EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000020101 (Gene tree)
Gene ID: 107085664
Gene Symbol: clp1
Alias: fa28a12|wu:fa28a12
Full Name: cleavage and polyadenylation factor I subunit 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 2609 bases
Position: chrKL652630.1:1432813-1435421
Accession: 107085664
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000031081	Clp1	PF06807.14	2.2e-30	1	1
ENSCVAP00000017051	Clp1	PF06807.14	2.4e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000025599	-	1251	-	ENSCVAP00000031081	416 (aa)	-	-
ENSCVAT00000025620	-	1581	XM_015376137	ENSCVAP00000017051	441 (aa)	XP_015231623	UPI0007427F6B

Gene Model

Click here to download ENSCVAG00000020101's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000020101's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000020101	clp1	99	75.632	ENSG00000172409	CLP1	99	76.102	Homo_sapiens
ENSCVAG00000020101	clp1	100	94.104	ENSAPOG00000008242	clp1	100	94.104	Acanthochromis_polyacanthus
ENSCVAG00000020101	clp1	99	75.402	ENSAMEG00000014551	CLP1	99	75.402	Ailuropoda_melanoleuca
ENSCVAG00000020101	clp1	100	94.104	ENSACIG00000006310	clp1	99	94.104	Amphilophus_citrinellus
ENSCVAG00000020101	clp1	100	94.331	ENSAOCG00000010681	clp1	100	94.331	Amphiprion_ocellaris
ENSCVAG00000020101	clp1	100	94.331	ENSAPEG00000012165	clp1	100	94.331	Amphiprion_percula
ENSCVAG00000020101	clp1	100	95.011	ENSATEG00000012374	clp1	100	95.011	Anabas_testudineus
ENSCVAG00000020101	clp1	98	75.926	ENSACAG00000007139	CLP1	99	75.926	Anolis_carolinensis
ENSCVAG00000020101	clp1	99	75.632	ENSANAG00000034935	CLP1	99	76.102	Aotus_nancymaae
ENSCVAG00000020101	clp1	100	93.878	ENSACLG00000013573	clp1	100	93.878	Astatotilapia_calliptera
ENSCVAG00000020101	clp1	95	86.792	ENSAMXG00000014194	clp1	98	86.792	Astyanax_mexicanus
ENSCVAG00000020101	clp1	98	75.638	ENSBTAG00000006493	CLP1	99	75.638	Bos_taurus
ENSCVAG00000020101	clp1	95	47.281	WBGene00010304	clpf-1	97	47.281	Caenorhabditis_elegans
ENSCVAG00000020101	clp1	99	75.632	ENSCJAG00000008748	CLP1	99	76.102	Callithrix_jacchus
ENSCVAG00000020101	clp1	98	75.638	ENSCAFG00000007815	CLP1	99	75.638	Canis_familiaris
ENSCVAG00000020101	clp1	98	75.638	ENSCAFG00020000903	CLP1	99	75.638	Canis_lupus_dingo
ENSCVAG00000020101	clp1	98	76.102	ENSCHIG00000023497	CLP1	99	76.102	Capra_hircus
ENSCVAG00000020101	clp1	99	75.632	ENSTSYG00000006824	CLP1	99	75.632	Carlito_syrichta
ENSCVAG00000020101	clp1	99	75.402	ENSCAPG00000009703	CLP1	99	75.402	Cavia_aperea
ENSCVAG00000020101	clp1	96	76.651	ENSCPOG00000012554	CLP1	99	76.651	Cavia_porcellus
ENSCVAG00000020101	clp1	98	75.638	ENSCCAG00000031957	CLP1	99	75.638	Cebus_capucinus
