EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000020099 (Gene tree)
Gene ID: 107095889
Gene Symbol: si:dkey-86e18.1
Alias: im:6912651
Full Name: uncharacterized LOC107095889
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 12077 bases
Position: chrKL653082.1:522862-534938
Accession: 107095889
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000017070	Isy1	PF06246.12	8.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000025730	-	1189	-	ENSCVAP00000031087	352 (aa)	-	-
ENSCVAT00000025615	-	1100	XM_015392256	ENSCVAP00000017070	306 (aa)	XP_015247742	UPI000742A751

Gene Model

Click here to download ENSCVAG00000020099's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000020099's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000020099	si:dkey-86e18.1	99	61.146	ENSAPOG00000002792	si:dkey-86e18.1	99	61.146	Acanthochromis_polyacanthus
ENSCVAG00000020099	si:dkey-86e18.1	99	57.705	ENSACIG00000007867	si:dkey-86e18.1	100	57.705	Amphilophus_citrinellus
ENSCVAG00000020099	si:dkey-86e18.1	99	57.895	ENSAOCG00000014440	si:dkey-86e18.1	99	57.895	Amphiprion_ocellaris
ENSCVAG00000020099	si:dkey-86e18.1	99	60.518	ENSAPEG00000011831	si:dkey-86e18.1	99	60.518	Amphiprion_percula
ENSCVAG00000020099	si:dkey-86e18.1	99	59.477	ENSATEG00000018061	si:dkey-86e18.1	100	59.477	Anabas_testudineus
ENSCVAG00000020099	si:dkey-86e18.1	97	56.766	ENSACLG00000012308	si:dkey-86e18.1	100	56.731	Astatotilapia_calliptera
ENSCVAG00000020099	si:dkey-86e18.1	99	49.515	ENSAMXG00000038638	si:dkey-86e18.1	99	49.515	Astyanax_mexicanus
ENSCVAG00000020099	si:dkey-86e18.1	99	50.161	ENSCSEG00000007482	-	99	50.161	Cynoglossus_semilaevis
ENSCVAG00000020099	si:dkey-86e18.1	99	46.906	ENSDARG00000043536	si:dkey-86e18.1	99	46.906	Danio_rerio
ENSCVAG00000020099	si:dkey-86e18.1	99	46.526	ENSELUG00000007229	si:dkey-86e18.1	100	46.526	Esox_lucius
ENSCVAG00000020099	si:dkey-86e18.1	99	71.429	ENSFHEG00000023250	si:dkey-86e18.1	99	71.429	Fundulus_heteroclitus
ENSCVAG00000020099	si:dkey-86e18.1	77	76.271	ENSGAFG00000006609	si:dkey-86e18.1	78	76.271	Gambusia_affinis
ENSCVAG00000020099	si:dkey-86e18.1	97	57.426	ENSHBUG00000018237	si:dkey-86e18.1	100	57.372	Haplochromis_burtoni
ENSCVAG00000020099	si:dkey-86e18.1	99	45.484	ENSIPUG00000012213	si:dkey-86e18.1	100	45.484	Ictalurus_punctatus
ENSCVAG00000020099	si:dkey-86e18.1	99	63.961	ENSKMAG00000008387	si:dkey-86e18.1	99	63.961	Kryptolebias_marmoratus
ENSCVAG00000020099	si:dkey-86e18.1	97	49.832	ENSLBEG00000008055	si:dkey-86e18.1	98	51.155	Labrus_bergylta
ENSCVAG00000020099	si:dkey-86e18.1	99	37.771	ENSLACG00000003926	si:dkey-86e18.1	100	37.771	Latimeria_chalumnae
ENSCVAG00000020099	si:dkey-86e18.1	99	45.955	ENSLOCG00000008902	si:dkey-86e18.1	100	45.955	Lepisosteus_oculatus
ENSCVAG00000020099	si:dkey-86e18.1	99	60.759	ENSMAMG00000016989	si:dkey-86e18.1	100	60.759	Mastacembelus_armatus
