EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000019969 (Gene tree)
Gene ID: 107102773
Gene Symbol: dbr1
Alias: wu:fc08f08|zgc:63930
Full Name: debranching RNA lariats 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 11776 bases
Position: chrKL653816.1:71166-82941
Accession: 107102773
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000031011	DBR1	PF05011.13	6.6e-35	1	1
ENSCVAP00000031013	DBR1	PF05011.13	6.6e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000032106	-	3130	-	ENSCVAP00000031011	553 (aa)	-	UPI000742A0DA
ENSCVAT00000032105	-	2570	XM_015402198	ENSCVAP00000031013	553 (aa)	XP_015257684	UPI000742A0DA

Gene Model

Click here to download ENSCVAG00000019969's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000019969's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000019969	dbr1	99	56.295	ENSG00000138231	DBR1	94	80.180	Homo_sapiens
ENSCVAG00000019969	dbr1	99	76.649	ENSAPOG00000004318	dbr1	99	76.565	Acanthochromis_polyacanthus
ENSCVAG00000019969	dbr1	98	55.191	ENSAMEG00000006272	DBR1	99	54.078	Ailuropoda_melanoleuca
ENSCVAG00000019969	dbr1	99	77.058	ENSACIG00000020512	dbr1	99	77.289	Amphilophus_citrinellus
ENSCVAG00000019969	dbr1	99	76.690	ENSAOCG00000008060	dbr1	99	76.386	Amphiprion_ocellaris
ENSCVAG00000019969	dbr1	99	76.868	ENSAPEG00000021944	dbr1	99	76.565	Amphiprion_percula
ENSCVAG00000019969	dbr1	99	75.806	ENSATEG00000019673	dbr1	99	75.465	Anabas_testudineus
ENSCVAG00000019969	dbr1	99	54.383	ENSACAG00000016760	DBR1	99	54.270	Anolis_carolinensis
ENSCVAG00000019969	dbr1	98	56.443	ENSANAG00000028952	DBR1	99	55.360	Aotus_nancymaae
ENSCVAG00000019969	dbr1	99	77.061	ENSACLG00000024027	dbr1	99	76.703	Astatotilapia_calliptera
ENSCVAG00000019969	dbr1	99	65.799	ENSAMXG00000030736	dbr1	99	65.565	Astyanax_mexicanus
ENSCVAG00000019969	dbr1	99	55.117	ENSBTAG00000019949	DBR1	99	53.819	Bos_taurus
ENSCVAG00000019969	dbr1	68	47.583	WBGene00000937	dbr-1	78	47.583	Caenorhabditis_elegans
ENSCVAG00000019969	dbr1	99	55.776	ENSCJAG00000002433	DBR1	99	54.833	Callithrix_jacchus
ENSCVAG00000019969	dbr1	78	64.368	ENSCAFG00000007501	DBR1	99	54.401	Canis_familiaris
ENSCVAG00000019969	dbr1	78	64.368	ENSCAFG00020008060	DBR1	99	54.401	Canis_lupus_dingo
ENSCVAG00000019969	dbr1	99	55.357	ENSCHIG00000026937	DBR1	99	54.610	Capra_hircus
ENSCVAG00000019969	dbr1	100	54.025	ENSTSYG00000005317	DBR1	99	53.286	Carlito_syrichta
ENSCVAG00000019969	dbr1	99	54.054	ENSCPOG00000006179	DBR1	99	52.660	Cavia_porcellus
ENSCVAG00000019969	dbr1	99	55.957	ENSCCAG00000025708	DBR1	99	54.737	Cebus_capucinus
ENSCVAG00000019969	dbr1	78	64.286	ENSCATG00000032054	DBR1	99	55.044	Cercocebus_atys