ENSCVAG00000020101	clp1	100	74.603	ENSCATG00000044628	CLP1	99	76.102	Cercocebus_atys
ENSCVAG00000020101	clp1	98	75.870	ENSCLAG00000004094	CLP1	99	75.870	Chinchilla_lanigera
ENSCVAG00000020101	clp1	98	76.102	ENSCSAG00000005994	CLP1	99	76.102	Chlorocebus_sabaeus
ENSCVAG00000020101	clp1	98	75.463	ENSCPBG00000016843	CLP1	99	75.463	Chrysemys_picta_bellii
ENSCVAG00000020101	clp1	96	62.175	ENSCING00000003779	-	97	62.175	Ciona_intestinalis
ENSCVAG00000020101	clp1	98	61.717	ENSCSAVG00000003437	-	99	61.717	Ciona_savignyi
ENSCVAG00000020101	clp1	99	75.632	ENSCANG00000034335	CLP1	99	76.102	Colobus_angolensis_palliatus
ENSCVAG00000020101	clp1	98	75.231	ENSCGRG00001002227	CLP1	99	75.231	Cricetulus_griseus_chok1gshd
ENSCVAG00000020101	clp1	98	75.231	ENSCGRG00000004328	CLP1	99	75.231	Cricetulus_griseus_crigri
ENSCVAG00000020101	clp1	100	90.930	ENSCSEG00000008614	clp1	100	90.930	Cynoglossus_semilaevis
ENSCVAG00000020101	clp1	100	84.081	ENSDARG00000063663	clp1	100	84.305	Danio_rerio
ENSCVAG00000020101	clp1	98	75.289	ENSDNOG00000042415	CLP1	90	75.289	Dasypus_novemcinctus
ENSCVAG00000020101	clp1	98	75.406	ENSDORG00000014685	Clp1	99	75.406	Dipodomys_ordii
ENSCVAG00000020101	clp1	95	53.349	FBgn0033842	cbc	97	53.349	Drosophila_melanogaster
ENSCVAG00000020101	clp1	98	75.870	ENSETEG00000003009	CLP1	99	75.870	Echinops_telfairi
ENSCVAG00000020101	clp1	98	64.965	ENSEBUG00000011648	clp1	99	64.965	Eptatretus_burgeri
ENSCVAG00000020101	clp1	98	76.102	ENSEASG00005002093	CLP1	99	76.102	Equus_asinus_asinus
ENSCVAG00000020101	clp1	99	75.862	ENSECAG00000011597	CLP1	99	76.102	Equus_caballus
ENSCVAG00000020101	clp1	98	75.174	ENSEEUG00000012771	CLP1	99	75.174	Erinaceus_europaeus
ENSCVAG00000020101	clp1	100	85.874	ENSELUG00000024048	clp1	100	85.874	Esox_lucius
ENSCVAG00000020101	clp1	99	75.402	ENSFCAG00000006633	CLP1	99	75.638	Felis_catus
ENSCVAG00000020101	clp1	98	75.926	ENSFALG00000011145	CLP1	99	75.926	Ficedula_albicollis
ENSCVAG00000020101	clp1	98	75.870	ENSFDAG00000000234	CLP1	99	75.870	Fukomys_damarensis
ENSCVAG00000020101	clp1	100	97.732	ENSFHEG00000014760	CLP1	100	97.732	Fundulus_heteroclitus
ENSCVAG00000020101	clp1	100	87.075	ENSGMOG00000019340	clp1	100	87.075	Gadus_morhua
ENSCVAG00000020101	clp1	98	75.694	ENSGALG00000007370	CLP1	99	75.694	Gallus_gallus
ENSCVAG00000020101	clp1	100	97.052	ENSGAFG00000003020	clp1	100	97.052	Gambusia_affinis
ENSCVAG00000020101	clp1	100	93.197	ENSGACG00000017832	clp1	100	93.197	Gasterosteus_aculeatus
ENSCVAG00000020101	clp1	98	75.463	ENSGAGG00000013279	CLP1	99	75.463	Gopherus_agassizii
ENSCVAG00000020101	clp1	99	75.632	ENSGGOG00000023006	CLP1	99	76.102	Gorilla_gorilla
ENSCVAG00000020101	clp1	100	94.104	ENSHBUG00000010436	clp1	100	94.104	Haplochromis_burtoni
