EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000019881 (Gene tree)
Gene ID: 107083488
Gene Symbol: srpra
Alias: id:ibd1064|srpr|wu:fd12f02
Full Name: SRP receptor subunit alpha
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 11032 bases
Position: chrKL652575.1:412882-423913
Accession: 107083488
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000016857	SRP54	PF00448.22	5.8e-48	1	1
ENSCVAP00000016857	SRP54_N	PF02881.19	2.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000025350	-	4912	XM_015372766	ENSCVAP00000016857	647 (aa)	XP_015228252	UPI0007428D04

Gene Model

Click here to download ENSCVAG00000019881's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000019881's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000019881	srpra	100	68.445	ENSG00000182934	SRPRA	100	67.674	Homo_sapiens
ENSCVAG00000019881	srpra	100	87.596	ENSAPOG00000017588	srpra	100	87.443	Acanthochromis_polyacanthus
ENSCVAG00000019881	srpra	100	68.750	ENSAMEG00000000117	SRPRA	100	67.982	Ailuropoda_melanoleuca
ENSCVAG00000019881	srpra	100	82.236	ENSACIG00000021588	srpra	100	82.848	Amphilophus_citrinellus
ENSCVAG00000019881	srpra	100	87.443	ENSAOCG00000018884	srpra	100	87.289	Amphiprion_ocellaris
ENSCVAG00000019881	srpra	100	87.596	ENSAPEG00000022286	srpra	100	79.507	Amphiprion_percula
ENSCVAG00000019881	srpra	100	83.206	ENSATEG00000023578	srpra	95	94.225	Anabas_testudineus
ENSCVAG00000019881	srpra	94	72.013	ENSAPLG00000016079	SRPRA	99	71.266	Anas_platyrhynchos
ENSCVAG00000019881	srpra	100	70.336	ENSACAG00000000108	SRPRA	100	70.795	Anolis_carolinensis
ENSCVAG00000019881	srpra	100	68.293	ENSANAG00000020346	SRPRA	100	67.873	Aotus_nancymaae
ENSCVAG00000019881	srpra	100	84.533	ENSACLG00000000518	srpra	100	84.227	Astatotilapia_calliptera
ENSCVAG00000019881	srpra	100	70.833	ENSAMXG00000009975	srpra	54	92.063	Astyanax_mexicanus
ENSCVAG00000019881	srpra	100	67.976	ENSBTAG00000014105	SRPRA	100	67.117	Bos_taurus
ENSCVAG00000019881	srpra	99	49.924	WBGene00009521	F38A1.8	99	49.773	Caenorhabditis_elegans
ENSCVAG00000019881	srpra	100	68.293	ENSCJAG00000008752	SRPRA	100	67.873	Callithrix_jacchus
ENSCVAG00000019881	srpra	100	66.768	ENSCAFG00000010474	SRPRA	100	66.012	Canis_familiaris
ENSCVAG00000019881	srpra	100	68.437	ENSCAFG00020010608	SRPRA	100	67.674	Canis_lupus_dingo
ENSCVAG00000019881	srpra	100	68.341	ENSCHIG00000012423	SRPRA	100	66.917	Capra_hircus
ENSCVAG00000019881	srpra	81	79.781	ENSTSYG00000005187	SRPRA	89	87.619	Carlito_syrichta
ENSCVAG00000019881	srpra	95	65.329	ENSCAPG00000007098	SRPRA	91	87.970	Cavia_aperea
ENSCVAG00000019881	srpra	100	68.485	ENSCPOG00000014976	SRPRA	91	87.970	Cavia_porcellus
ENSCVAG00000019881	srpra	100	68.140	ENSCCAG00000025602	SRPRA	100	67.119	Cebus_capucinus
ENSCVAG00000019881	srpra	100	68.445	ENSCATG00000039354	SRPRA	100	68.024	Cercocebus_atys
