EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000020049 (Gene tree)
Gene ID: 107082331
Gene Symbol: shq1
Alias: zgc:158255
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 47063 bases
Position: chrKL652551.1:870190-917252
Accession: 107082331
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000031063	SHQ1	PF04925.15	1e-65	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000025627	-	2722	XM_015370948	ENSCVAP00000031063	582 (aa)	XP_015226434	UPI0007427CBC

Gene Model

Click here to download ENSCVAG00000020049's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000020049's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000020049	shq1	95	52.686	ENSG00000144736	SHQ1	100	74.000	Homo_sapiens
ENSCVAG00000020049	shq1	99	71.947	ENSAPOG00000000397	shq1	99	72.277	Acanthochromis_polyacanthus
ENSCVAG00000020049	shq1	92	53.069	ENSAMEG00000015140	SHQ1	76	60.641	Ailuropoda_melanoleuca
ENSCVAG00000020049	shq1	99	72.454	ENSACIG00000021249	shq1	99	72.241	Amphilophus_citrinellus
ENSCVAG00000020049	shq1	99	72.231	ENSAOCG00000023311	shq1	98	72.727	Amphiprion_ocellaris
ENSCVAG00000020049	shq1	99	72.500	ENSAPEG00000021686	shq1	98	72.667	Amphiprion_percula
ENSCVAG00000020049	shq1	99	70.117	ENSATEG00000008475	shq1	98	70.302	Anabas_testudineus
ENSCVAG00000020049	shq1	75	57.589	ENSAPLG00000013926	SHQ1	86	59.091	Anas_platyrhynchos
ENSCVAG00000020049	shq1	72	61.717	ENSACAG00000014809	SHQ1	65	62.500	Anolis_carolinensis
ENSCVAG00000020049	shq1	98	51.269	ENSANAG00000029241	SHQ1	75	60.870	Aotus_nancymaae
ENSCVAG00000020049	shq1	79	43.803	ENSANAG00000030500	-	72	45.476	Aotus_nancymaae
ENSCVAG00000020049	shq1	99	71.189	ENSACLG00000023077	shq1	99	66.933	Astatotilapia_calliptera
ENSCVAG00000020049	shq1	98	51.933	ENSBTAG00000005436	SHQ1	75	61.556	Bos_taurus
ENSCVAG00000020049	shq1	73	31.106	WBGene00021655	Y48A5A.1	97	31.279	Caenorhabditis_elegans
ENSCVAG00000020049	shq1	70	61.298	ENSCJAG00000015131	SHQ1	75	60.870	Callithrix_jacchus
ENSCVAG00000020049	shq1	95	51.664	ENSCAFG00000006434	SHQ1	75	60.412	Canis_familiaris
ENSCVAG00000020049	shq1	95	51.664	ENSCAFG00020016743	SHQ1	75	60.412	Canis_lupus_dingo
ENSCVAG00000020049	shq1	98	52.292	ENSCHIG00000012271	SHQ1	68	61.327	Capra_hircus
ENSCVAG00000020049	shq1	70	57.869	ENSTSYG00000014439	SHQ1	75	57.604	Carlito_syrichta
ENSCVAG00000020049	shq1	87	46.899	ENSCAPG00000009343	SHQ1	65	65.000	Cavia_aperea
ENSCVAG00000020049	shq1	96	51.111	ENSCPOG00000011443	SHQ1	74	60.550	Cavia_porcellus
