EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000020081 (Gene tree)
Gene ID: 107082885
Gene Symbol: p4ha1a
Alias: si:ch211-146f4.5
Full Name: prolyl 4-hydroxylase subunit alpha-1-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 9372 bases
Position: chrKL652565.1:1053188-1062559
Accession: 107082885
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000031047	2OG-FeII_Oxy	PF03171.20	2.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000025558	-	2564	-	ENSCVAP00000031053	558 (aa)	-	-
ENSCVAT00000025532	-	2498	XM_015371781	ENSCVAP00000031047	536 (aa)	XP_015227267	UPI000742C64B

Gene Model

Click here to download ENSCVAG00000020081's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000020081's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000020081	p4ha1a	99	61.869	ENSCVAG00000000703	p4ha2	99	61.869
ENSCVAG00000020081	p4ha1a	99	69.501	ENSCVAG00000016433	p4ha1b	98	70.425

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000020081	p4ha1a	82	61.538	ENSAPOG00000008101	p4ha1a	91	61.538	Acanthochromis_polyacanthus
ENSCVAG00000020081	p4ha1a	97	77.395	ENSACIG00000014303	p4ha1a	99	76.371	Amphilophus_citrinellus
ENSCVAG00000020081	p4ha1a	100	82.276	ENSAOCG00000005514	-	100	82.276	Amphiprion_ocellaris
ENSCVAG00000020081	p4ha1a	100	71.082	ENSAOCG00000005531	p4ha1a	100	71.082	Amphiprion_ocellaris
ENSCVAG00000020081	p4ha1a	100	81.716	ENSAPEG00000010462	-	100	81.716	Amphiprion_percula
ENSCVAG00000020081	p4ha1a	99	72.128	ENSAMXG00000018364	p4ha1a	99	72.128	Astyanax_mexicanus
ENSCVAG00000020081	p4ha1a	96	77.519	ENSCSEG00000001857	-	97	79.322	Cynoglossus_semilaevis
ENSCVAG00000020081	p4ha1a	99	72.097	ENSDARG00000033537	p4ha1a	99	72.097	Danio_rerio
ENSCVAG00000020081	p4ha1a	98	74.440	ENSELUG00000005174	p4ha1a	98	74.440	Esox_lucius
ENSCVAG00000020081	p4ha1a	100	81.599	ENSMAMG00000010119	p4ha1a	100	81.599	Mastacembelus_armatus
ENSCVAG00000020081	p4ha1a	99	77.358	ENSMMOG00000009210	-	98	77.358	Mola_mola
ENSCVAG00000020081	p4ha1a	100	76.852	ENSMALG00000013083	-	99	80.602	Monopterus_albus
ENSCVAG00000020081	p4ha1a	99	72.097	ENSORLG00000014906	-	94	72.097	Oryzias_latipes
ENSCVAG00000020081	p4ha1a	99	75.000	ENSORLG00020015227	-	97	75.000	Oryzias_latipes_hni
ENSCVAG00000020081	p4ha1a	99	75.187	ENSORLG00015012970	-	97	75.187	Oryzias_latipes_hsok
ENSCVAG00000020081	p4ha1a	99	76.548	ENSOMEG00000019702	-	99	76.548	Oryzias_melastigma
ENSCVAG00000020081	p4ha1a	98	73.684	ENSPKIG00000002519	p4ha1a	98	73.684	Paramormyrops_kingsleyae
ENSCVAG00000020081	p4ha1a	99	86.456	ENSPREG00000016136	p4ha1a	99	86.642	Poecilia_reticulata
ENSCVAG00000020081	p4ha1a	98	73.684	ENSPNAG00000025732	p4ha1a	98	73.872	Pygocentrus_nattereri
ENSCVAG00000020081	p4ha1a	95	74.806	ENSSFOG00015009731	p4ha1	98	73.872	Scleropages_formosus
ENSCVAG00000020081	p4ha1a	98	75.047	ENSTNIG00000003570	-	98	75.047	Tetraodon_nigroviridis