000019848	srrt	95	89.881	ENSAPEG00000003646	srrt	95	92.178	Amphiprion_percula
ENSCVAG00000019848	srrt	56	63.354	ENSATEG00000003652	-	85	66.094	Anabas_testudineus
ENSCVAG00000019848	srrt	95	87.589	ENSATEG00000014425	srrt	95	87.828	Anabas_testudineus
ENSCVAG00000019848	srrt	95	65.880	ENSACAG00000001014	SRRT	95	65.525	Anolis_carolinensis
ENSCVAG00000019848	srrt	96	65.000	ENSANAG00000031718	SRRT	95	64.817	Aotus_nancymaae
ENSCVAG00000019848	srrt	95	87.723	ENSACLG00000013156	srrt	92	88.677	Astatotilapia_calliptera
ENSCVAG00000019848	srrt	93	57.194	ENSACLG00000009423	-	94	56.738	Astatotilapia_calliptera
ENSCVAG00000019848	srrt	96	64.923	ENSBTAG00000001134	SRRT	95	64.839	Bos_taurus
ENSCVAG00000019848	srrt	63	45.910	WBGene00017085	E01A2.2	88	42.418	Caenorhabditis_elegans
ENSCVAG00000019848	srrt	54	74.409	ENSCJAG00000014917	SRRT	95	64.463	Callithrix_jacchus
ENSCVAG00000019848	srrt	96	64.804	ENSCAFG00000023538	SRRT	95	65.316	Canis_familiaris
ENSCVAG00000019848	srrt	98	64.982	ENSCAFG00020013358	SRRT	99	62.271	Canis_lupus_dingo
ENSCVAG00000019848	srrt	98	63.329	ENSCHIG00000010495	SRRT	88	74.675	Capra_hircus
ENSCVAG00000019848	srrt	54	74.675	ENSTSYG00000036426	SRRT	99	63.095	Carlito_syrichta
ENSCVAG00000019848	srrt	54	75.604	ENSCAPG00000013586	SRRT	99	64.734	Cavia_aperea
ENSCVAG00000019848	srrt	96	64.608	ENSCPOG00000001739	SRRT	95	64.881	Cavia_porcellus
ENSCVAG00000019848	srrt	96	65.000	ENSCCAG00000015877	SRRT	95	64.699	Cebus_capucinus
ENSCVAG00000019848	srrt	96	64.881	ENSCATG00000036306	SRRT	97	63.668	Cercocebus_atys
ENSCVAG00000019848	srrt	96	64.804	ENSCLAG00000007568	SRRT	95	65.301	Chinchilla_lanigera
ENSCVAG00000019848	srrt	96	64.923	ENSCSAG00000017996	SRRT	95	64.623	Chlorocebus_sabaeus
ENSCVAG00000019848	srrt	56	69.132	ENSCHOG00000007815	SRRT	67	69.132	Choloepus_hoffmanni
ENSCVAG00000019848	srrt	72	74.123	ENSCPBG00000011553	SRRT	84	63.588	Chrysemys_picta_bellii
ENSCVAG00000019848	srrt	100	42.665	ENSCING00000003506	-	86	45.623	Ciona_intestinalis
ENSCVAG00000019848	srrt	100	42.984	ENSCSAVG00000008394	-	81	57.429	Ciona_savignyi
ENSCVAG00000019848	srrt	96	65.036	ENSCANG00000034556	SRRT	95	64.734	Colobus_angolensis_palliatus
ENSCVAG00000019848	srrt	96	64.624	ENSCGRG00001001594	Srrt	95	64.539	Cricetulus_griseus_chok1gshd
ENSCVAG00000019848	srrt	96	59.862	ENSCGRG00000007292	Srrt	99	65.291	Cricetulus_griseus_crigri
ENSCVAG00000019848	srrt	74	64.398	ENSCSEG00000005233	-	94	55.529	Cynoglossus_semilaevis
ENSCVAG00000019848	srrt	95	79.869	ENSCSEG00000017878	srrt	95	77.804	Cynoglossus_semilaevis
ENSCVAG00000019848	srrt	96	76.905	ENSDARG00000017762	srrt	95	77.556	Danio_rerio
ENSCVAG00000019848	srrt	54	74.624	ENSDNOG00000003851	SRRT	95	65.155	Dasypus_novemcinctus
