EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000020141 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 1126 bases
Position: chrKL653549.1:266884-268009
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000017102	zf-C2H2	PF00096.26	2.6e-14	1	2
ENSCVAP00000017102	zf-C2H2	PF00096.26	2.6e-14	2	2
ENSCVAP00000017102	zf-met	PF12874.7	4.4e-07	1	2
ENSCVAP00000017102	zf-met	PF12874.7	4.4e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000025660	-	474	-	ENSCVAP00000017102	157 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000020141's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000020141's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000020141	-	68	48.276	ENSCVAG00000001369	-	76	48.276
ENSCVAG00000020141	-	62	55.000	ENSCVAG00000020155	-	80	55.000
ENSCVAG00000020141	-	62	40.860	ENSCVAG00000017168	gfi1b	55	40.860
ENSCVAG00000020141	-	80	45.556	ENSCVAG00000009827	-	96	45.556
ENSCVAG00000020141	-	84	36.364	ENSCVAG00000003417	-	81	36.364
ENSCVAG00000020141	-	75	43.478	ENSCVAG00000011334	-	75	43.478
ENSCVAG00000020141	-	64	45.055	ENSCVAG00000012207	-	92	45.055
ENSCVAG00000020141	-	66	44.048	ENSCVAG00000022174	-	54	44.048
ENSCVAG00000020141	-	64	47.059	ENSCVAG00000012620	-	99	47.059
ENSCVAG00000020141	-	73	57.692	ENSCVAG00000000227	-	70	57.692
ENSCVAG00000020141	-	71	46.512	ENSCVAG00000002488	-	71	46.512
ENSCVAG00000020141	-	85	55.172	ENSCVAG00000012543	-	99	55.172
ENSCVAG00000020141	-	85	55.682	ENSCVAG00000016883	-	57	55.682
ENSCVAG00000020141	-	82	47.059	ENSCVAG00000019705	-	80	47.059
ENSCVAG00000020141	-	85	59.091	ENSCVAG00000017890	-	96	59.091
ENSCVAG00000020141	-	81	44.872	ENSCVAG00000004958	-	65	44.872
ENSCVAG00000020141	-	63	41.667	ENSCVAG00000004388	-	51	41.667
ENSCVAG00000020141	-	78	39.535	ENSCVAG00000004382	-	88	39.535
ENSCVAG00000020141	-	69	49.398	ENSCVAG00000008206	-	84	49.398
ENSCVAG00000020141	-	80	66.667	ENSCVAG00000006673	-	60	66.667
ENSCVAG00000020141	-	85	42.353	ENSCVAG00000003250	-	62	43.373
ENSCVAG00000020141	-	59	47.826	ENSCVAG00000001417	-	96	47.826
ENSCVAG00000020141	-	75	52.941	ENSCVAG00000023054	-	61	52.941
ENSCVAG00000020141	-	85	48.864	ENSCVAG00000012302	-	85	48.864
ENSCVAG00000020141	-	62	43.299	ENSCVAG00000019519	-	67	43.299
ENSCVAG00000020141	-	83	51.613	ENSCVAG00000012284	-	78	51.613
ENSCVAG00000020141	-	74	50.000	ENSCVAG00000016181	-	94	50.000
ENSCVAG00000020141	-	85	50.602	ENSCVAG00000016862	-	89	50.602
ENSCVAG00000020141	-	74	47.059	ENSCVAG00000005112	-	66	47.059
ENSCVAG00000020141	-	80	48.235	ENSCVAG00000012180	-	95	50.000
ENSCVAG00000020141	-	72	45.122	ENSCVAG00000014622	-	67	45.122
ENSCVAG00000020141	-	87	43.878	ENSCVAG00000009981	-	98	43.878
ENSCVAG00000020141	-	82	38.824	ENSCVAG00000009258	znf319b	64	38.095
ENSCVAG00000020141	-	81	49.412	ENSCVAG00000017511	-	88	49.412
ENSCVAG00000020141	-	75	51.250	ENSCVAG00000007051	-	98	51.250