ENSCVAG00000019969	dbr1	99	56.014	ENSCLAG00000001800	DBR1	99	54.433	Chinchilla_lanigera
ENSCVAG00000019969	dbr1	78	64.055	ENSCSAG00000010977	DBR1	99	54.867	Chlorocebus_sabaeus
ENSCVAG00000019969	dbr1	89	66.667	ENSCHOG00000000730	DBR1	89	66.667	Choloepus_hoffmanni
ENSCVAG00000019969	dbr1	99	55.235	ENSCPBG00000007633	DBR1	90	55.235	Chrysemys_picta_bellii
ENSCVAG00000019969	dbr1	79	53.215	ENSCING00000011388	-	87	58.333	Ciona_intestinalis
ENSCVAG00000019969	dbr1	68	58.730	ENSCSAVG00000007545	-	100	58.730	Ciona_savignyi
ENSCVAG00000019969	dbr1	99	56.475	ENSCANG00000024237	DBR1	99	55.044	Colobus_angolensis_palliatus
ENSCVAG00000019969	dbr1	99	55.458	ENSCGRG00001018497	Dbr1	99	52.668	Cricetulus_griseus_chok1gshd
ENSCVAG00000019969	dbr1	99	50.704	ENSCGRG00000005958	Dbr1	99	48.097	Cricetulus_griseus_crigri
ENSCVAG00000019969	dbr1	100	72.420	ENSCSEG00000002813	dbr1	99	72.242	Cynoglossus_semilaevis
ENSCVAG00000019969	dbr1	99	65.679	ENSDARG00000056923	dbr1	99	65.794	Danio_rerio
ENSCVAG00000019969	dbr1	99	56.727	ENSDNOG00000043630	DBR1	99	56.194	Dasypus_novemcinctus
ENSCVAG00000019969	dbr1	68	52.871	FBgn0035838	ldbr	78	52.983	Drosophila_melanogaster
ENSCVAG00000019969	dbr1	58	81.343	ENSETEG00000011830	DBR1	58	81.343	Echinops_telfairi
ENSCVAG00000019969	dbr1	99	46.771	ENSEBUG00000007494	dbr1	100	47.295	Eptatretus_burgeri
ENSCVAG00000019969	dbr1	99	55.495	ENSEASG00005003788	DBR1	99	54.707	Equus_asinus_asinus
ENSCVAG00000019969	dbr1	99	55.676	ENSECAG00000013920	DBR1	99	54.885	Equus_caballus
ENSCVAG00000019969	dbr1	99	45.617	ENSEEUG00000007059	DBR1	99	45.133	Erinaceus_europaeus
ENSCVAG00000019969	dbr1	99	69.027	ENSELUG00000005587	dbr1	99	69.558	Esox_lucius
ENSCVAG00000019969	dbr1	99	55.814	ENSFCAG00000002229	DBR1	99	55.203	Felis_catus
ENSCVAG00000019969	dbr1	99	55.935	ENSFALG00000013467	DBR1	86	56.295	Ficedula_albicollis
ENSCVAG00000019969	dbr1	78	64.434	ENSFDAG00000009524	DBR1	99	54.758	Fukomys_damarensis
ENSCVAG00000019969	dbr1	99	85.225	ENSFHEG00000001743	dbr1	99	85.225	Fundulus_heteroclitus
ENSCVAG00000019969	dbr1	99	70.232	ENSGMOG00000006925	dbr1	99	70.053	Gadus_morhua
ENSCVAG00000019969	dbr1	100	49.192	ENSGALG00000043797	DBR1	99	49.013	Gallus_gallus
ENSCVAG00000019969	dbr1	99	83.696	ENSGAFG00000001046	dbr1	99	81.522	Gambusia_affinis
ENSCVAG00000019969	dbr1	99	75.090	ENSGACG00000009122	dbr1	99	73.166	Gasterosteus_aculeatus
ENSCVAG00000019969	dbr1	99	54.973	ENSGAGG00000001244	DBR1	100	54.973	Gopherus_agassizii
ENSCVAG00000019969	dbr1	99	51.978	ENSGGOG00000004564	DBR1	99	50.796	Gorilla_gorilla
ENSCVAG00000019969	dbr1	99	77.240	ENSHBUG00000000882	dbr1	99	76.882	Haplochromis_burtoni