ENSCVAG00000020101	clp1	98	75.870	ENSHGLG00000009914	CLP1	99	75.870	Heterocephalus_glaber_female
ENSCVAG00000020101	clp1	98	75.870	ENSHGLG00100006105	CLP1	99	75.870	Heterocephalus_glaber_male
ENSCVAG00000020101	clp1	100	93.651	ENSHCOG00000010072	clp1	100	93.651	Hippocampus_comes
ENSCVAG00000020101	clp1	100	83.964	ENSIPUG00000016238	clp1	99	83.964	Ictalurus_punctatus
ENSCVAG00000020101	clp1	98	75.870	ENSSTOG00000029257	CLP1	99	75.870	Ictidomys_tridecemlineatus
ENSCVAG00000020101	clp1	98	75.406	ENSJJAG00000023691	Clp1	99	75.406	Jaculus_jaculus
ENSCVAG00000020101	clp1	100	95.465	ENSKMAG00000011990	clp1	100	95.465	Kryptolebias_marmoratus
ENSCVAG00000020101	clp1	100	94.104	ENSLBEG00000010201	clp1	100	94.104	Labrus_bergylta
ENSCVAG00000020101	clp1	97	75.822	ENSLACG00000003160	CLP1	99	75.822	Latimeria_chalumnae
ENSCVAG00000020101	clp1	76	86.646	ENSLOCG00000008074	clp1	100	86.646	Lepisosteus_oculatus
ENSCVAG00000020101	clp1	98	75.638	ENSLAFG00000014907	CLP1	99	75.638	Loxodonta_africana
ENSCVAG00000020101	clp1	99	75.632	ENSMFAG00000046074	CLP1	99	76.102	Macaca_fascicularis
ENSCVAG00000020101	clp1	99	75.632	ENSMMUG00000038007	CLP1	99	75.632	Macaca_mulatta
ENSCVAG00000020101	clp1	98	76.102	ENSMNEG00000000259	CLP1	99	76.102	Macaca_nemestrina
ENSCVAG00000020101	clp1	99	75.632	ENSMLEG00000043556	CLP1	99	76.102	Mandrillus_leucophaeus
ENSCVAG00000020101	clp1	100	95.238	ENSMAMG00000002149	clp1	100	95.238	Mastacembelus_armatus
ENSCVAG00000020101	clp1	100	93.878	ENSMZEG00005002850	clp1	100	93.878	Maylandia_zebra
ENSCVAG00000020101	clp1	98	75.694	ENSMGAG00000009643	CLP1	99	75.694	Meleagris_gallopavo
ENSCVAG00000020101	clp1	98	74.769	ENSMAUG00000016261	Clp1	99	74.769	Mesocricetus_auratus
ENSCVAG00000020101	clp1	99	75.402	ENSMICG00000004895	CLP1	99	75.638	Microcebus_murinus
ENSCVAG00000020101	clp1	98	75.463	ENSMOCG00000005498	Clp1	99	75.463	Microtus_ochrogaster
ENSCVAG00000020101	clp1	100	91.837	ENSMMOG00000003229	clp1	100	91.837	Mola_mola
ENSCVAG00000020101	clp1	98	75.463	ENSMODG00000020107	-	99	75.463	Monodelphis_domestica
ENSCVAG00000020101	clp1	98	75.463	ENSMODG00000024148	-	99	75.463	Monodelphis_domestica
ENSCVAG00000020101	clp1	100	95.238	ENSMALG00000014239	clp1	100	95.238	Monopterus_albus
ENSCVAG00000020101	clp1	98	75.231	MGP_CAROLIEiJ_G0023726	Clp1	99	75.231	Mus_caroli
ENSCVAG00000020101	clp1	98	75.231	ENSMUSG00000027079	Clp1	99	75.231	Mus_musculus
ENSCVAG00000020101	clp1	98	75.000	MGP_PahariEiJ_G0025177	Clp1	99	75.000	Mus_pahari
ENSCVAG00000020101	clp1	98	75.231	MGP_SPRETEiJ_G0024646	Clp1	99	75.231	Mus_spretus
ENSCVAG00000020101	clp1	98	75.638	ENSMPUG00000000268	CLP1	99	75.638	Mustela_putorius_furo