ENSCVAG00000020049	shq1	97	40.778	ENSCCAG00000036087	-	73	47.183	Cebus_capucinus
ENSCVAG00000020049	shq1	98	45.302	ENSCCAG00000027080	SHQ1	73	52.283	Cebus_capucinus
ENSCVAG00000020049	shq1	95	52.340	ENSCATG00000041238	SHQ1	75	62.014	Cercocebus_atys
ENSCVAG00000020049	shq1	95	51.646	ENSCLAG00000004206	SHQ1	75	61.556	Chinchilla_lanigera
ENSCVAG00000020049	shq1	80	49.590	ENSCSAG00000011514	SHQ1	70	60.057	Chlorocebus_sabaeus
ENSCVAG00000020049	shq1	58	50.867	ENSCHOG00000003273	-	99	50.867	Choloepus_hoffmanni
ENSCVAG00000020049	shq1	99	48.710	ENSCPBG00000006441	SHQ1	71	60.682	Chrysemys_picta_bellii
ENSCVAG00000020049	shq1	67	44.810	ENSCING00000008013	-	95	43.448	Ciona_intestinalis
ENSCVAG00000020049	shq1	67	40.153	ENSCSAVG00000002332	-	98	39.401	Ciona_savignyi
ENSCVAG00000020049	shq1	93	52.910	ENSCANG00000039295	SHQ1	76	61.785	Colobus_angolensis_palliatus
ENSCVAG00000020049	shq1	92	52.536	ENSCGRG00001012583	Shq1	77	60.412	Cricetulus_griseus_chok1gshd
ENSCVAG00000020049	shq1	92	52.536	ENSCGRG00000009849	Shq1	77	60.412	Cricetulus_griseus_crigri
ENSCVAG00000020049	shq1	99	66.176	ENSCSEG00000007829	shq1	99	66.993	Cynoglossus_semilaevis
ENSCVAG00000020049	shq1	99	52.685	ENSDARG00000058522	shq1	73	65.893	Danio_rerio
ENSCVAG00000020049	shq1	95	52.076	ENSDNOG00000033937	SHQ1	75	60.641	Dasypus_novemcinctus
ENSCVAG00000020049	shq1	93	48.592	ENSETEG00000005766	SHQ1	76	55.149	Echinops_telfairi
ENSCVAG00000020049	shq1	64	46.438	ENSEBUG00000005445	shq1	78	47.143	Eptatretus_burgeri
ENSCVAG00000020049	shq1	94	52.289	ENSEASG00005002237	SHQ1	75	61.327	Equus_asinus_asinus
ENSCVAG00000020049	shq1	93	52.910	ENSECAG00000015673	SHQ1	74	61.785	Equus_caballus
ENSCVAG00000020049	shq1	75	60.403	ENSEEUG00000010568	SHQ1	76	61.556	Erinaceus_europaeus
ENSCVAG00000020049	shq1	98	59.191	ENSELUG00000003476	shq1	99	60.302	Esox_lucius
ENSCVAG00000020049	shq1	95	52.473	ENSFCAG00000012781	SHQ1	76	61.239	Felis_catus
ENSCVAG00000020049	shq1	99	48.276	ENSFALG00000013428	SHQ1	71	61.959	Ficedula_albicollis
ENSCVAG00000020049	shq1	76	59.382	ENSFDAG00000005595	SHQ1	67	60.641	Fukomys_damarensis
ENSCVAG00000020049	shq1	99	83.106	ENSFHEG00000017552	shq1	100	82.935	Fundulus_heteroclitus
ENSCVAG00000020049	shq1	67	72.751	ENSGMOG00000007350	shq1	100	72.634	Gadus_morhua
ENSCVAG00000020049	shq1	99	49.918	ENSGALG00000007798	SHQ1	71	61.187	Gallus_gallus
ENSCVAG00000020049	shq1	67	77.635	ENSGACG00000011797	shq1	100	78.149	Gasterosteus_aculeatus
ENSCVAG00000020049	shq1	95	51.820	ENSGGOG00000034818	SHQ1	75	60.870	Gorilla_gorilla
