EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000020140 (Gene tree)
Gene ID: 107097510
Gene Symbol: nop16
Alias: zgc:92910
Full Name: NOP16 nucleolar protein
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 11436 bases
Position: chrKL653203.1:245923-257358
Accession: 107097510
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000031115	Nop16	PF09420.10	3.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000032174	-	5160	XM_015394671	ENSCVAP00000031115	175 (aa)	XP_015250157	UPI000742916E

Gene Model

Click here to download ENSCVAG00000020140's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000020140's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000020140	nop16	99	78.286	ENSAPOG00000010682	-	99	78.286	Acanthochromis_polyacanthus
ENSCVAG00000020140	nop16	95	53.529	ENSAMEG00000006988	-	96	53.529	Ailuropoda_melanoleuca
ENSCVAG00000020140	nop16	100	74.286	ENSACIG00000019263	nop16	100	74.286	Amphilophus_citrinellus
ENSCVAG00000020140	nop16	99	78.286	ENSAOCG00000005504	nop16	99	78.286	Amphiprion_ocellaris
ENSCVAG00000020140	nop16	99	78.286	ENSAPEG00000006605	nop16	99	78.286	Amphiprion_percula
ENSCVAG00000020140	nop16	100	74.576	ENSATEG00000014089	nop16	100	74.576	Anabas_testudineus
ENSCVAG00000020140	nop16	95	57.647	ENSACAG00000006333	-	96	57.647	Anolis_carolinensis
ENSCVAG00000020140	nop16	95	51.176	ENSANAG00000015743	-	95	51.176	Aotus_nancymaae
ENSCVAG00000020140	nop16	95	45.882	ENSANAG00000027410	-	95	45.882	Aotus_nancymaae
ENSCVAG00000020140	nop16	100	73.714	ENSACLG00000025227	nop16	100	73.714	Astatotilapia_calliptera
ENSCVAG00000020140	nop16	95	52.410	ENSAMXG00000006843	nop16	96	52.410	Astyanax_mexicanus
ENSCVAG00000020140	nop16	95	54.706	ENSBTAG00000010734	NOP16	96	54.706	Bos_taurus
ENSCVAG00000020140	nop16	95	52.353	ENSCAFG00000016694	NOP16	96	52.353	Canis_familiaris
ENSCVAG00000020140	nop16	95	52.353	ENSCAFG00020011505	-	90	52.353	Canis_lupus_dingo
ENSCVAG00000020140	nop16	95	54.706	ENSCHIG00000022082	-	96	54.706	Capra_hircus
ENSCVAG00000020140	nop16	95	52.353	ENSTSYG00000030409	-	96	52.353	Carlito_syrichta
ENSCVAG00000020140	nop16	95	45.882	ENSTSYG00000032690	-	95	45.882	Carlito_syrichta
ENSCVAG00000020140	nop16	99	52.542	ENSCPOG00000026072	-	97	52.542	Cavia_porcellus
ENSCVAG00000020140	nop16	88	50.955	ENSCCAG00000026775	-	91	50.955	Cebus_capucinus
ENSCVAG00000020140	nop16	95	52.941	ENSCLAG00000015405	-	96	52.941	Chinchilla_lanigera
ENSCVAG00000020140	nop16	95	53.529	ENSCSAG00000009400	-	96	53.529	Chlorocebus_sabaeus
ENSCVAG00000020140	nop16	100	53.297	ENSCPBG00000022647	-	99	53.297	Chrysemys_picta_bellii
ENSCVAG00000020140	nop16	95	36.000	ENSCING00000006179	-	93	36.000	Ciona_intestinalis
