EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000020016 (Gene tree)
Gene ID: 107104048
Gene Symbol: rab11al
Alias: fc54g10|wu:fc54g10|zgc:63565
Full Name: ras-related protein Rab-11A-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 21511 bases
Position: chrKL654100.1:61685-83195
Accession: 107104048
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000016989	MMR_HSR1	PF01926.23	3.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000025519	-	4441	XM_015403958	ENSCVAP00000016989	216 (aa)	XP_015259444	UPI0007425555

Gene Model

Click here to download ENSCVAG00000020016's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000020016's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000020016	rab11al	53	30.252	ENSCVAG00000020902	arl4cb	60	30.252
ENSCVAG00000020016	rab11al	88	31.746	ENSCVAG00000020501	rab23	98	32.212
ENSCVAG00000020016	rab11al	96	44.550	ENSCVAG00000009222	zgc:171927	99	44.550
ENSCVAG00000020016	rab11al	99	81.481	ENSCVAG00000019751	-	99	81.481
ENSCVAG00000020016	rab11al	86	34.392	ENSCVAG00000004751	rab6bb	91	34.392
ENSCVAG00000020016	rab11al	91	35.533	ENSCVAG00000001618	rab41	92	35.533
ENSCVAG00000020016	rab11al	73	48.408	ENSCVAG00000008239	rab5aa	73	48.408
ENSCVAG00000020016	rab11al	93	33.168	ENSCVAG00000022249	rab6a	93	33.168
ENSCVAG00000020016	rab11al	91	44.335	ENSCVAG00000015862	-	94	44.335
ENSCVAG00000020016	rab11al	98	35.945	ENSCVAG00000016312	rab9a	95	35.945
ENSCVAG00000020016	rab11al	99	81.106	ENSCVAG00000017021	-	99	81.106
ENSCVAG00000020016	rab11al	96	42.512	ENSCVAG00000012806	rab35b	99	42.654
ENSCVAG00000020016	rab11al	94	38.725	ENSCVAG00000014416	-	91	38.725
ENSCVAG00000020016	rab11al	73	48.408	ENSCVAG00000009550	rab5c	71	48.408
ENSCVAG00000020016	rab11al	85	41.304	ENSCVAG00000015451	rab18a	98	39.234
ENSCVAG00000020016	rab11al	95	31.455	ENSCVAG00000014038	RAB29	99	31.455
ENSCVAG00000020016	rab11al	94	42.233	ENSCVAG00000014915	RAB39B	96	42.233
ENSCVAG00000020016	rab11al	73	43.312	ENSCVAG00000018433	rab22a	81	43.312
ENSCVAG00000020016	rab11al	73	40.491	ENSCVAG00000011665	rab33a	59	40.491
ENSCVAG00000020016	rab11al	71	30.303	ENSCVAG00000013135	rasl11a	64	30.303
ENSCVAG00000020016	rab11al	73	39.877	ENSCVAG00000005429	-	78	39.877
ENSCVAG00000020016	rab11al	73	36.306	ENSCVAG00000011432	rabl2	70	36.306
ENSCVAG00000020016	rab11al	95	43.415	ENSCVAG00000022649	-	98	43.415
ENSCVAG00000020016	rab11al	67	42.000	ENSCVAG00000000862	-	66	42.000
ENSCVAG00000020016	rab11al	97	34.884	ENSCVAG00000017064	si:dkey-34d22.5	95	34.884
ENSCVAG00000020016	rab11al	77	54.819	ENSCVAG00000022353	rab14	77	54.819
ENSCVAG00000020016	rab11al	99	85.116	ENSCVAG00000013878	rab11a	99	85.116
ENSCVAG00000020016	rab11al	79	52.632	ENSCVAG00000010727	rab4a	80	52.632
ENSCVAG00000020016	rab11al	69	34.667	ENSCVAG00000008670	hrasb	85	35.802
ENSCVAG00000020016	rab11al	96	46.860	ENSCVAG00000022799	-	99	46.860
ENSCVAG00000020016	rab11al	95	46.154	ENSCVAG00000022585	-	97	46.154
ENSCVAG00000020016	rab11al	74	32.919	ENSCVAG00000004027	rheb	87	32.919
ENSCVAG00000020016	rab11al	95	47.222	ENSCVAG00000017623	rab2a	99	47.222
ENSCVAG00000020016	rab11al	79	38.150	ENSCVAG00000019227	zgc:101559	74	38.150