ENSCVAG00000020141	-	76	43.038	ENSCVAG00000011235	-	85	43.038
ENSCVAG00000020141	-	83	47.727	ENSCVAG00000014322	-	85	47.727
ENSCVAG00000020141	-	65	42.308	ENSCVAG00000000144	-	61	42.308
ENSCVAG00000020141	-	89	48.352	ENSCVAG00000013337	-	98	50.000
ENSCVAG00000020141	-	89	50.588	ENSCVAG00000010442	-	98	50.588
ENSCVAG00000020141	-	87	50.000	ENSCVAG00000012248	-	93	50.000
ENSCVAG00000020141	-	54	42.857	ENSCVAG00000019122	-	100	42.857
ENSCVAG00000020141	-	82	48.235	ENSCVAG00000001767	-	87	48.235
ENSCVAG00000020141	-	61	55.294	ENSCVAG00000011469	-	76	55.294
ENSCVAG00000020141	-	83	51.087	ENSCVAG00000020745	-	96	58.065
ENSCVAG00000020141	-	72	46.341	ENSCVAG00000000351	-	57	46.341
ENSCVAG00000020141	-	70	43.299	ENSCVAG00000008952	-	90	43.299
ENSCVAG00000020141	-	82	44.444	ENSCVAG00000001609	-	78	44.643
ENSCVAG00000020141	-	56	47.059	ENSCVAG00000002284	-	67	47.059
ENSCVAG00000020141	-	68	65.625	ENSCVAG00000021225	-	99	65.625
ENSCVAG00000020141	-	82	48.387	ENSCVAG00000002833	-	76	48.387
ENSCVAG00000020141	-	74	47.059	ENSCVAG00000002295	-	76	47.059
ENSCVAG00000020141	-	76	48.889	ENSCVAG00000005507	-	89	48.889
ENSCVAG00000020141	-	77	46.032	ENSCVAG00000002506	-	99	46.032
ENSCVAG00000020141	-	54	38.462	ENSCVAG00000002502	-	92	38.462
ENSCVAG00000020141	-	94	48.529	ENSCVAG00000002500	-	85	48.529
ENSCVAG00000020141	-	80	49.254	ENSCVAG00000014269	-	96	49.254
ENSCVAG00000020141	-	77	49.091	ENSCVAG00000017005	sall3b	80	49.091
ENSCVAG00000020141	-	82	48.235	ENSCVAG00000012343	-	94	48.235
ENSCVAG00000020141	-	69	45.333	ENSCVAG00000000419	-	65	45.333
ENSCVAG00000020141	-	65	46.591	ENSCVAG00000006460	-	69	46.591
ENSCVAG00000020141	-	63	44.578	ENSCVAG00000019646	-	69	44.578
ENSCVAG00000020141	-	84	36.782	ENSCVAG00000003601	ZNF319	83	37.079
ENSCVAG00000020141	-	75	42.353	ENSCVAG00000008836	-	79	42.353
ENSCVAG00000020141	-	92	48.454	ENSCVAG00000003497	-	85	50.000
ENSCVAG00000020141	-	59	47.059	ENSCVAG00000017515	-	80	47.059
ENSCVAG00000020141	-	62	40.206	ENSCVAG00000010887	-	51	40.206
ENSCVAG00000020141	-	69	51.020	ENSCVAG00000003512	-	85	51.020
ENSCVAG00000020141	-	82	46.552	ENSCVAG00000003514	-	81	46.552
ENSCVAG00000020141	-	79	45.783	ENSCVAG00000008535	-	81	45.783
ENSCVAG00000020141	-	59	47.059	ENSCVAG00000016964	-	87	47.059
ENSCVAG00000020141	-	78	47.059	ENSCVAG00000014404	-	93	47.059
ENSCVAG00000020141	-	77	53.333	ENSCVAG00000022991	-	92	52.809
ENSCVAG00000020141	-	64	50.602	ENSCVAG00000015616	-	73	50.602
ENSCVAG00000020141	-	85	47.727	ENSCVAG00000019537	-	91	47.727
ENSCVAG00000020141	-	67	52.564	ENSCVAG00000013382	-	59	52.564
ENSCVAG00000020141	-	96	44.565	ENSCVAG00000006389	-	97	45.783
ENSCVAG00000020141	-	73	63.333	ENSCVAG00000001444	-	98	63.333
ENSCVAG00000020141	-	91	48.193	ENSCVAG00000002242	-	94	48.193
ENSCVAG00000020141	-	66	48.810	ENSCVAG00000009103	-	87	48.810