ENSCVAG00000019848	srrt	54	75.271	ENSDORG00000005584	Srrt	99	65.720	Dipodomys_ordii
ENSCVAG00000019848	srrt	100	46.075	FBgn0033062	Ars2	69	53.205	Drosophila_melanogaster
ENSCVAG00000019848	srrt	77	71.882	ENSETEG00000016175	SRRT	81	71.429	Echinops_telfairi
ENSCVAG00000019848	srrt	77	53.610	ENSEBUG00000008517	-	80	62.256	Eptatretus_burgeri
ENSCVAG00000019848	srrt	96	64.804	ENSEASG00005016956	SRRT	95	64.235	Equus_asinus_asinus
ENSCVAG00000019848	srrt	96	64.804	ENSECAG00000012292	SRRT	95	64.353	Equus_caballus
ENSCVAG00000019848	srrt	81	77.083	ENSEEUG00000009117	SRRT	81	77.174	Erinaceus_europaeus
ENSCVAG00000019848	srrt	93	59.268	ENSELUG00000021216	-	53	68.803	Esox_lucius
ENSCVAG00000019848	srrt	96	74.253	ENSELUG00000006651	srrt	89	77.800	Esox_lucius
ENSCVAG00000019848	srrt	96	64.923	ENSFCAG00000006855	SRRT	95	64.252	Felis_catus
ENSCVAG00000019848	srrt	55	53.020	ENSFALG00000007524	-	77	69.091	Ficedula_albicollis
ENSCVAG00000019848	srrt	96	63.120	ENSFDAG00000021347	SRRT	95	63.879	Fukomys_damarensis
ENSCVAG00000019848	srrt	80	95.257	ENSFHEG00000002756	srrt	90	95.257	Fundulus_heteroclitus
ENSCVAG00000019848	srrt	56	57.231	ENSFHEG00000004105	-	93	57.203	Fundulus_heteroclitus
ENSCVAG00000019848	srrt	96	76.128	ENSGMOG00000018619	srrt	93	74.607	Gadus_morhua
ENSCVAG00000019848	srrt	66	66.216	ENSGMOG00000018694	-	78	65.766	Gadus_morhua
ENSCVAG00000019848	srrt	92	95.395	ENSGAFG00000005423	srrt	95	92.124	Gambusia_affinis
ENSCVAG00000019848	srrt	92	55.303	ENSGAFG00000020383	-	94	56.044	Gambusia_affinis
ENSCVAG00000019848	srrt	93	54.471	ENSGACG00000001100	-	94	55.357	Gasterosteus_aculeatus
ENSCVAG00000019848	srrt	96	84.770	ENSGACG00000020387	srrt	95	84.497	Gasterosteus_aculeatus
ENSCVAG00000019848	srrt	96	65.042	ENSGGOG00000001508	SRRT	96	64.734	Gorilla_gorilla
ENSCVAG00000019848	srrt	95	87.962	ENSHBUG00000002942	srrt	92	88.915	Haplochromis_burtoni
ENSCVAG00000019848	srrt	96	63.521	ENSHGLG00000008344	Srrt	89	70.664	Heterocephalus_glaber_female
ENSCVAG00000019848	srrt	96	64.005	ENSHGLG00100018857	Srrt	99	65.524	Heterocephalus_glaber_male
ENSCVAG00000019848	srrt	92	55.856	ENSHCOG00000008904	-	89	63.216	Hippocampus_comes
ENSCVAG00000019848	srrt	98	83.100	ENSHCOG00000005403	srrt	95	82.796	Hippocampus_comes
ENSCVAG00000019848	srrt	93	74.970	ENSIPUG00000021150	srrt	95	70.318	Ictalurus_punctatus
ENSCVAG00000019848	srrt	96	65.036	ENSSTOG00000013776	SRRT	95	64.497	Ictidomys_tridecemlineatus
ENSCVAG00000019848	srrt	96	64.527	ENSJJAG00000010446	Srrt	99	65.909	Jaculus_jaculus
ENSCVAG00000019848	srrt	55	64.509	ENSKMAG00000008468	-	94	56.465	Kryptolebias_marmoratus
ENSCVAG00000019848	srrt	95	86.595	ENSKMAG00000013599	srrt	95	87.189	Kryptolebias_marmoratus