ENSCVAG00000020101	clp1	98	75.870	ENSMLUG00000007904	CLP1	99	75.870	Myotis_lucifugus
ENSCVAG00000020101	clp1	98	75.406	ENSNGAG00000006165	Clp1	99	75.406	Nannospalax_galili
ENSCVAG00000020101	clp1	100	94.104	ENSNBRG00000005225	clp1	100	94.104	Neolamprologus_brichardi
ENSCVAG00000020101	clp1	80	70.103	ENSNLEG00000012809	-	99	70.103	Nomascus_leucogenys
ENSCVAG00000020101	clp1	98	75.346	ENSMEUG00000010949	CLP1	100	75.346	Notamacropus_eugenii
ENSCVAG00000020101	clp1	73	76.898	ENSOPRG00000007329	CLP1	100	76.898	Ochotona_princeps
ENSCVAG00000020101	clp1	98	75.870	ENSODEG00000011410	CLP1	99	75.870	Octodon_degus
ENSCVAG00000020101	clp1	100	93.878	ENSONIG00000005089	clp1	100	93.878	Oreochromis_niloticus
ENSCVAG00000020101	clp1	98	75.638	ENSOCUG00000007045	CLP1	99	75.638	Oryctolagus_cuniculus
ENSCVAG00000020101	clp1	100	93.878	ENSORLG00000003647	clp1	100	93.878	Oryzias_latipes
ENSCVAG00000020101	clp1	100	93.651	ENSORLG00020016676	clp1	100	93.651	Oryzias_latipes_hni
ENSCVAG00000020101	clp1	100	93.878	ENSORLG00015019484	clp1	100	93.878	Oryzias_latipes_hsok
ENSCVAG00000020101	clp1	100	93.651	ENSOMEG00000021303	clp1	100	93.651	Oryzias_melastigma
ENSCVAG00000020101	clp1	98	75.638	ENSOGAG00000004508	CLP1	99	75.638	Otolemur_garnettii
ENSCVAG00000020101	clp1	98	74.885	ENSOARG00000010145	CLP1	99	74.885	Ovis_aries
ENSCVAG00000020101	clp1	99	75.632	ENSPPAG00000041519	CLP1	99	76.102	Pan_paniscus
ENSCVAG00000020101	clp1	98	75.638	ENSPPRG00000006135	CLP1	99	75.638	Panthera_pardus
ENSCVAG00000020101	clp1	98	75.638	ENSPTIG00000015866	CLP1	99	75.638	Panthera_tigris_altaica
ENSCVAG00000020101	clp1	98	76.102	ENSPTRG00000047318	CLP1	99	76.102	Pan_troglodytes
ENSCVAG00000020101	clp1	99	75.632	ENSPANG00000017078	CLP1	98	75.632	Papio_anubis
ENSCVAG00000020101	clp1	100	84.719	ENSPKIG00000007697	clp1	100	85.169	Paramormyrops_kingsleyae
ENSCVAG00000020101	clp1	93	72.861	ENSPSIG00000005468	CLP1	99	72.861	Pelodiscus_sinensis
ENSCVAG00000020101	clp1	100	92.290	ENSPMGG00000012171	clp1	100	92.290	Periophthalmus_magnuspinnatus
ENSCVAG00000020101	clp1	98	75.463	ENSPEMG00000011213	-	99	75.463	Peromyscus_maniculatus_bairdii
ENSCVAG00000020101	clp1	95	68.409	ENSPMAG00000006707	clp1	97	68.409	Petromyzon_marinus
ENSCVAG00000020101	clp1	98	75.694	ENSPCIG00000011899	CLP1	99	75.694	Phascolarctos_cinereus
ENSCVAG00000020101	clp1	100	97.052	ENSPFOG00000008169	clp1	100	97.052	Poecilia_formosa
ENSCVAG00000020101	clp1	100	97.052	ENSPLAG00000022388	clp1	100	97.052	Poecilia_latipinna
ENSCVAG00000020101	clp1	100	97.052	ENSPMEG00000021088	clp1	100	97.052	Poecilia_mexicana
ENSCVAG00000020101	clp1	100	97.506	ENSPREG00000017802	clp1	100	97.506	Poecilia_reticulata