ENSCVAG00000020141	-	92	37.273	ENSCVAG00000018485	-	87	37.273
ENSCVAG00000020141	-	60	45.055	ENSCVAG00000003434	-	80	45.055
ENSCVAG00000020141	-	74	55.128	ENSCVAG00000018383	-	76	55.128
ENSCVAG00000020141	-	79	45.882	ENSCVAG00000003433	-	96	45.882
ENSCVAG00000020141	-	82	51.765	ENSCVAG00000005494	-	89	51.765
ENSCVAG00000020141	-	97	47.059	ENSCVAG00000000423	-	96	47.059
ENSCVAG00000020141	-	85	50.588	ENSCVAG00000008200	-	98	50.588
ENSCVAG00000020141	-	71	51.136	ENSCVAG00000012228	-	87	51.136
ENSCVAG00000020141	-	57	46.429	ENSCVAG00000009747	-	54	46.429
ENSCVAG00000020141	-	96	50.602	ENSCVAG00000016796	-	88	50.602
ENSCVAG00000020141	-	59	48.387	ENSCVAG00000003630	-	62	48.387
ENSCVAG00000020141	-	78	44.565	ENSCVAG00000004368	-	75	44.565
ENSCVAG00000020141	-	86	47.761	ENSCVAG00000006653	-	75	47.761
ENSCVAG00000020141	-	85	49.624	ENSCVAG00000006659	-	50	49.624
ENSCVAG00000020141	-	57	44.706	ENSCVAG00000002305	-	75	44.706
ENSCVAG00000020141	-	78	43.902	ENSCVAG00000002307	-	70	43.902
ENSCVAG00000020141	-	80	48.864	ENSCVAG00000020119	-	76	48.864
ENSCVAG00000020141	-	64	46.341	ENSCVAG00000019097	-	64	46.341
ENSCVAG00000020141	-	69	41.026	ENSCVAG00000011712	-	53	41.026
ENSCVAG00000020141	-	87	45.882	ENSCVAG00000006491	-	75	48.193
ENSCVAG00000020141	-	83	49.438	ENSCVAG00000015153	-	77	49.438
ENSCVAG00000020141	-	71	50.000	ENSCVAG00000002252	-	91	50.000
ENSCVAG00000020141	-	84	47.312	ENSCVAG00000003428	-	96	47.312
ENSCVAG00000020141	-	74	40.000	ENSCVAG00000014734	-	91	40.000
ENSCVAG00000020141	-	90	50.000	ENSCVAG00000021107	-	98	50.000
ENSCVAG00000020141	-	70	54.545	ENSCVAG00000012216	-	94	54.545
ENSCVAG00000020141	-	69	50.588	ENSCVAG00000012399	-	90	50.588
ENSCVAG00000020141	-	69	49.412	ENSCVAG00000009752	-	64	49.412
ENSCVAG00000020141	-	66	45.783	ENSCVAG00000001568	-	84	45.783
ENSCVAG00000020141	-	69	47.059	ENSCVAG00000007169	-	53	47.059
ENSCVAG00000020141	-	62	47.619	ENSCVAG00000004508	-	62	47.619
ENSCVAG00000020141	-	80	47.059	ENSCVAG00000007073	-	72	48.864
ENSCVAG00000020141	-	70	62.745	ENSCVAG00000016898	-	94	62.745
ENSCVAG00000020141	-	83	45.455	ENSCVAG00000020126	-	72	47.059
ENSCVAG00000020141	-	85	57.000	ENSCVAG00000016915	-	59	57.000
ENSCVAG00000020141	-	68	40.476	ENSCVAG00000018507	-	70	40.476
ENSCVAG00000020141	-	66	42.857	ENSCVAG00000003396	-	63	42.857
ENSCVAG00000020141	-	72	42.353	ENSCVAG00000011213	-	95	46.053
ENSCVAG00000020141	-	69	50.000	ENSCVAG00000010160	-	82	50.000
ENSCVAG00000020141	-	89	54.839	ENSCVAG00000006667	-	56	54.839
ENSCVAG00000020141	-	63	59.649	ENSCVAG00000012520	-	76	59.649
ENSCVAG00000020141	-	64	45.882	ENSCVAG00000020938	-	96	45.882
ENSCVAG00000020141	-	85	58.209	ENSCVAG00000019767	-	62	58.209
ENSCVAG00000020141	-	71	50.588	ENSCVAG00000019764	-	66	50.588

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000020141	-	73	47.727	ENSAPOG00000019138	-	56	47.727	Acanthochromis_polyacanthus