ENSCVAG00000019881	srpra	100	68.636	ENSCLAG00000016839	SRPRA	100	67.372	Chinchilla_lanigera
ENSCVAG00000019881	srpra	100	68.293	ENSCSAG00000002271	SRPRA	100	67.873	Chlorocebus_sabaeus
ENSCVAG00000019881	srpra	52	87.755	ENSCHOG00000010015	-	70	87.755	Choloepus_hoffmanni
ENSCVAG00000019881	srpra	100	70.687	ENSCPBG00000011128	SRPRA	100	69.242	Chrysemys_picta_bellii
ENSCVAG00000019881	srpra	99	58.473	ENSCING00000008954	-	100	57.466	Ciona_intestinalis
ENSCVAG00000019881	srpra	99	58.270	ENSCSAVG00000005602	-	100	58.270	Ciona_savignyi
ENSCVAG00000019881	srpra	100	68.293	ENSCANG00000032337	SRPRA	100	67.523	Colobus_angolensis_palliatus
ENSCVAG00000019881	srpra	100	68.684	ENSCGRG00001017670	Srpr	100	68.085	Cricetulus_griseus_chok1gshd
ENSCVAG00000019881	srpra	100	68.684	ENSCGRG00000009892	Srpr	90	88.148	Cricetulus_griseus_crigri
ENSCVAG00000019881	srpra	100	84.332	ENSCSEG00000002374	srpra	100	84.332	Cynoglossus_semilaevis
ENSCVAG00000019881	srpra	100	76.408	ENSDARG00000061124	srpra	100	75.495	Danio_rerio
ENSCVAG00000019881	srpra	100	68.326	ENSDNOG00000010821	SRPRA	100	66.867	Dasypus_novemcinctus
ENSCVAG00000019881	srpra	100	68.589	ENSDORG00000016719	Srpr	100	67.572	Dipodomys_ordii
ENSCVAG00000019881	srpra	99	52.147	FBgn0010391	Gtp-bp	100	52.214	Drosophila_melanogaster
ENSCVAG00000019881	srpra	100	67.523	ENSETEG00000013956	SRPRA	100	67.069	Echinops_telfairi
ENSCVAG00000019881	srpra	50	82.099	ENSEBUG00000002602	srpra	73	82.540	Eptatretus_burgeri
ENSCVAG00000019881	srpra	100	68.445	ENSEASG00005022980	SRPRA	100	67.982	Equus_asinus_asinus
ENSCVAG00000019881	srpra	100	68.445	ENSECAG00000014692	SRPRA	100	67.982	Equus_caballus
ENSCVAG00000019881	srpra	100	63.287	ENSEEUG00000007920	SRPRA	100	62.121	Erinaceus_europaeus
ENSCVAG00000019881	srpra	100	81.431	ENSELUG00000017643	srpra	100	82.137	Esox_lucius
ENSCVAG00000019881	srpra	100	68.645	ENSFCAG00000011274	-	100	67.519	Felis_catus
ENSCVAG00000019881	srpra	80	62.949	ENSFCAG00000030894	-	99	61.639	Felis_catus
ENSCVAG00000019881	srpra	99	65.854	ENSFALG00000005048	SRPRA	99	67.127	Ficedula_albicollis
ENSCVAG00000019881	srpra	100	67.466	ENSFDAG00000016229	SRPRA	92	83.217	Fukomys_damarensis
ENSCVAG00000019881	srpra	100	90.658	ENSFHEG00000016959	srpra	100	90.658	Fundulus_heteroclitus
ENSCVAG00000019881	srpra	100	80.710	ENSGMOG00000013244	srpra	100	80.710	Gadus_morhua
ENSCVAG00000019881	srpra	100	71.933	ENSGALG00000030759	SRPRA	100	71.385	Gallus_gallus
ENSCVAG00000019881	srpra	100	90.505	ENSGAFG00000000453	srpra	100	90.505	Gambusia_affinis
ENSCVAG00000019881	srpra	100	82.236	ENSGACG00000006550	srpra	100	82.236	Gasterosteus_aculeatus
ENSCVAG00000019881	srpra	100	71.603	ENSGAGG00000021157	SRPRA	100	69.592	Gopherus_agassizii