ENSCVAG00000019969	dbr1	99	55.636	ENSHGLG00000014529	Dbr1	99	54.496	Heterocephalus_glaber_female
ENSCVAG00000019969	dbr1	99	55.636	ENSHGLG00100013202	Dbr1	99	54.496	Heterocephalus_glaber_male
ENSCVAG00000019969	dbr1	99	71.325	ENSHCOG00000004179	dbr1	99	71.325	Hippocampus_comes
ENSCVAG00000019969	dbr1	99	65.232	ENSIPUG00000023749	dbr1	99	64.888	Ictalurus_punctatus
ENSCVAG00000019969	dbr1	99	55.776	ENSSTOG00000007122	DBR1	99	55.437	Ictidomys_tridecemlineatus
ENSCVAG00000019969	dbr1	99	55.036	ENSJJAG00000017080	Dbr1	99	54.676	Jaculus_jaculus
ENSCVAG00000019969	dbr1	100	77.297	ENSKMAG00000004869	dbr1	100	77.117	Kryptolebias_marmoratus
ENSCVAG00000019969	dbr1	100	73.982	ENSLBEG00000021307	dbr1	99	75.488	Labrus_bergylta
ENSCVAG00000019969	dbr1	99	58.467	ENSLACG00000005547	DBR1	99	58.289	Latimeria_chalumnae
ENSCVAG00000019969	dbr1	100	64.831	ENSLOCG00000004160	dbr1	99	65.432	Lepisosteus_oculatus
ENSCVAG00000019969	dbr1	99	54.676	ENSLAFG00000005827	DBR1	99	54.676	Loxodonta_africana
ENSCVAG00000019969	dbr1	78	64.286	ENSMFAG00000043642	DBR1	99	54.885	Macaca_fascicularis
ENSCVAG00000019969	dbr1	78	64.286	ENSMMUG00000021284	DBR1	99	54.885	Macaca_mulatta
ENSCVAG00000019969	dbr1	78	64.286	ENSMNEG00000041740	DBR1	99	54.885	Macaca_nemestrina
ENSCVAG00000019969	dbr1	67	51.200	ENSMLEG00000034542	DBR1	95	44.118	Mandrillus_leucophaeus
ENSCVAG00000019969	dbr1	100	76.377	ENSMAMG00000012205	dbr1	99	76.021	Mastacembelus_armatus
ENSCVAG00000019969	dbr1	99	77.061	ENSMZEG00005021338	dbr1	99	76.703	Maylandia_zebra
ENSCVAG00000019969	dbr1	80	50.000	ENSMGAG00000002142	DBR1	99	49.778	Meleagris_gallopavo
ENSCVAG00000019969	dbr1	99	56.283	ENSMAUG00000010037	Dbr1	99	53.806	Mesocricetus_auratus
ENSCVAG00000019969	dbr1	78	64.055	ENSMICG00000049533	DBR1	99	54.594	Microcebus_murinus
ENSCVAG00000019969	dbr1	99	56.306	ENSMOCG00000018746	Dbr1	100	53.217	Microtus_ochrogaster
ENSCVAG00000019969	dbr1	99	73.665	ENSMMOG00000000719	dbr1	99	73.665	Mola_mola
ENSCVAG00000019969	dbr1	99	55.615	ENSMODG00000018554	DBR1	99	53.873	Monodelphis_domestica
ENSCVAG00000019969	dbr1	99	74.067	ENSMALG00000022283	dbr1	97	74.067	Monopterus_albus
ENSCVAG00000019969	dbr1	99	56.577	MGP_CAROLIEiJ_G0032564	Dbr1	95	65.823	Mus_caroli
ENSCVAG00000019969	dbr1	99	56.306	ENSMUSG00000032469	Dbr1	95	65.823	Mus_musculus
ENSCVAG00000019969	dbr1	100	55.398	MGP_PahariEiJ_G0015433	Dbr1	95	65.823	Mus_pahari
ENSCVAG00000019969	dbr1	100	56.714	MGP_SPRETEiJ_G0033708	Dbr1	95	65.823	Mus_spretus
ENSCVAG00000019969	dbr1	99	55.338	ENSMPUG00000009230	DBR1	99	54.674	Mustela_putorius_furo