ENSCVAG00000020141	-	70	37.500	ENSACIG00000017892	-	79	37.500	Amphilophus_citrinellus
ENSCVAG00000020141	-	68	39.216	ENSACIG00000002944	-	52	31.250	Amphilophus_citrinellus
ENSCVAG00000020141	-	64	41.772	ENSACIG00000006826	-	52	41.772	Amphilophus_citrinellus
ENSCVAG00000020141	-	76	40.367	ENSACIG00000004641	-	58	40.367	Amphilophus_citrinellus
ENSCVAG00000020141	-	57	36.082	ENSAOCG00000006744	-	58	36.082	Amphiprion_ocellaris
ENSCVAG00000020141	-	83	46.154	ENSAOCG00000016897	-	65	46.154	Amphiprion_ocellaris
ENSCVAG00000020141	-	64	42.553	ENSAOCG00000001325	-	63	42.553	Amphiprion_ocellaris
ENSCVAG00000020141	-	86	43.023	ENSAPEG00000010013	-	56	43.023	Amphiprion_percula
ENSCVAG00000020141	-	79	46.154	ENSAPEG00000001556	-	65	46.154	Amphiprion_percula
ENSCVAG00000020141	-	96	42.308	ENSATEG00000018931	-	82	42.308	Anabas_testudineus
ENSCVAG00000020141	-	88	43.210	ENSACLG00000005694	-	58	43.210	Astatotilapia_calliptera
ENSCVAG00000020141	-	64	53.448	ENSACLG00000011658	-	57	53.448	Astatotilapia_calliptera
ENSCVAG00000020141	-	59	46.512	ENSACLG00000019154	-	78	46.512	Astatotilapia_calliptera
ENSCVAG00000020141	-	59	36.264	ENSCING00000002128	zf(c2h2)-35	62	40.964	Ciona_intestinalis
ENSCVAG00000020141	-	57	44.304	ENSCSEG00000010264	-	66	44.304	Cynoglossus_semilaevis
ENSCVAG00000020141	-	71	47.059	ENSCSEG00000010453	-	63	47.059	Cynoglossus_semilaevis
ENSCVAG00000020141	-	62	46.053	ENSCSEG00000015593	-	74	46.053	Cynoglossus_semilaevis
ENSCVAG00000020141	-	68	44.156	ENSEBUG00000002290	-	56	44.156	Eptatretus_burgeri
ENSCVAG00000020141	-	59	44.186	ENSEBUG00000007931	-	59	44.186	Eptatretus_burgeri
ENSCVAG00000020141	-	94	45.783	ENSELUG00000020882	-	51	45.783	Esox_lucius
ENSCVAG00000020141	-	75	41.558	ENSELUG00000024007	-	59	41.558	Esox_lucius
ENSCVAG00000020141	-	68	39.394	ENSELUG00000001909	-	62	37.500	Esox_lucius
ENSCVAG00000020141	-	89	49.462	ENSGAFG00000008204	-	76	49.462	Gambusia_affinis
ENSCVAG00000020141	-	61	45.570	ENSGAFG00000001879	-	58	45.570	Gambusia_affinis
ENSCVAG00000020141	-	82	43.210	ENSHBUG00000006656	-	72	43.210	Haplochromis_burtoni
ENSCVAG00000020141	-	81	46.591	ENSHCOG00000013489	-	95	46.591	Hippocampus_comes
ENSCVAG00000020141	-	81	48.315	ENSHCOG00000001873	-	60	48.315	Hippocampus_comes
ENSCVAG00000020141	-	81	48.315	ENSHCOG00000008550	-	60	48.315	Hippocampus_comes
ENSCVAG00000020141	-	79	41.935	ENSHCOG00000008213	-	50	41.935	Hippocampus_comes
ENSCVAG00000020141	-	61	41.791	ENSHCOG00000020670	-	73	41.791	Hippocampus_comes
ENSCVAG00000020141	-	58	52.273	ENSHCOG00000015497	-	75	52.273	Hippocampus_comes
ENSCVAG00000020141	-	82	35.714	ENSIPUG00000024004	-	78	35.714	Ictalurus_punctatus
ENSCVAG00000020141	-	66	41.667	ENSKMAG00000007699	-	64	41.667	Kryptolebias_marmoratus
ENSCVAG00000020141	-	63	43.902	ENSLBEG00000007106	-	65	43.902	Labrus_bergylta
ENSCVAG00000020141	-	70	40.000	ENSLBEG00000017424	-	94	40.000	Labrus_bergylta