ENSCVAG00000020140	nop16	95	39.766	ENSCSAVG00000000269	-	93	39.766	Ciona_savignyi
ENSCVAG00000020140	nop16	95	53.529	ENSCGRG00001004259	Nop16	96	53.529	Cricetulus_griseus_chok1gshd
ENSCVAG00000020140	nop16	95	53.529	ENSCGRG00000010975	Nop16	96	53.529	Cricetulus_griseus_crigri
ENSCVAG00000020140	nop16	97	65.680	ENSCSEG00000020523	nop16	98	65.680	Cynoglossus_semilaevis
ENSCVAG00000020140	nop16	97	52.907	ENSDARG00000044402	nop16	98	52.907	Danio_rerio
ENSCVAG00000020140	nop16	95	53.846	ENSDNOG00000042890	-	95	53.846	Dasypus_novemcinctus
ENSCVAG00000020140	nop16	97	54.070	ENSDORG00000008872	Nop16	96	54.118	Dipodomys_ordii
ENSCVAG00000020140	nop16	93	44.509	ENSEBUG00000011196	nop16	95	44.509	Eptatretus_burgeri
ENSCVAG00000020140	nop16	95	53.529	ENSEASG00005011988	-	96	53.529	Equus_asinus_asinus
ENSCVAG00000020140	nop16	95	53.529	ENSECAG00000021354	NOP16	96	53.529	Equus_caballus
ENSCVAG00000020140	nop16	95	60.234	ENSELUG00000000401	nop16	97	59.538	Esox_lucius
ENSCVAG00000020140	nop16	95	54.118	ENSFCAG00000025473	-	96	54.118	Felis_catus
ENSCVAG00000020140	nop16	99	51.124	ENSFALG00000008553	-	99	51.124	Ficedula_albicollis
ENSCVAG00000020140	nop16	95	51.765	ENSFDAG00000000193	-	96	51.765	Fukomys_damarensis
ENSCVAG00000020140	nop16	100	85.311	ENSFHEG00000016452	nop16	100	85.311	Fundulus_heteroclitus
ENSCVAG00000020140	nop16	95	53.488	ENSGALG00000003355	-	96	53.488	Gallus_gallus
ENSCVAG00000020140	nop16	89	80.892	ENSGAFG00000011616	nop16	80	84.828	Gambusia_affinis
ENSCVAG00000020140	nop16	97	68.605	ENSGACG00000002618	-	100	68.605	Gasterosteus_aculeatus
ENSCVAG00000020140	nop16	97	65.714	ENSGACG00000003122	-	100	72.650	Gasterosteus_aculeatus
ENSCVAG00000020140	nop16	95	60.479	ENSGACG00000020810	nop16	100	60.479	Gasterosteus_aculeatus
ENSCVAG00000020140	nop16	97	66.471	ENSGACG00000020819	-	100	66.471	Gasterosteus_aculeatus
ENSCVAG00000020140	nop16	100	74.286	ENSHBUG00000013527	nop16	100	74.286	Haplochromis_burtoni
ENSCVAG00000020140	nop16	99	51.412	ENSHGLG00000013437	NOP16	97	51.412	Heterocephalus_glaber_female
ENSCVAG00000020140	nop16	99	51.412	ENSHGLG00100011375	NOP16	97	51.412	Heterocephalus_glaber_male
ENSCVAG00000020140	nop16	97	69.186	ENSHCOG00000019999	nop16	98	69.186	Hippocampus_comes
ENSCVAG00000020140	nop16	94	58.788	ENSIPUG00000006682	nop16	95	58.788	Ictalurus_punctatus
ENSCVAG00000020140	nop16	95	53.488	ENSSTOG00000004869	-	96	53.488	Ictidomys_tridecemlineatus
ENSCVAG00000020140	nop16	97	52.326	ENSJJAG00000017655	Nop16	97	52.326	Jaculus_jaculus
ENSCVAG00000020140	nop16	100	75.706	ENSKMAG00000006164	nop16	100	75.706	Kryptolebias_marmoratus
ENSCVAG00000020140	nop16	100	74.576	ENSLBEG00000018355	nop16	82	74.576	Labrus_bergylta