ENSCVAG00000020016	rab11al	94	35.096	ENSCVAG00000002953	RAB9A	98	35.096
ENSCVAG00000020016	rab11al	88	34.211	ENSCVAG00000012889	rab6ba	91	34.211
ENSCVAG00000020016	rab11al	99	80.093	ENSCVAG00000019718	-	99	80.093
ENSCVAG00000020016	rab11al	98	63.208	ENSCVAG00000008126	-	99	63.208
ENSCVAG00000020016	rab11al	72	31.013	ENSCVAG00000008389	si:ch73-116o1.2	81	32.941
ENSCVAG00000020016	rab11al	74	44.025	ENSCVAG00000008276	RAB15	81	49.495
ENSCVAG00000020016	rab11al	94	35.577	ENSCVAG00000021826	rab9b	97	35.577
ENSCVAG00000020016	rab11al	66	34.722	ENSCVAG00000006083	si:cabz01085950.1	71	34.722
ENSCVAG00000020016	rab11al	98	62.085	ENSCVAG00000020003	rab25b	98	62.871
ENSCVAG00000020016	rab11al	74	46.875	ENSCVAG00000018085	rab30	79	46.875
ENSCVAG00000020016	rab11al	73	39.877	ENSCVAG00000000281	RAB7A	78	39.877
ENSCVAG00000020016	rab11al	81	44.828	ENSCVAG00000003537	si:dkey-16l2.16	98	38.942
ENSCVAG00000020016	rab11al	76	43.030	ENSCVAG00000003539	rab12	83	37.379
ENSCVAG00000020016	rab11al	71	34.375	ENSCVAG00000001150	si:dkey-13a21.4	77	34.375
ENSCVAG00000020016	rab11al	69	35.333	ENSCVAG00000006062	KRAS	91	34.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000020016	rab11al	100	93.056	ENSAPOG00000008251	rab11al	100	93.056	Acanthochromis_polyacanthus
ENSCVAG00000020016	rab11al	100	93.981	ENSACIG00000017403	rab11al	100	93.981	Amphilophus_citrinellus
ENSCVAG00000020016	rab11al	100	93.519	ENSAOCG00000015678	rab11al	100	93.519	Amphiprion_ocellaris
ENSCVAG00000020016	rab11al	100	93.519	ENSAPEG00000022135	rab11al	100	93.519	Amphiprion_percula
ENSCVAG00000020016	rab11al	100	92.593	ENSATEG00000006156	rab11al	100	92.593	Anabas_testudineus
ENSCVAG00000020016	rab11al	100	93.981	ENSACLG00000010268	rab11al	100	93.981	Astatotilapia_calliptera
ENSCVAG00000020016	rab11al	94	85.222	ENSAMXG00000024632	rab11al	93	85.222	Astyanax_mexicanus
ENSCVAG00000020016	rab11al	94	80.198	ENSCPBG00000025819	-	99	80.198	Chrysemys_picta_bellii
ENSCVAG00000020016	rab11al	100	94.444	ENSCSEG00000011996	rab11al	100	94.444	Cynoglossus_semilaevis
ENSCVAG00000020016	rab11al	100	89.352	ENSDARG00000014340	rab11al	100	89.352	Danio_rerio
ENSCVAG00000020016	rab11al	100	91.204	ENSELUG00000012035	rab11al	100	91.204	Esox_lucius
ENSCVAG00000020016	rab11al	99	81.395	ENSFALG00000002594	-	91	81.395	Ficedula_albicollis
ENSCVAG00000020016	rab11al	96	99.519	ENSFHEG00000000832	rab11al	99	99.519	Fundulus_heteroclitus
ENSCVAG00000020016	rab11al	94	86.634	ENSGMOG00000006450	rab11al	100	86.634	Gadus_morhua
ENSCVAG00000020016	rab11al	99	79.070	ENSGALG00000037802	-	50	79.070	Gallus_gallus
ENSCVAG00000020016	rab11al	100	97.685	ENSGAFG00000021725	rab11al	100	97.685	Gambusia_affinis
ENSCVAG00000020016	rab11al	100	92.593	ENSGACG00000013259	rab11al	100	92.593	Gasterosteus_aculeatus
ENSCVAG00000020016	rab11al	99	80.930	ENSGAGG00000020702	-	99	80.930	Gopherus_agassizii
ENSCVAG00000020016	rab11al	100	93.981	ENSHBUG00000009333	rab11al	100	93.981	Haplochromis_burtoni
ENSCVAG00000020016	rab11al	100	93.981	ENSHCOG00000000232	rab11al	100	93.981	Hippocampus_comes
ENSCVAG00000020016	rab11al	100	91.204	ENSIPUG00000006091	RAB11A	100	91.204	Ictalurus_punctatus
ENSCVAG00000020016	rab11al	100	88.889	ENSKMAG00000015516	rab11al	100	88.889	Kryptolebias_marmoratus