ENSCVAG00000019881	srpra	100	68.445	ENSGGOG00000012962	SRPRA	100	67.674	Gorilla_gorilla
ENSCVAG00000019881	srpra	100	84.380	ENSHBUG00000000119	srpra	100	84.074	Haplochromis_burtoni
ENSCVAG00000019881	srpra	100	67.830	ENSHGLG00000001597	SRPR	94	88.636	Heterocephalus_glaber_female
ENSCVAG00000019881	srpra	100	67.830	ENSHGLG00100006449	SRPR	94	88.636	Heterocephalus_glaber_male
ENSCVAG00000019881	srpra	100	83.817	ENSHCOG00000010749	srpra	100	83.817	Hippocampus_comes
ENSCVAG00000019881	srpra	94	73.990	ENSIPUG00000000867	srpra	99	73.021	Ictalurus_punctatus
ENSCVAG00000019881	srpra	100	68.293	ENSSTOG00000009897	SRPRA	100	67.372	Ictidomys_tridecemlineatus
ENSCVAG00000019881	srpra	100	67.634	ENSJJAG00000020272	Srpr	100	67.372	Jaculus_jaculus
ENSCVAG00000019881	srpra	100	86.963	ENSKMAG00000002280	srpra	100	86.503	Kryptolebias_marmoratus
ENSCVAG00000019881	srpra	100	85.474	ENSLBEG00000009608	srpra	100	85.474	Labrus_bergylta
ENSCVAG00000019881	srpra	100	70.181	ENSLACG00000017781	SRPRA	100	70.977	Latimeria_chalumnae
ENSCVAG00000019881	srpra	100	74.625	ENSLOCG00000002733	srpra	100	74.625	Lepisosteus_oculatus
ENSCVAG00000019881	srpra	100	67.732	ENSLAFG00000010252	SRPRA	100	67.620	Loxodonta_africana
ENSCVAG00000019881	srpra	100	68.445	ENSMFAG00000032606	SRPRA	100	68.024	Macaca_fascicularis
ENSCVAG00000019881	srpra	100	68.445	ENSMMUG00000007938	SRPRA	100	68.024	Macaca_mulatta
ENSCVAG00000019881	srpra	100	68.445	ENSMNEG00000030709	SRPRA	100	67.674	Macaca_nemestrina
ENSCVAG00000019881	srpra	100	68.445	ENSMLEG00000043404	SRPRA	100	68.024	Mandrillus_leucophaeus
ENSCVAG00000019881	srpra	100	84.202	ENSMAMG00000000473	srpra	100	83.282	Mastacembelus_armatus
ENSCVAG00000019881	srpra	100	84.533	ENSMZEG00005013432	srpra	100	84.227	Maylandia_zebra
ENSCVAG00000019881	srpra	94	70.962	ENSMGAG00000000732	SRPRA	100	70.227	Meleagris_gallopavo
ENSCVAG00000019881	srpra	100	68.997	ENSMAUG00000015648	Srpr	100	67.933	Mesocricetus_auratus
ENSCVAG00000019881	srpra	100	68.293	ENSMICG00000015981	SRPRA	100	67.732	Microcebus_murinus
ENSCVAG00000019881	srpra	100	68.741	ENSMOCG00000008311	Srpr	100	67.678	Microtus_ochrogaster
ENSCVAG00000019881	srpra	100	78.648	ENSMMOG00000005019	srpra	100	78.187	Mola_mola
ENSCVAG00000019881	srpra	100	68.807	ENSMODG00000004576	-	100	67.727	Monodelphis_domestica
ENSCVAG00000019881	srpra	100	85.299	ENSMALG00000011343	srpra	100	84.992	Monopterus_albus
ENSCVAG00000019881	srpra	100	68.845	MGP_CAROLIEiJ_G0031951	Srpr	86	89.394	Mus_caroli
ENSCVAG00000019881	srpra	100	69.091	ENSMUSG00000032042	Srpr	86	88.636	Mus_musculus
ENSCVAG00000019881	srpra	100	68.693	MGP_PahariEiJ_G0014816	Srpr	86	88.636	Mus_pahari
ENSCVAG00000019881	srpra	100	66.040	MGP_SPRETEiJ_G0033075	Srpr	100	64.451	Mus_spretus
ENSCVAG00000019881	srpra	100	68.558	ENSMPUG00000006626	SRPRA	100	67.939	Mustela_putorius_furo