ENSCVAG00000020049	shq1	99	71.141	ENSHBUG00000010857	shq1	99	70.067	Haplochromis_burtoni
ENSCVAG00000020049	shq1	92	50.436	ENSHGLG00000003637	SHQ1	68	60.412	Heterocephalus_glaber_female
ENSCVAG00000020049	shq1	92	52.297	ENSHGLG00100011957	SHQ1	68	60.412	Heterocephalus_glaber_male
ENSCVAG00000020049	shq1	99	62.823	ENSHCOG00000010799	shq1	99	62.671	Hippocampus_comes
ENSCVAG00000020049	shq1	74	64.583	ENSIPUG00000001247	shq1	74	64.733	Ictalurus_punctatus
ENSCVAG00000020049	shq1	93	52.260	ENSSTOG00000010043	SHQ1	79	58.124	Ictidomys_tridecemlineatus
ENSCVAG00000020049	shq1	93	52.135	ENSJJAG00000017611	Shq1	76	62.014	Jaculus_jaculus
ENSCVAG00000020049	shq1	99	73.469	ENSKMAG00000004457	shq1	99	73.684	Kryptolebias_marmoratus
ENSCVAG00000020049	shq1	74	61.503	ENSLACG00000014243	SHQ1	66	61.048	Latimeria_chalumnae
ENSCVAG00000020049	shq1	98	54.267	ENSLOCG00000009970	shq1	76	65.831	Lepisosteus_oculatus
ENSCVAG00000020049	shq1	92	39.405	ENSMFAG00000037396	-	73	42.558	Macaca_fascicularis
ENSCVAG00000020049	shq1	95	52.513	ENSMFAG00000039148	SHQ1	75	62.014	Macaca_fascicularis
ENSCVAG00000020049	shq1	87	50.473	ENSMMUG00000009571	SHQ1	70	60.411	Macaca_mulatta
ENSCVAG00000020049	shq1	92	39.405	ENSMMUG00000021761	-	73	42.558	Macaca_mulatta
ENSCVAG00000020049	shq1	95	52.513	ENSMNEG00000032667	SHQ1	75	62.014	Macaca_nemestrina
ENSCVAG00000020049	shq1	70	62.260	ENSMLEG00000038493	SHQ1	75	61.785	Mandrillus_leucophaeus
ENSCVAG00000020049	shq1	99	71.615	ENSMAMG00000023432	shq1	95	73.246	Mastacembelus_armatus
ENSCVAG00000020049	shq1	99	71.309	ENSMZEG00005008649	shq1	99	70.805	Maylandia_zebra
ENSCVAG00000020049	shq1	99	49.839	ENSMGAG00000009640	SHQ1	72	60.364	Meleagris_gallopavo
ENSCVAG00000020049	shq1	92	52.995	ENSMAUG00000022030	Shq1	77	59.954	Mesocricetus_auratus
ENSCVAG00000020049	shq1	95	49.414	ENSMICG00000009224	SHQ1	75	59.725	Microcebus_murinus
ENSCVAG00000020049	shq1	74	60.870	ENSMOCG00000017836	Shq1	77	60.870	Microtus_ochrogaster
ENSCVAG00000020049	shq1	99	68.395	ENSMMOG00000010569	shq1	99	67.007	Mola_mola
ENSCVAG00000020049	shq1	81	54.747	ENSMODG00000003926	SHQ1	78	58.447	Monodelphis_domestica
ENSCVAG00000020049	shq1	99	73.232	ENSMALG00000008870	shq1	99	72.559	Monopterus_albus
ENSCVAG00000020049	shq1	92	51.699	MGP_CAROLIEiJ_G0028689	Shq1	76	60.412	Mus_caroli
ENSCVAG00000020049	shq1	92	52.050	ENSMUSG00000035378	Shq1	76	60.412	Mus_musculus
ENSCVAG00000020049	shq1	92	52.285	MGP_PahariEiJ_G0022440	Shq1	76	61.098	Mus_pahari
ENSCVAG00000020049	shq1	95	51.365	MGP_SPRETEiJ_G0029717	Shq1	76	60.412	Mus_spretus