ENSCVAG00000019969	dbr1	78	63.426	ENSMLUG00000026117	DBR1	99	53.628	Myotis_lucifugus
ENSCVAG00000019969	dbr1	99	54.741	ENSNGAG00000003518	Dbr1	99	54.011	Nannospalax_galili
ENSCVAG00000019969	dbr1	99	76.344	ENSNBRG00000016318	dbr1	99	75.583	Neolamprologus_brichardi
ENSCVAG00000019969	dbr1	99	56.115	ENSNLEG00000032263	DBR1	97	54.867	Nomascus_leucogenys
ENSCVAG00000019969	dbr1	99	54.545	ENSMEUG00000009188	DBR1	99	53.710	Notamacropus_eugenii
ENSCVAG00000019969	dbr1	93	48.762	ENSOPRG00000016510	DBR1	99	48.000	Ochotona_princeps
ENSCVAG00000019969	dbr1	99	56.328	ENSODEG00000018178	DBR1	99	55.971	Octodon_degus
ENSCVAG00000019969	dbr1	99	77.102	ENSONIG00000013801	dbr1	99	76.744	Oreochromis_niloticus
ENSCVAG00000019969	dbr1	89	53.441	ENSOANG00000007783	DBR1	100	53.119	Ornithorhynchus_anatinus
ENSCVAG00000019969	dbr1	93	55.364	ENSOCUG00000015129	DBR1	89	54.631	Oryctolagus_cuniculus
ENSCVAG00000019969	dbr1	99	72.333	ENSORLG00015001112	dbr1	99	72.333	Oryzias_latipes_hsok
ENSCVAG00000019969	dbr1	99	73.285	ENSOMEG00000000857	dbr1	99	72.826	Oryzias_melastigma
ENSCVAG00000019969	dbr1	98	56.420	ENSOGAG00000033095	DBR1	99	55.398	Otolemur_garnettii
ENSCVAG00000019969	dbr1	99	54.286	ENSOARG00000007589	DBR1	99	53.546	Ovis_aries
ENSCVAG00000019969	dbr1	99	55.957	ENSPPAG00000031137	DBR1	99	54.690	Pan_paniscus
ENSCVAG00000019969	dbr1	99	55.814	ENSPPRG00000013629	DBR1	99	55.203	Panthera_pardus
ENSCVAG00000019969	dbr1	96	55.210	ENSPTIG00000012674	DBR1	98	54.595	Panthera_tigris_altaica
ENSCVAG00000019969	dbr1	99	56.137	ENSPTRG00000015441	DBR1	99	54.867	Pan_troglodytes
ENSCVAG00000019969	dbr1	78	64.286	ENSPANG00000012664	DBR1	99	55.044	Papio_anubis
ENSCVAG00000019969	dbr1	99	65.565	ENSPKIG00000000310	dbr1	99	65.043	Paramormyrops_kingsleyae
ENSCVAG00000019969	dbr1	88	54.970	ENSPSIG00000015486	DBR1	99	54.286	Pelodiscus_sinensis
ENSCVAG00000019969	dbr1	99	56.762	ENSPEMG00000020602	Dbr1	98	54.246	Peromyscus_maniculatus_bairdii
ENSCVAG00000019969	dbr1	68	60.317	ENSPMAG00000008620	dbr1	99	60.317	Petromyzon_marinus
ENSCVAG00000019969	dbr1	99	55.258	ENSPCIG00000006494	DBR1	99	53.684	Phascolarctos_cinereus
ENSCVAG00000019969	dbr1	99	84.058	ENSPLAG00000011665	dbr1	99	82.065	Poecilia_latipinna
ENSCVAG00000019969	dbr1	70	80.103	ENSPLAG00000002421	-	99	77.261	Poecilia_latipinna
ENSCVAG00000019969	dbr1	99	84.239	ENSPMEG00000010080	dbr1	99	82.609	Poecilia_mexicana
ENSCVAG00000019969	dbr1	71	79.494	ENSPMEG00000020884	-	94	77.215	Poecilia_mexicana
ENSCVAG00000019969	dbr1	99	83.514	ENSPREG00000020157	dbr1	99	81.884	Poecilia_reticulata
ENSCVAG00000019969	dbr1	99	56.295	ENSPPYG00000014139	DBR1	99	55.044	Pongo_abelii