ENSCVAG00000019848	srrt	58	64.626	ENSLBEG00000028983	-	97	52.044	Labrus_bergylta
ENSCVAG00000019848	srrt	98	84.154	ENSLBEG00000016308	srrt	95	83.990	Labrus_bergylta
ENSCVAG00000019848	srrt	95	56.426	ENSLACG00000001089	SRRT	95	56.280	Latimeria_chalumnae
ENSCVAG00000019848	srrt	81	83.861	ENSLOCG00000013658	srrt	96	84.810	Lepisosteus_oculatus
ENSCVAG00000019848	srrt	54	74.839	ENSLAFG00000007725	SRRT	95	64.657	Loxodonta_africana
ENSCVAG00000019848	srrt	96	65.036	ENSMFAG00000033745	SRRT	99	63.902	Macaca_fascicularis
ENSCVAG00000019848	srrt	96	64.923	ENSMMUG00000021255	SRRT	95	64.623	Macaca_mulatta
ENSCVAG00000019848	srrt	96	65.119	ENSMNEG00000041864	SRRT	97	63.902	Macaca_nemestrina
ENSCVAG00000019848	srrt	96	65.036	ENSMLEG00000029479	SRRT	98	63.902	Mandrillus_leucophaeus
ENSCVAG00000019848	srrt	92	90.132	ENSMAMG00000014311	srrt	95	88.067	Mastacembelus_armatus
ENSCVAG00000019848	srrt	93	56.865	ENSMAMG00000010681	-	94	57.882	Mastacembelus_armatus
ENSCVAG00000019848	srrt	93	57.314	ENSMZEG00005028002	-	94	57.092	Maylandia_zebra
ENSCVAG00000019848	srrt	95	87.843	ENSMZEG00005016135	srrt	92	88.796	Maylandia_zebra
ENSCVAG00000019848	srrt	54	74.194	ENSMAUG00000011386	Srrt	98	65.730	Mesocricetus_auratus
ENSCVAG00000019848	srrt	96	64.923	ENSMICG00000009471	SRRT	97	64.463	Microcebus_murinus
ENSCVAG00000019848	srrt	54	74.624	ENSMOCG00000001971	Srrt	89	71.828	Microtus_ochrogaster
ENSCVAG00000019848	srrt	95	83.499	ENSMMOG00000016399	srrt	95	82.818	Mola_mola
ENSCVAG00000019848	srrt	83	55.644	ENSMMOG00000011137	-	99	51.371	Mola_mola
ENSCVAG00000019848	srrt	54	70.726	ENSMODG00000004862	SRRT	99	66.290	Monodelphis_domestica
ENSCVAG00000019848	srrt	90	81.750	ENSMALG00000018604	srrt	99	78.897	Monopterus_albus
ENSCVAG00000019848	srrt	69	46.587	ENSMALG00000005567	-	100	47.260	Monopterus_albus
ENSCVAG00000019848	srrt	96	65.187	MGP_CAROLIEiJ_G0027870	Srrt	99	72.388	Mus_caroli
ENSCVAG00000019848	srrt	96	65.187	ENSMUSG00000037364	Srrt	99	72.388	Mus_musculus
ENSCVAG00000019848	srrt	54	76.044	MGP_PahariEiJ_G0024456	Srrt	99	72.388	Mus_pahari
ENSCVAG00000019848	srrt	96	65.187	MGP_SPRETEiJ_G0028875	Srrt	99	72.388	Mus_spretus
ENSCVAG00000019848	srrt	96	65.042	ENSMPUG00000015839	SRRT	95	64.252	Mustela_putorius_furo
ENSCVAG00000019848	srrt	96	64.923	ENSMLUG00000009975	SRRT	95	64.387	Myotis_lucifugus
ENSCVAG00000019848	srrt	96	64.377	ENSNGAG00000023715	Srrt	100	63.795	Nannospalax_galili
ENSCVAG00000019848	srrt	98	85.930	ENSNBRG00000019100	srrt	95	87.097	Neolamprologus_brichardi
ENSCVAG00000019848	srrt	95	58.596	ENSNLEG00000011987	SRRT	99	58.809	Nomascus_leucogenys
ENSCVAG00000019848	srrt	96	54.971	ENSMEUG00000011941	SRRT	94	54.970	Notamacropus_eugenii
ENSCVAG00000019848	srrt	64	72.727	ENSOPRG00000002502	-	67	74.242	Ochotona_princeps