ENSCVAG00000020099	si:dkey-86e18.1	97	56.766	ENSMZEG00005019446	si:dkey-86e18.1	100	56.731	Maylandia_zebra
ENSCVAG00000020099	si:dkey-86e18.1	99	53.770	ENSMMOG00000002257	si:dkey-86e18.1	100	53.770	Mola_mola
ENSCVAG00000020099	si:dkey-86e18.1	99	57.994	ENSMALG00000004349	si:dkey-86e18.1	100	54.754	Monopterus_albus
ENSCVAG00000020099	si:dkey-86e18.1	97	52.805	ENSNBRG00000023611	si:dkey-86e18.1	100	52.885	Neolamprologus_brichardi
ENSCVAG00000020099	si:dkey-86e18.1	97	58.054	ENSONIG00000002738	si:dkey-86e18.1	100	57.980	Oreochromis_niloticus
ENSCVAG00000020099	si:dkey-86e18.1	99	56.410	ENSORLG00000028970	si:dkey-86e18.1	100	56.410	Oryzias_latipes
ENSCVAG00000020099	si:dkey-86e18.1	99	55.128	ENSORLG00020021835	si:dkey-86e18.1	100	55.128	Oryzias_latipes_hni
ENSCVAG00000020099	si:dkey-86e18.1	99	57.188	ENSORLG00015018600	si:dkey-86e18.1	100	57.188	Oryzias_latipes_hsok
ENSCVAG00000020099	si:dkey-86e18.1	99	55.663	ENSOMEG00000001778	si:dkey-86e18.1	100	55.663	Oryzias_melastigma
ENSCVAG00000020099	si:dkey-86e18.1	99	40.717	ENSPKIG00000009550	si:dkey-86e18.1	100	42.105	Paramormyrops_kingsleyae
ENSCVAG00000020099	si:dkey-86e18.1	99	48.197	ENSPMGG00000008481	si:dkey-86e18.1	99	48.197	Periophthalmus_magnuspinnatus
ENSCVAG00000020099	si:dkey-86e18.1	99	70.227	ENSPFOG00000014484	si:dkey-86e18.1	100	70.227	Poecilia_formosa
ENSCVAG00000020099	si:dkey-86e18.1	99	70.227	ENSPLAG00000009910	si:dkey-86e18.1	100	70.227	Poecilia_latipinna
ENSCVAG00000020099	si:dkey-86e18.1	99	70.227	ENSPMEG00000003114	si:dkey-86e18.1	100	70.227	Poecilia_mexicana
ENSCVAG00000020099	si:dkey-86e18.1	99	61.639	ENSPREG00000002081	si:dkey-86e18.1	100	61.639	Poecilia_reticulata
ENSCVAG00000020099	si:dkey-86e18.1	97	56.106	ENSPNYG00000007473	si:dkey-86e18.1	100	56.090	Pundamilia_nyererei
ENSCVAG00000020099	si:dkey-86e18.1	99	49.671	ENSPNAG00000008048	si:dkey-86e18.1	100	49.671	Pygocentrus_nattereri
ENSCVAG00000020099	si:dkey-86e18.1	99	45.016	ENSSFOG00015002284	si:dkey-86e18.1	100	45.016	Scleropages_formosus
ENSCVAG00000020099	si:dkey-86e18.1	96	57.377	ENSSMAG00000017672	si:dkey-86e18.1	99	57.278	Scophthalmus_maximus
ENSCVAG00000020099	si:dkey-86e18.1	99	59.375	ENSSDUG00000000818	si:dkey-86e18.1	100	59.375	Seriola_dumerili
ENSCVAG00000020099	si:dkey-86e18.1	99	57.944	ENSSLDG00000000289	si:dkey-86e18.1	100	57.944	Seriola_lalandi_dorsalis
ENSCVAG00000020099	si:dkey-86e18.1	99	62.136	ENSSPAG00000014712	si:dkey-86e18.1	100	62.136	Stegastes_partitus
ENSCVAG00000020099	si:dkey-86e18.1	99	51.961	ENSTRUG00000024468	si:dkey-86e18.1	100	53.094	Takifugu_rubripes
ENSCVAG00000020099	si:dkey-86e18.1	99	59.016	ENSXCOG00000008851	si:dkey-86e18.1	100	59.016	Xiphophorus_couchianus
ENSCVAG00000020099	si:dkey-86e18.1	99	70.130	ENSXMAG00000011403	si:dkey-86e18.1	100	70.130	Xiphophorus_maculatus