ENSCVAG00000019969	dbr1	68	67.018	ENSPCAG00000012956	DBR1	97	67.018	Procavia_capensis
ENSCVAG00000019969	dbr1	99	55.738	ENSPCOG00000016894	DBR1	99	54.770	Propithecus_coquereli
ENSCVAG00000019969	dbr1	99	47.464	ENSPVAG00000007713	DBR1	99	46.964	Pteropus_vampyrus
ENSCVAG00000019969	dbr1	99	77.419	ENSPNYG00000015453	dbr1	99	77.061	Pundamilia_nyererei
ENSCVAG00000019969	dbr1	99	66.081	ENSPNAG00000025595	dbr1	99	66.087	Pygocentrus_nattereri
ENSCVAG00000019969	dbr1	100	54.561	ENSRNOG00000014588	Dbr1	99	54.577	Rattus_norvegicus
ENSCVAG00000019969	dbr1	99	55.676	ENSRBIG00000045002	DBR1	99	54.174	Rhinopithecus_bieti
ENSCVAG00000019969	dbr1	99	55.935	ENSRROG00000044819	DBR1	99	54.690	Rhinopithecus_roxellana
ENSCVAG00000019969	dbr1	51	37.725	YKL149C	DBR1	82	38.024	Saccharomyces_cerevisiae
ENSCVAG00000019969	dbr1	99	56.137	ENSSBOG00000032048	DBR1	99	54.885	Saimiri_boliviensis_boliviensis
ENSCVAG00000019969	dbr1	99	55.376	ENSSHAG00000006752	DBR1	99	53.616	Sarcophilus_harrisii
ENSCVAG00000019969	dbr1	100	66.552	ENSSFOG00015011410	dbr1	99	66.548	Scleropages_formosus
ENSCVAG00000019969	dbr1	99	74.645	ENSSMAG00000016078	dbr1	99	73.227	Scophthalmus_maximus
ENSCVAG00000019969	dbr1	99	76.460	ENSSDUG00000017849	dbr1	99	76.460	Seriola_dumerili
ENSCVAG00000019969	dbr1	99	77.087	ENSSLDG00000019891	dbr1	99	76.909	Seriola_lalandi_dorsalis
ENSCVAG00000019969	dbr1	79	58.542	ENSSARG00000009558	-	71	63.255	Sorex_araneus
ENSCVAG00000019969	dbr1	93	50.485	ENSSPUG00000004724	DBR1	93	52.121	Sphenodon_punctatus
ENSCVAG00000019969	dbr1	99	78.995	ENSSPAG00000016892	dbr1	99	78.777	Stegastes_partitus
ENSCVAG00000019969	dbr1	99	55.396	ENSSSCG00000031098	DBR1	99	55.396	Sus_scrofa
ENSCVAG00000019969	dbr1	96	53.704	ENSTGUG00000007073	DBR1	99	53.704	Taeniopygia_guttata
ENSCVAG00000019969	dbr1	99	70.968	ENSTRUG00000021594	dbr1	98	70.789	Takifugu_rubripes
ENSCVAG00000019969	dbr1	99	69.410	ENSTNIG00000006710	dbr1	99	68.336	Tetraodon_nigroviridis
ENSCVAG00000019969	dbr1	99	54.529	ENSTTRG00000004020	DBR1	99	53.901	Tursiops_truncatus
ENSCVAG00000019969	dbr1	100	54.674	ENSUAMG00000004639	DBR1	99	54.321	Ursus_americanus
ENSCVAG00000019969	dbr1	78	63.825	ENSUMAG00000015012	DBR1	99	54.145	Ursus_maritimus
ENSCVAG00000019969	dbr1	99	50.808	ENSVPAG00000011711	DBR1	99	50.808	Vicugna_pacos
ENSCVAG00000019969	dbr1	78	64.138	ENSVVUG00000026604	DBR1	99	54.401	Vulpes_vulpes
ENSCVAG00000019969	dbr1	99	57.549	ENSXETG00000027491	dbr1	99	55.476	Xenopus_tropicalis
ENSCVAG00000019969	dbr1	99	84.058	ENSXCOG00000018078	dbr1	99	81.884	Xiphophorus_couchianus
ENSCVAG00000019969	dbr1	99	84.239	ENSXMAG00000007311	dbr1	99	82.428	Xiphophorus_maculatus