ENSCVAG00000020016	rab11al	100	93.056	ENSLBEG00000016417	rab11al	100	93.056	Labrus_bergylta
ENSCVAG00000020016	rab11al	99	80.000	ENSLACG00000011380	rab11al	99	80.000	Latimeria_chalumnae
ENSCVAG00000020016	rab11al	100	90.278	ENSLOCG00000008865	rab11al	100	90.278	Lepisosteus_oculatus
ENSCVAG00000020016	rab11al	100	94.907	ENSMAMG00000010278	rab11al	100	94.907	Mastacembelus_armatus
ENSCVAG00000020016	rab11al	100	93.981	ENSMZEG00005017514	rab11al	100	93.981	Maylandia_zebra
ENSCVAG00000020016	rab11al	75	89.441	ENSMGAG00000004720	-	95	89.441	Meleagris_gallopavo
ENSCVAG00000020016	rab11al	79	95.322	ENSMMOG00000017117	rab11al	84	95.322	Mola_mola
ENSCVAG00000020016	rab11al	100	92.593	ENSMALG00000004093	rab11al	100	92.593	Monopterus_albus
ENSCVAG00000020016	rab11al	100	93.981	ENSNBRG00000005116	rab11al	100	93.981	Neolamprologus_brichardi
ENSCVAG00000020016	rab11al	100	94.444	ENSONIG00000002281	rab11al	100	94.444	Oreochromis_niloticus
ENSCVAG00000020016	rab11al	100	94.444	ENSORLG00000016126	rab11al	100	94.444	Oryzias_latipes
ENSCVAG00000020016	rab11al	100	94.444	ENSORLG00020013747	rab11al	100	94.444	Oryzias_latipes_hni
ENSCVAG00000020016	rab11al	100	94.444	ENSORLG00015019591	rab11al	100	94.444	Oryzias_latipes_hsok
ENSCVAG00000020016	rab11al	100	93.056	ENSOMEG00000020271	rab11al	100	93.056	Oryzias_melastigma
ENSCVAG00000020016	rab11al	100	88.426	ENSPKIG00000020893	rab11al	100	88.426	Paramormyrops_kingsleyae
ENSCVAG00000020016	rab11al	99	79.535	ENSPSIG00000013143	-	99	79.535	Pelodiscus_sinensis
ENSCVAG00000020016	rab11al	100	88.889	ENSPMGG00000004220	rab11al	100	88.889	Periophthalmus_magnuspinnatus
ENSCVAG00000020016	rab11al	100	97.685	ENSPFOG00000011316	rab11al	100	97.685	Poecilia_formosa
ENSCVAG00000020016	rab11al	100	97.685	ENSPLAG00000007986	rab11al	100	97.685	Poecilia_latipinna
ENSCVAG00000020016	rab11al	100	97.685	ENSPMEG00000000804	rab11al	100	97.685	Poecilia_mexicana
ENSCVAG00000020016	rab11al	100	98.148	ENSPREG00000017324	rab11al	100	98.148	Poecilia_reticulata
ENSCVAG00000020016	rab11al	100	93.981	ENSPNYG00000018244	rab11al	100	93.981	Pundamilia_nyererei
ENSCVAG00000020016	rab11al	100	90.278	ENSPNAG00000029085	rab11al	100	90.278	Pygocentrus_nattereri
ENSCVAG00000020016	rab11al	100	90.278	ENSSFOG00015008618	rab11al	100	90.278	Scleropages_formosus
ENSCVAG00000020016	rab11al	100	92.593	ENSSMAG00000016206	rab11al	100	92.593	Scophthalmus_maximus
ENSCVAG00000020016	rab11al	100	93.519	ENSSDUG00000006278	rab11al	100	93.519	Seriola_dumerili
ENSCVAG00000020016	rab11al	100	93.519	ENSSLDG00000012116	rab11al	100	93.519	Seriola_lalandi_dorsalis
ENSCVAG00000020016	rab11al	99	78.241	ENSSPUG00000002526	-	99	78.241	Sphenodon_punctatus
ENSCVAG00000020016	rab11al	100	93.056	ENSSPAG00000012044	rab11al	100	93.056	Stegastes_partitus
ENSCVAG00000020016	rab11al	94	83.663	ENSTGUG00000003680	-	99	83.663	Taeniopygia_guttata
ENSCVAG00000020016	rab11al	99	92.488	ENSTRUG00000007556	rab11al	99	92.488	Takifugu_rubripes
ENSCVAG00000020016	rab11al	100	97.685	ENSXCOG00000004226	rab11al	100	97.685	Xiphophorus_couchianus
ENSCVAG00000020016	rab11al	100	97.685	ENSXMAG00000027071	rab11al	100	97.685	Xiphophorus_maculatus