ENSCVAG00000020049	shq1	95	52.014	ENSMPUG00000017006	SHQ1	94	52.708	Mustela_putorius_furo
ENSCVAG00000020049	shq1	84	49.901	ENSMLUG00000013539	SHQ1	74	58.056	Myotis_lucifugus
ENSCVAG00000020049	shq1	93	45.487	ENSNGAG00000023317	Shq1	76	53.505	Nannospalax_galili
ENSCVAG00000020049	shq1	84	68.379	ENSNBRG00000024004	shq1	98	67.850	Neolamprologus_brichardi
ENSCVAG00000020049	shq1	95	52.650	ENSNLEG00000002731	SHQ1	75	62.014	Nomascus_leucogenys
ENSCVAG00000020049	shq1	72	57.407	ENSMEUG00000009350	-	70	57.407	Notamacropus_eugenii
ENSCVAG00000020049	shq1	93	52.174	ENSODEG00000009192	SHQ1	80	60.780	Octodon_degus
ENSCVAG00000020049	shq1	99	71.357	ENSONIG00000020264	shq1	99	70.854	Oreochromis_niloticus
ENSCVAG00000020049	shq1	92	51.681	ENSOCUG00000016695	SHQ1	74	61.327	Oryctolagus_cuniculus
ENSCVAG00000020049	shq1	97	67.782	ENSORLG00000023538	shq1	97	66.549	Oryzias_latipes
ENSCVAG00000020049	shq1	99	68.000	ENSORLG00020003697	shq1	98	66.551	Oryzias_latipes_hni
ENSCVAG00000020049	shq1	99	66.957	ENSORLG00015021040	shq1	98	66.087	Oryzias_latipes_hsok
ENSCVAG00000020049	shq1	96	69.395	ENSOMEG00000001225	shq1	92	71.483	Oryzias_melastigma
ENSCVAG00000020049	shq1	81	56.008	ENSOGAG00000003898	SHQ1	77	60.227	Otolemur_garnettii
ENSCVAG00000020049	shq1	98	50.676	ENSOARG00000009547	SHQ1	75	60.544	Ovis_aries
ENSCVAG00000020049	shq1	95	52.860	ENSPPAG00000027714	SHQ1	75	62.014	Pan_paniscus
ENSCVAG00000020049	shq1	95	39.199	ENSPPAG00000043263	-	73	44.573	Pan_paniscus
ENSCVAG00000020049	shq1	95	51.304	ENSPPRG00000004769	SHQ1	75	61.239	Panthera_pardus
ENSCVAG00000020049	shq1	95	49.298	ENSPTIG00000011478	SHQ1	74	58.701	Panthera_tigris_altaica
ENSCVAG00000020049	shq1	95	39.373	ENSPTRG00000048303	-	73	44.342	Pan_troglodytes
ENSCVAG00000020049	shq1	95	52.860	ENSPTRG00000015106	SHQ1	75	62.014	Pan_troglodytes
ENSCVAG00000020049	shq1	95	52.340	ENSPANG00000002881	SHQ1	75	62.014	Papio_anubis
ENSCVAG00000020049	shq1	99	56.529	ENSPKIG00000021517	shq1	76	65.904	Paramormyrops_kingsleyae
ENSCVAG00000020049	shq1	92	53.321	ENSPSIG00000005536	SHQ1	72	61.678	Pelodiscus_sinensis
ENSCVAG00000020049	shq1	98	59.727	ENSPMGG00000008838	shq1	98	59.829	Periophthalmus_magnuspinnatus
ENSCVAG00000020049	shq1	70	60.577	ENSPEMG00000000251	Shq1	76	60.183	Peromyscus_maniculatus_bairdii
ENSCVAG00000020049	shq1	74	56.463	ENSPMAG00000005372	shq1	98	56.916	Petromyzon_marinus
ENSCVAG00000020049	shq1	93	79.304	ENSPFOG00000003118	shq1	97	78.771	Poecilia_formosa