ENSCVAG00000020140	nop16	56	69.388	ENSLBEG00000013819	-	69	69.388	Labrus_bergylta
ENSCVAG00000020140	nop16	95	62.353	ENSLACG00000014884	nop16	96	62.353	Latimeria_chalumnae
ENSCVAG00000020140	nop16	96	61.404	ENSLOCG00000012348	nop16	95	61.404	Lepisosteus_oculatus
ENSCVAG00000020140	nop16	95	53.846	ENSLAFG00000017886	-	95	53.846	Loxodonta_africana
ENSCVAG00000020140	nop16	99	73.864	ENSMAMG00000021868	nop16	99	73.864	Mastacembelus_armatus
ENSCVAG00000020140	nop16	100	73.714	ENSMZEG00005012112	nop16	100	73.714	Maylandia_zebra
ENSCVAG00000020140	nop16	51	60.000	ENSMAUG00000009852	-	85	60.000	Mesocricetus_auratus
ENSCVAG00000020140	nop16	89	50.633	ENSMAUG00000015569	-	93	50.633	Mesocricetus_auratus
ENSCVAG00000020140	nop16	95	53.529	ENSMOCG00000020788	Nop16	96	53.529	Microtus_ochrogaster
ENSCVAG00000020140	nop16	96	73.529	ENSMMOG00000016054	nop16	99	73.529	Mola_mola
ENSCVAG00000020140	nop16	95	56.725	ENSMODG00000005214	-	96	56.725	Monodelphis_domestica
ENSCVAG00000020140	nop16	100	77.966	ENSMALG00000021263	nop16	100	77.966	Monopterus_albus
ENSCVAG00000020140	nop16	97	51.744	MGP_CAROLIEiJ_G0018538	Nop16	97	51.744	Mus_caroli
ENSCVAG00000020140	nop16	97	52.326	ENSMUSG00000025869	Nop16	97	52.326	Mus_musculus
ENSCVAG00000020140	nop16	95	53.529	MGP_PahariEiJ_G0019603	Nop16	96	53.529	Mus_pahari
ENSCVAG00000020140	nop16	97	51.744	MGP_SPRETEiJ_G0019418	Nop16	97	51.744	Mus_spretus
ENSCVAG00000020140	nop16	95	52.941	ENSMPUG00000012552	-	96	52.941	Mustela_putorius_furo
ENSCVAG00000020140	nop16	95	52.353	ENSMPUG00000016964	-	95	52.353	Mustela_putorius_furo
ENSCVAG00000020140	nop16	95	53.846	ENSMLUG00000003504	-	95	53.846	Myotis_lucifugus
ENSCVAG00000020140	nop16	95	52.941	ENSNGAG00000018045	Nop16	96	52.941	Nannospalax_galili
ENSCVAG00000020140	nop16	97	74.706	ENSNBRG00000015181	nop16	98	74.706	Neolamprologus_brichardi
ENSCVAG00000020140	nop16	95	52.941	ENSODEG00000009586	-	96	52.941	Octodon_degus
ENSCVAG00000020140	nop16	100	74.857	ENSONIG00000016417	nop16	100	74.857	Oreochromis_niloticus
ENSCVAG00000020140	nop16	95	53.529	ENSOCUG00000013171	-	96	53.529	Oryctolagus_cuniculus
ENSCVAG00000020140	nop16	100	71.429	ENSORLG00000026611	nop16	100	71.429	Oryzias_latipes
ENSCVAG00000020140	nop16	99	73.410	ENSOMEG00000023001	nop16	99	73.410	Oryzias_melastigma
ENSCVAG00000020140	nop16	95	54.118	ENSOGAG00000000824	-	96	54.118	Otolemur_garnettii
ENSCVAG00000020140	nop16	95	54.706	ENSOARG00000002165	-	96	54.706	Ovis_aries
ENSCVAG00000020140	nop16	95	52.941	ENSPPAG00000035473	-	96	52.941	Pan_paniscus
ENSCVAG00000020140	nop16	95	54.118	ENSPPRG00000016600	-	96	54.118	Panthera_pardus
ENSCVAG00000020140	nop16	95	54.118	ENSPTIG00000011708	-	96	54.118	Panthera_tigris_altaica