ENSCVAG00000019881	srpra	100	68.750	ENSMLUG00000017334	SRPRA	100	67.678	Myotis_lucifugus
ENSCVAG00000019881	srpra	100	68.237	ENSNGAG00000015686	Srpr	100	67.470	Nannospalax_galili
ENSCVAG00000019881	srpra	100	83.920	ENSNBRG00000017311	srpra	100	83.614	Neolamprologus_brichardi
ENSCVAG00000019881	srpra	99	65.244	ENSNLEG00000007467	SRPRA	100	66.772	Nomascus_leucogenys
ENSCVAG00000019881	srpra	94	68.071	ENSMEUG00000004956	SRPRA	100	66.452	Notamacropus_eugenii
ENSCVAG00000019881	srpra	100	64.472	ENSOPRG00000013160	SRPRA	100	63.872	Ochotona_princeps
ENSCVAG00000019881	srpra	100	68.285	ENSODEG00000004730	SRPRA	100	67.625	Octodon_degus
ENSCVAG00000019881	srpra	100	84.227	ENSONIG00000005324	srpra	100	83.920	Oreochromis_niloticus
ENSCVAG00000019881	srpra	100	68.445	ENSOCUG00000017057	SRPRA	100	68.030	Oryctolagus_cuniculus
ENSCVAG00000019881	srpra	100	82.669	ENSORLG00000014676	srpra	95	95.441	Oryzias_latipes
ENSCVAG00000019881	srpra	100	82.362	ENSORLG00020009240	srpra	100	82.362	Oryzias_latipes_hni
ENSCVAG00000019881	srpra	100	82.362	ENSORLG00015015405	srpra	100	82.362	Oryzias_latipes_hsok
ENSCVAG00000019881	srpra	100	83.436	ENSOMEG00000005872	srpra	100	83.436	Oryzias_melastigma
ENSCVAG00000019881	srpra	100	68.445	ENSOGAG00000008926	SRPRA	100	67.722	Otolemur_garnettii
ENSCVAG00000019881	srpra	100	65.099	ENSOARG00000012397	SRPRA	100	65.067	Ovis_aries
ENSCVAG00000019881	srpra	100	68.445	ENSPPAG00000030813	SRPRA	100	67.674	Pan_paniscus
ENSCVAG00000019881	srpra	100	68.645	ENSPPRG00000001542	SRPRA	100	67.519	Panthera_pardus
ENSCVAG00000019881	srpra	100	68.493	ENSPTIG00000006989	SRPRA	100	67.368	Panthera_tigris_altaica
ENSCVAG00000019881	srpra	100	68.445	ENSPTRG00000028360	SRPRA	100	67.674	Pan_troglodytes
ENSCVAG00000019881	srpra	100	68.445	ENSPANG00000010858	SRPRA	100	68.024	Papio_anubis
ENSCVAG00000019881	srpra	100	74.697	ENSPKIG00000016106	srpra	100	75.000	Paramormyrops_kingsleyae
ENSCVAG00000019881	srpra	94	70.942	ENSPSIG00000012009	SRPRA	100	69.741	Pelodiscus_sinensis
ENSCVAG00000019881	srpra	100	84.049	ENSPMGG00000001393	srpra	100	82.848	Periophthalmus_magnuspinnatus
ENSCVAG00000019881	srpra	100	68.997	ENSPEMG00000018279	Srpr	100	67.625	Peromyscus_maniculatus_bairdii
ENSCVAG00000019881	srpra	99	63.020	ENSPMAG00000009559	srpra	99	61.796	Petromyzon_marinus
ENSCVAG00000019881	srpra	100	67.669	ENSPCIG00000010207	SRPRA	100	67.365	Phascolarctos_cinereus
ENSCVAG00000019881	srpra	100	90.199	ENSPFOG00000003114	srpra	100	90.046	Poecilia_formosa
ENSCVAG00000019881	srpra	100	90.352	ENSPLAG00000007323	srpra	100	90.199	Poecilia_latipinna
ENSCVAG00000019881	srpra	100	90.046	ENSPMEG00000015658	srpra	100	89.893	Poecilia_mexicana
ENSCVAG00000019881	srpra	100	90.812	ENSPREG00000004937	srpra	100	90.658	Poecilia_reticulata