ENSCVAG00000019848	srrt	54	75.824	ENSODEG00000016856	SRRT	89	71.645	Octodon_degus
ENSCVAG00000019848	srrt	93	57.414	ENSONIG00000016080	-	94	57.551	Oreochromis_niloticus
ENSCVAG00000019848	srrt	95	87.262	ENSONIG00000004242	srrt	95	85.267	Oreochromis_niloticus
ENSCVAG00000019848	srrt	98	85.448	ENSORLG00000008120	srrt	95	84.726	Oryzias_latipes
ENSCVAG00000019848	srrt	98	85.215	ENSORLG00020003058	srrt	95	84.487	Oryzias_latipes_hni
ENSCVAG00000019848	srrt	98	85.099	ENSORLG00015008062	srrt	95	84.368	Oryzias_latipes_hsok
ENSCVAG00000019848	srrt	98	86.030	ENSOMEG00000003155	srrt	92	89.831	Oryzias_melastigma
ENSCVAG00000019848	srrt	93	59.129	ENSOMEG00000006963	-	94	59.164	Oryzias_melastigma
ENSCVAG00000019848	srrt	96	64.923	ENSOGAG00000017242	SRRT	95	65.435	Otolemur_garnettii
ENSCVAG00000019848	srrt	96	64.678	ENSOARG00000015645	SRRT	95	64.713	Ovis_aries
ENSCVAG00000019848	srrt	96	65.233	ENSPPAG00000041090	SRRT	97	62.850	Pan_paniscus
ENSCVAG00000019848	srrt	96	64.916	ENSPPRG00000009557	SRRT	95	64.009	Panthera_pardus
ENSCVAG00000019848	srrt	96	64.804	ENSPTIG00000014355	SRRT	95	64.136	Panthera_tigris_altaica
ENSCVAG00000019848	srrt	96	65.233	ENSPTRG00000019511	SRRT	99	62.204	Pan_troglodytes
ENSCVAG00000019848	srrt	95	64.024	ENSPANG00000020763	SRRT	96	63.902	Papio_anubis
ENSCVAG00000019848	srrt	98	72.985	ENSPKIG00000005434	srrt	95	74.620	Paramormyrops_kingsleyae
ENSCVAG00000019848	srrt	94	71.119	ENSPKIG00000022212	-	95	70.700	Paramormyrops_kingsleyae
ENSCVAG00000019848	srrt	54	76.600	ENSPSIG00000016311	SRRT	95	65.047	Pelodiscus_sinensis
ENSCVAG00000019848	srrt	54	87.473	ENSPMGG00000002841	srrt	95	78.288	Periophthalmus_magnuspinnatus
ENSCVAG00000019848	srrt	54	76.044	ENSPEMG00000010834	Srrt	98	65.970	Peromyscus_maniculatus_bairdii
ENSCVAG00000019848	srrt	96	56.182	ENSPMAG00000009614	-	95	55.783	Petromyzon_marinus
ENSCVAG00000019848	srrt	96	63.669	ENSPCIG00000000816	SRRT	95	63.679	Phascolarctos_cinereus
ENSCVAG00000019848	srrt	92	56.051	ENSPFOG00000016554	-	94	56.501	Poecilia_formosa
ENSCVAG00000019848	srrt	95	92.491	ENSPFOG00000005704	srrt	95	92.491	Poecilia_formosa
ENSCVAG00000019848	srrt	95	90.212	ENSPLAG00000021992	srrt	95	89.387	Poecilia_latipinna
ENSCVAG00000019848	srrt	92	55.852	ENSPLAG00000004526	-	94	56.532	Poecilia_latipinna
ENSCVAG00000019848	srrt	95	92.014	ENSPMEG00000001182	srrt	95	91.418	Poecilia_mexicana
ENSCVAG00000019848	srrt	88	55.585	ENSPMEG00000001520	-	94	55.625	Poecilia_mexicana
ENSCVAG00000019848	srrt	95	92.133	ENSPREG00000022308	srrt	95	92.133	Poecilia_reticulata
ENSCVAG00000019848	srrt	96	55.383	ENSPPYG00000017432	SRRT	95	55.018	Pongo_abelii
ENSCVAG00000019848	srrt	54	72.727	ENSPCAG00000001621	SRRT	95	63.115	Procavia_capensis