ENSCVAG00000020101	clp1	55	73.362	ENSPPYG00000003266	-	100	73.362	Pongo_abelii
ENSCVAG00000020101	clp1	99	75.402	ENSPCOG00000000360	CLP1	99	75.402	Propithecus_coquereli
ENSCVAG00000020101	clp1	98	75.638	ENSPVAG00000016270	CLP1	99	75.638	Pteropus_vampyrus
ENSCVAG00000020101	clp1	100	94.104	ENSPNYG00000017274	clp1	99	94.104	Pundamilia_nyererei
ENSCVAG00000020101	clp1	100	84.375	ENSPNAG00000026460	clp1	100	84.821	Pygocentrus_nattereri
ENSCVAG00000020101	clp1	98	75.231	ENSRNOG00000007416	Clp1	99	75.231	Rattus_norvegicus
ENSCVAG00000020101	clp1	98	76.102	ENSRBIG00000018191	CLP1	99	76.102	Rhinopithecus_bieti
ENSCVAG00000020101	clp1	99	75.632	ENSRROG00000039265	CLP1	99	76.102	Rhinopithecus_roxellana
ENSCVAG00000020101	clp1	94	63.285	ENSSBOG00000010558	-	93	63.285	Saimiri_boliviensis_boliviensis
ENSCVAG00000020101	clp1	98	76.102	ENSSBOG00000032517	-	99	76.102	Saimiri_boliviensis_boliviensis
ENSCVAG00000020101	clp1	98	75.694	ENSSHAG00000015695	CLP1	99	75.694	Sarcophilus_harrisii
ENSCVAG00000020101	clp1	100	84.106	ENSSFOG00015000628	clp1	99	85.261	Scleropages_formosus
ENSCVAG00000020101	clp1	100	94.104	ENSSMAG00000019423	clp1	99	94.104	Scophthalmus_maximus
ENSCVAG00000020101	clp1	100	95.238	ENSSDUG00000014495	clp1	100	95.238	Seriola_dumerili
ENSCVAG00000020101	clp1	100	95.011	ENSSLDG00000000937	clp1	100	95.011	Seriola_lalandi_dorsalis
ENSCVAG00000020101	clp1	55	73.246	ENSSARG00000002459	CLP1	100	73.246	Sorex_araneus
ENSCVAG00000020101	clp1	98	75.231	ENSSPUG00000016811	CLP1	99	75.231	Sphenodon_punctatus
ENSCVAG00000020101	clp1	100	94.558	ENSSPAG00000016052	clp1	100	94.558	Stegastes_partitus
ENSCVAG00000020101	clp1	98	75.638	ENSSSCG00000031442	CLP1	99	75.638	Sus_scrofa
ENSCVAG00000020101	clp1	98	75.694	ENSTGUG00000007002	CLP1	99	75.694	Taeniopygia_guttata
ENSCVAG00000020101	clp1	100	90.023	ENSTRUG00000012602	clp1	100	90.023	Takifugu_rubripes
ENSCVAG00000020101	clp1	100	89.796	ENSTNIG00000013125	clp1	100	89.796	Tetraodon_nigroviridis
ENSCVAG00000020101	clp1	98	75.174	ENSTBEG00000009975	CLP1	99	75.174	Tupaia_belangeri
ENSCVAG00000020101	clp1	98	75.638	ENSTTRG00000002096	CLP1	99	75.638	Tursiops_truncatus
ENSCVAG00000020101	clp1	98	75.638	ENSUAMG00000011388	CLP1	99	75.638	Ursus_americanus
ENSCVAG00000020101	clp1	98	75.638	ENSUMAG00000018317	CLP1	99	75.638	Ursus_maritimus
ENSCVAG00000020101	clp1	100	74.603	ENSVVUG00000017138	CLP1	99	74.603	Vulpes_vulpes
ENSCVAG00000020101	clp1	98	71.363	ENSXETG00000007088	clp1	97	71.594	Xenopus_tropicalis
ENSCVAG00000020101	clp1	100	97.279	ENSXCOG00000002287	clp1	100	97.279	Xiphophorus_couchianus
ENSCVAG00000020101	clp1	100	97.279	ENSXMAG00000009783	clp1	100	97.279	Xiphophorus_maculatus