EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000020083 (Gene tree)
Gene ID: 107092507
Gene Symbol: srsf7a
Alias: fb39b02|wu:fb39b02|zgc:77155
Full Name: serine/arginine-rich splicing factor 7-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 5520 bases
Position: chrKL652883.1:175740-181259
Accession: 107092507
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000017056	RRM_1	PF00076.22	2.9e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000032151	-	1052	XM_015387024	ENSCVAP00000017056	259 (aa)	XP_015242510	UPI0007428C4F

Gene Model

Click here to download ENSCVAG00000020083's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000020083's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000020083	srsf7a	54	56.338	ENSCVAG00000009865	-	56	75.294

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000020083	srsf7a	58	54.305	ENSACIG00000016419	-	56	75.294	Amphilophus_citrinellus
ENSCVAG00000020083	srsf7a	69	69.061	ENSAMXG00000031648	-	52	80.952	Astyanax_mexicanus
ENSCVAG00000020083	srsf7a	83	57.083	ENSAMXG00000007005	srsf7b	54	75.221	Astyanax_mexicanus
ENSCVAG00000020083	srsf7a	75	70.408	ENSAMXG00000001532	srsf7a	55	77.612	Astyanax_mexicanus
ENSCVAG00000020083	srsf7a	63	51.515	ENSCSAG00000010291	SRSF3	52	75.294	Chlorocebus_sabaeus
ENSCVAG00000020083	srsf7a	60	51.250	ENSCSAVG00000007369	-	68	51.639	Ciona_savignyi
ENSCVAG00000020083	srsf7a	51	91.729	ENSCSEG00000006378	srsf7a	79	95.495	Cynoglossus_semilaevis
ENSCVAG00000020083	srsf7a	80	69.712	ENSDARG00000035325	srsf7a	85	91.935	Danio_rerio
ENSCVAG00000020083	srsf7a	56	67.568	ENSDARG00000101057	srsf7b	73	75.676	Danio_rerio
ENSCVAG00000020083	srsf7a	59	53.704	ENSEBUG00000002677	-	56	66.279	Eptatretus_burgeri
ENSCVAG00000020083	srsf7a	79	64.455	ENSELUG00000018155	srsf7b	80	76.577	Esox_lucius
ENSCVAG00000020083	srsf7a	86	80.531	ENSGMOG00000002004	srsf7a	53	91.057	Gadus_morhua
ENSCVAG00000020083	srsf7a	60	50.955	ENSGMOG00000008043	SRSF3	92	49.677	Gadus_morhua
ENSCVAG00000020083	srsf7a	100	92.664	ENSGAFG00000002177	srsf7a	51	96.748	Gambusia_affinis
ENSCVAG00000020083	srsf7a	58	51.974	ENSHCOG00000017795	-	51	71.765	Hippocampus_comes
ENSCVAG00000020083	srsf7a	72	68.449	ENSIPUG00000007928	-	53	81.746	Ictalurus_punctatus
ENSCVAG00000020083	srsf7a	53	56.429	ENSJJAG00000020230	-	68	61.261	Jaculus_jaculus
ENSCVAG00000020083	srsf7a	66	69.364	ENSLACG00000018688	srsf7a	60	85.484	Latimeria_chalumnae
ENSCVAG00000020083	srsf7a	54	71.831	ENSLOCG00000015778	srsf7b	58	73.571	Lepisosteus_oculatus
ENSCVAG00000020083	srsf7a	67	45.714	ENSMAUG00000011430	-	54	61.446	Mesocricetus_auratus
ENSCVAG00000020083	srsf7a	57	52.349	ENSMAUG00000021932	-	54	62.385	Mesocricetus_auratus
ENSCVAG00000020083	srsf7a	59	50.327	ENSMOCG00000014206	-	53	78.205	Microtus_ochrogaster
ENSCVAG00000020083	srsf7a	95	84.211	ENSMALG00000012722	srsf7a	51	95.935	Monopterus_albus
ENSCVAG00000020083	srsf7a	63	95.706	ENSNBRG00000006601	srsf7a	80	96.748	Neolamprologus_brichardi
ENSCVAG00000020083	srsf7a	55	68.750	ENSPKIG00000017425	srsf7b	63	78.378	Paramormyrops_kingsleyae
ENSCVAG00000020083	srsf7a	100	95.753	ENSPFOG00000017803	srsf7a	100	95.753	Poecilia_formosa
ENSCVAG00000020083	srsf7a	100	95.753	ENSPMEG00000002757	srsf7a	100	95.753	Poecilia_mexicana
ENSCVAG00000020083	srsf7a	56	61.905	ENSPCOG00000023721	-	69	68.468	Propithecus_coquereli
ENSCVAG00000020083	srsf7a	68	69.886	ENSPNAG00000000149	-	52	81.746	Pygocentrus_nattereri
ENSCVAG00000020083	srsf7a	54	68.794	ENSSPAG00000017204	srsf7b	79	76.577	Stegastes_partitus
ENSCVAG00000020083	srsf7a	51	88.550	ENSSPAG00000022192	srsf7a	89	96.396	Stegastes_partitus
ENSCVAG00000020083	srsf7a	59	53.846	ENSTRUG00000023965	-	75	72.340	Takifugu_rubripes
ENSCVAG00000020083	srsf7a	95	84.211	ENSTRUG00000010529	srsf7a	51	92.683	Takifugu_rubripes
ENSCVAG00000020083	srsf7a	56	52.667	ENSVVUG00000006092	-	69	63.889	Vulpes_vulpes
ENSCVAG00000020083	srsf7a	100	95.367	ENSXMAG00000003050	srsf7a	100	95.367	Xiphophorus_maculatus