ENSCVAG00000020049	shq1	78	77.363	ENSPMEG00000011076	shq1	96	76.682	Poecilia_mexicana
ENSCVAG00000020049	shq1	85	77.576	ENSPREG00000000591	shq1	92	77.096	Poecilia_reticulata
ENSCVAG00000020049	shq1	95	52.340	ENSPPYG00000013717	SHQ1	75	62.014	Pongo_abelii
ENSCVAG00000020049	shq1	92	54.025	ENSPCAG00000009035	SHQ1	76	62.243	Procavia_capensis
ENSCVAG00000020049	shq1	70	58.993	ENSPCOG00000008415	SHQ1	75	60.592	Propithecus_coquereli
ENSCVAG00000020049	shq1	93	52.900	ENSPVAG00000017392	SHQ1	76	61.556	Pteropus_vampyrus
ENSCVAG00000020049	shq1	99	71.189	ENSPNYG00000003878	shq1	99	70.184	Pundamilia_nyererei
ENSCVAG00000020049	shq1	98	55.868	ENSPNAG00000026840	shq1	71	67.667	Pygocentrus_nattereri
ENSCVAG00000020049	shq1	93	48.911	ENSRNOG00000005433	Shq1	77	58.190	Rattus_norvegicus
ENSCVAG00000020049	shq1	93	51.699	ENSRBIG00000026280	SHQ1	75	60.373	Rhinopithecus_bieti
ENSCVAG00000020049	shq1	93	53.263	ENSRROG00000034126	SHQ1	76	62.243	Rhinopithecus_roxellana
ENSCVAG00000020049	shq1	70	54.327	ENSSBOG00000021038	SHQ1	73	54.462	Saimiri_boliviensis_boliviensis
ENSCVAG00000020049	shq1	83	55.263	ENSSHAG00000015077	SHQ1	78	59.410	Sarcophilus_harrisii
ENSCVAG00000020049	shq1	99	56.559	ENSSFOG00015016241	shq1	78	68.224	Scleropages_formosus
ENSCVAG00000020049	shq1	99	72.093	ENSSMAG00000016151	shq1	99	71.906	Scophthalmus_maximus
ENSCVAG00000020049	shq1	99	71.947	ENSSDUG00000011986	shq1	99	71.005	Seriola_dumerili
ENSCVAG00000020049	shq1	99	71.144	ENSSLDG00000013908	shq1	99	70.364	Seriola_lalandi_dorsalis
ENSCVAG00000020049	shq1	92	45.946	ENSSARG00000007119	SHQ1	77	51.264	Sorex_araneus
ENSCVAG00000020049	shq1	77	49.679	ENSSPUG00000011526	-	87	50.215	Sphenodon_punctatus
ENSCVAG00000020049	shq1	94	50.769	ENSSSCG00000011518	SHQ1	79	59.957	Sus_scrofa
ENSCVAG00000020049	shq1	70	62.530	ENSTGUG00000009933	SHQ1	76	61.678	Taeniopygia_guttata
ENSCVAG00000020049	shq1	99	65.299	ENSTRUG00000009446	shq1	99	64.444	Takifugu_rubripes
ENSCVAG00000020049	shq1	73	69.626	ENSTNIG00000007354	shq1	96	69.284	Tetraodon_nigroviridis
ENSCVAG00000020049	shq1	61	72.340	ENSTBEG00000011295	SHQ1	55	72.340	Tupaia_belangeri
ENSCVAG00000020049	shq1	98	51.695	ENSTTRG00000005320	SHQ1	75	60.412	Tursiops_truncatus
ENSCVAG00000020049	shq1	92	52.564	ENSUMAG00000024031	SHQ1	74	61.215	Ursus_maritimus
ENSCVAG00000020049	shq1	87	44.762	ENSVPAG00000004880	SHQ1	73	52.699	Vicugna_pacos
ENSCVAG00000020049	shq1	95	51.313	ENSVVUG00000013906	SHQ1	75	60.412	Vulpes_vulpes
ENSCVAG00000020049	shq1	99	51.236	ENSXETG00000032215	shq1	71	62.069	Xenopus_tropicalis