ENSCVAG00000019881	srpra	89	86.842	ENSPPYG00000004045	SRPRA	100	86.842	Pongo_abelii
ENSCVAG00000019881	srpra	62	90.698	ENSPCAG00000003801	-	64	90.698	Procavia_capensis
ENSCVAG00000019881	srpra	100	68.140	ENSPCOG00000025726	SRPRA	100	67.223	Propithecus_coquereli
ENSCVAG00000019881	srpra	100	68.750	ENSPVAG00000000993	SRPRA	100	67.674	Pteropus_vampyrus
ENSCVAG00000019881	srpra	100	84.533	ENSPNYG00000012371	srpra	100	84.227	Pundamilia_nyererei
ENSCVAG00000019881	srpra	100	78.135	ENSPNAG00000013476	srpra	100	77.252	Pygocentrus_nattereri
ENSCVAG00000019881	srpra	100	68.684	ENSRNOG00000010543	Srpra	100	67.625	Rattus_norvegicus
ENSCVAG00000019881	srpra	100	69.080	ENSRBIG00000008702	SRPRA	100	67.873	Rhinopithecus_bieti
ENSCVAG00000019881	srpra	100	67.994	ENSRROG00000029494	SRPRA	100	67.576	Rhinopithecus_roxellana
ENSCVAG00000019881	srpra	50	41.449	YDR292C	-	52	41.515	Saccharomyces_cerevisiae
ENSCVAG00000019881	srpra	100	68.140	ENSSBOG00000035892	SRPRA	100	67.722	Saimiri_boliviensis_boliviensis
ENSCVAG00000019881	srpra	94	67.695	ENSSHAG00000009168	SRPRA	100	66.667	Sarcophilus_harrisii
ENSCVAG00000019881	srpra	100	72.000	ENSSFOG00015008837	srpra	100	72.923	Scleropages_formosus
ENSCVAG00000019881	srpra	100	78.341	ENSSMAG00000002783	srpra	100	77.727	Scophthalmus_maximus
ENSCVAG00000019881	srpra	100	86.544	ENSSDUG00000013920	srpra	92	85.933	Seriola_dumerili
ENSCVAG00000019881	srpra	100	86.239	ENSSLDG00000008601	srpra	93	85.627	Seriola_lalandi_dorsalis
ENSCVAG00000019881	srpra	81	85.366	ENSSARG00000012434	SRPRA	86	85.366	Sorex_araneus
ENSCVAG00000019881	srpra	100	69.113	ENSSPUG00000018221	SRPRA	100	69.113	Sphenodon_punctatus
ENSCVAG00000019881	srpra	100	88.244	ENSSPAG00000005103	srpra	100	88.092	Stegastes_partitus
ENSCVAG00000019881	srpra	100	68.598	ENSSSCG00000015227	SRPRA	100	67.976	Sus_scrofa
ENSCVAG00000019881	srpra	94	67.576	ENSTGUG00000000815	SRPRA	100	67.480	Taeniopygia_guttata
ENSCVAG00000019881	srpra	100	83.103	ENSTRUG00000006856	srpra	100	82.488	Takifugu_rubripes
ENSCVAG00000019881	srpra	100	77.711	ENSTNIG00000010316	srpra	100	77.711	Tetraodon_nigroviridis
ENSCVAG00000019881	srpra	100	68.502	ENSTTRG00000001558	SRPRA	100	67.270	Tursiops_truncatus
ENSCVAG00000019881	srpra	100	68.300	ENSUAMG00000005510	SRPRA	100	67.226	Ursus_americanus
ENSCVAG00000019881	srpra	96	62.835	ENSUMAG00000002269	SRPRA	100	62.205	Ursus_maritimus
ENSCVAG00000019881	srpra	69	90.698	ENSVPAG00000001077	SRPRA	75	90.698	Vicugna_pacos
ENSCVAG00000019881	srpra	100	68.445	ENSVVUG00000020094	SRPRA	100	67.884	Vulpes_vulpes
ENSCVAG00000019881	srpra	100	63.126	ENSXETG00000003920	srpra	100	62.085	Xenopus_tropicalis
ENSCVAG00000019881	srpra	90	91.292	ENSXCOG00000001286	srpra	100	96.960	Xiphophorus_couchianus
ENSCVAG00000019881	srpra	100	90.199	ENSXMAG00000028401	srpra	100	90.199	Xiphophorus_maculatus