ENSCVAG00000020140	nop16	95	52.941	ENSPTRG00000017560	NOP16	96	52.941	Pan_troglodytes
ENSCVAG00000020140	nop16	98	56.140	ENSPKIG00000009587	nop16	98	56.140	Paramormyrops_kingsleyae
ENSCVAG00000020140	nop16	79	55.172	ENSPSIG00000013546	-	99	55.172	Pelodiscus_sinensis
ENSCVAG00000020140	nop16	95	72.515	ENSPMGG00000003443	nop16	99	72.515	Periophthalmus_magnuspinnatus
ENSCVAG00000020140	nop16	95	52.941	ENSPEMG00000020268	Nop16	96	52.941	Peromyscus_maniculatus_bairdii
ENSCVAG00000020140	nop16	95	54.386	ENSPCIG00000009782	-	96	54.386	Phascolarctos_cinereus
ENSCVAG00000020140	nop16	100	84.746	ENSPFOG00000010549	nop16	100	84.746	Poecilia_formosa
ENSCVAG00000020140	nop16	81	81.690	ENSPLAG00000007124	nop16	74	81.690	Poecilia_latipinna
ENSCVAG00000020140	nop16	100	84.746	ENSPMEG00000008611	nop16	100	84.746	Poecilia_mexicana
ENSCVAG00000020140	nop16	100	84.181	ENSPREG00000012940	nop16	100	84.181	Poecilia_reticulata
ENSCVAG00000020140	nop16	95	52.941	ENSPPYG00000016070	-	96	52.941	Pongo_abelii
ENSCVAG00000020140	nop16	100	73.714	ENSPNYG00000013529	nop16	100	73.714	Pundamilia_nyererei
ENSCVAG00000020140	nop16	94	55.952	ENSPNAG00000016233	nop16	96	55.952	Pygocentrus_nattereri
ENSCVAG00000020140	nop16	95	52.353	ENSRNOG00000017284	Nop16	96	52.353	Rattus_norvegicus
ENSCVAG00000020140	nop16	95	56.140	ENSSHAG00000001724	-	96	56.140	Sarcophilus_harrisii
ENSCVAG00000020140	nop16	90	58.385	ENSSFOG00015010537	nop16	78	57.803	Scleropages_formosus
ENSCVAG00000020140	nop16	100	79.661	ENSSDUG00000022349	nop16	100	79.661	Seriola_dumerili
ENSCVAG00000020140	nop16	100	80.226	ENSSLDG00000025171	nop16	100	80.226	Seriola_lalandi_dorsalis
ENSCVAG00000020140	nop16	73	45.385	ENSSARG00000006699	-	61	45.385	Sorex_araneus
ENSCVAG00000020140	nop16	95	61.176	ENSSPUG00000006508	-	95	61.176	Sphenodon_punctatus
ENSCVAG00000020140	nop16	100	77.841	ENSSPAG00000011772	nop16	100	77.841	Stegastes_partitus
ENSCVAG00000020140	nop16	95	53.529	ENSSSCG00000029577	-	96	53.529	Sus_scrofa
ENSCVAG00000020140	nop16	99	53.073	ENSTGUG00000000543	-	99	53.073	Taeniopygia_guttata
ENSCVAG00000020140	nop16	99	67.614	ENSTRUG00000020255	nop16	99	67.614	Takifugu_rubripes
ENSCVAG00000020140	nop16	98	72.414	ENSTNIG00000007616	nop16	98	72.414	Tetraodon_nigroviridis
ENSCVAG00000020140	nop16	95	52.941	ENSUAMG00000005139	-	96	52.941	Ursus_americanus
ENSCVAG00000020140	nop16	95	52.353	ENSVVUG00000001697	-	90	52.353	Vulpes_vulpes
ENSCVAG00000020140	nop16	95	54.217	ENSXETG00000022342	nop16	98	54.217	Xenopus_tropicalis
ENSCVAG00000020140	nop16	97	84.795	ENSXCOG00000018829	nop16	98	84.795	Xiphophorus_couchianus
ENSCVAG00000020140	nop16	100	84.181	ENSXMAG00000029113	nop16	100	84.181	Xiphophorus_maculatus