ENSCVAG00000019848	srrt	96	64.713	ENSPCOG00000025751	SRRT	95	64.958	Propithecus_coquereli
ENSCVAG00000019848	srrt	77	56.535	ENSPVAG00000000834	SRRT	91	66.452	Pteropus_vampyrus
ENSCVAG00000019848	srrt	95	87.843	ENSPNYG00000018710	srrt	95	88.796	Pundamilia_nyererei
ENSCVAG00000019848	srrt	89	66.316	ENSPNAG00000010629	srrt	94	62.485	Pygocentrus_nattereri
ENSCVAG00000019848	srrt	54	65.721	ENSRNOG00000048277	AABR07035787.1	92	65.721	Rattus_norvegicus
ENSCVAG00000019848	srrt	96	64.923	ENSRBIG00000035718	SRRT	97	63.902	Rhinopithecus_bieti
ENSCVAG00000019848	srrt	96	64.923	ENSRROG00000030622	SRRT	98	63.902	Rhinopithecus_roxellana
ENSCVAG00000019848	srrt	96	65.000	ENSSBOG00000033570	SRRT	96	64.810	Saimiri_boliviensis_boliviensis
ENSCVAG00000019848	srrt	72	61.633	ENSSHAG00000007349	-	99	59.112	Sarcophilus_harrisii
ENSCVAG00000019848	srrt	94	76.225	ENSSFOG00015017293	srrt	95	77.385	Scleropages_formosus
ENSCVAG00000019848	srrt	95	86.158	ENSSMAG00000015342	srrt	95	87.709	Scophthalmus_maximus
ENSCVAG00000019848	srrt	54	63.793	ENSSMAG00000018195	-	94	54.313	Scophthalmus_maximus
ENSCVAG00000019848	srrt	55	55.202	ENSSDUG00000002051	-	93	56.051	Seriola_dumerili
ENSCVAG00000019848	srrt	95	90.334	ENSSDUG00000012049	srrt	91	90.573	Seriola_dumerili
ENSCVAG00000019848	srrt	95	85.536	ENSSLDG00000017477	srrt	95	83.171	Seriola_lalandi_dorsalis
ENSCVAG00000019848	srrt	92	92.576	ENSSPAG00000005665	srrt	94	89.798	Stegastes_partitus
ENSCVAG00000019848	srrt	86	55.327	ENSSPAG00000018943	-	93	57.484	Stegastes_partitus
ENSCVAG00000019848	srrt	95	62.833	ENSSSCG00000024789	SRRT	99	62.546	Sus_scrofa
ENSCVAG00000019848	srrt	90	55.013	ENSTRUG00000000023	-	93	54.421	Takifugu_rubripes
ENSCVAG00000019848	srrt	94	86.580	ENSTRUG00000016075	srrt	95	81.722	Takifugu_rubripes
ENSCVAG00000019848	srrt	74	75.635	ENSTNIG00000011779	srrt	100	73.485	Tetraodon_nigroviridis
ENSCVAG00000019848	srrt	93	55.030	ENSTNIG00000003111	-	94	54.446	Tetraodon_nigroviridis
ENSCVAG00000019848	srrt	61	76.836	ENSTBEG00000005212	SRRT	57	76.836	Tupaia_belangeri
ENSCVAG00000019848	srrt	100	65.034	ENSTTRG00000011104	SRRT	95	64.720	Tursiops_truncatus
ENSCVAG00000019848	srrt	96	64.014	ENSUAMG00000027997	SRRT	98	64.136	Ursus_americanus
ENSCVAG00000019848	srrt	96	64.923	ENSUMAG00000011295	SRRT	95	64.136	Ursus_maritimus
ENSCVAG00000019848	srrt	96	64.804	ENSVVUG00000023572	SRRT	95	65.316	Vulpes_vulpes
ENSCVAG00000019848	srrt	76	75.843	ENSXETG00000025124	srrt	95	55.556	Xenopus_tropicalis
ENSCVAG00000019848	srrt	57	51.967	ENSXCOG00000013105	-	91	53.664	Xiphophorus_couchianus
ENSCVAG00000019848	srrt	92	55.654	ENSXMAG00000002090	-	94	56.760	Xiphophorus_maculatus
ENSCVAG00000019848	srrt	98	91.851	ENSXMAG00000007627	srrt	95	91.766	Xiphophorus_maculatus