ENSCVAG00000020141	-	88	38.462	ENSLBEG00000001132	-	59	38.462	Labrus_bergylta
ENSCVAG00000020141	-	75	40.244	ENSLBEG00000006161	-	91	40.244	Labrus_bergylta
ENSCVAG00000020141	-	90	43.023	ENSLOCG00000004208	-	92	44.048	Lepisosteus_oculatus
ENSCVAG00000020141	-	96	40.964	ENSMAMG00000017939	-	73	40.964	Mastacembelus_armatus
ENSCVAG00000020141	-	80	38.298	ENSMZEG00005013907	-	76	38.298	Maylandia_zebra
ENSCVAG00000020141	-	57	38.571	ENSMMOG00000013330	-	59	36.471	Mola_mola
ENSCVAG00000020141	-	59	41.463	ENSMALG00000004279	-	72	41.463	Monopterus_albus
ENSCVAG00000020141	-	75	47.561	ENSONIG00000007967	-	54	47.561	Oreochromis_niloticus
ENSCVAG00000020141	-	81	51.786	ENSORLG00000021885	-	71	49.438	Oryzias_latipes
ENSCVAG00000020141	-	76	47.945	ENSORLG00000002268	-	74	47.945	Oryzias_latipes
ENSCVAG00000020141	-	74	47.059	ENSORLG00020019227	-	56	40.698	Oryzias_latipes_hni
ENSCVAG00000020141	-	95	43.182	ENSORLG00020018921	-	78	43.182	Oryzias_latipes_hni
ENSCVAG00000020141	-	64	47.872	ENSORLG00015018099	-	63	47.872	Oryzias_latipes_hsok
ENSCVAG00000020141	-	68	41.558	ENSOMEG00000005578	-	63	41.558	Oryzias_melastigma
ENSCVAG00000020141	-	63	47.059	ENSPMGG00000002659	-	64	44.565	Periophthalmus_magnuspinnatus
ENSCVAG00000020141	-	87	43.373	ENSPMGG00000002455	-	82	43.243	Periophthalmus_magnuspinnatus
ENSCVAG00000020141	-	69	48.352	ENSPMGG00000002661	-	69	48.352	Periophthalmus_magnuspinnatus
ENSCVAG00000020141	-	59	47.436	ENSPMGG00000009571	-	71	47.436	Periophthalmus_magnuspinnatus
ENSCVAG00000020141	-	55	44.444	ENSPMGG00000019750	-	78	44.444	Periophthalmus_magnuspinnatus
ENSCVAG00000020141	-	63	37.805	ENSPMAG00000004189	-	85	37.805	Petromyzon_marinus
ENSCVAG00000020141	-	75	36.842	ENSPMAG00000002022	-	59	36.842	Petromyzon_marinus
ENSCVAG00000020141	-	59	44.068	ENSPMAG00000000839	-	85	44.068	Petromyzon_marinus
ENSCVAG00000020141	-	94	43.373	ENSPFOG00000018860	-	99	43.373	Poecilia_formosa
ENSCVAG00000020141	-	70	42.353	ENSPFOG00000009491	-	59	42.353	Poecilia_formosa
ENSCVAG00000020141	-	71	44.706	ENSPLAG00000010067	-	69	44.706	Poecilia_latipinna
ENSCVAG00000020141	-	64	43.373	ENSPLAG00000008941	-	79	43.373	Poecilia_latipinna
ENSCVAG00000020141	-	56	43.373	ENSPLAG00000014832	-	75	43.373	Poecilia_latipinna
ENSCVAG00000020141	-	69	47.222	ENSPMEG00000002953	-	59	47.222	Poecilia_mexicana
ENSCVAG00000020141	-	70	42.353	ENSPMEG00000024117	-	59	42.353	Poecilia_mexicana
ENSCVAG00000020141	-	56	43.373	ENSPMEG00000005210	-	75	43.373	Poecilia_mexicana
ENSCVAG00000020141	-	70	41.667	ENSPREG00000009488	-	90	41.667	Poecilia_reticulata
ENSCVAG00000020141	-	64	47.561	ENSPREG00000002603	-	60	47.561	Poecilia_reticulata
ENSCVAG00000020141	-	66	41.772	ENSPNAG00000005946	-	79	38.043	Pygocentrus_nattereri
ENSCVAG00000020141	-	57	37.975	ENSSFOG00015011531	-	79	35.294	Scleropages_formosus
ENSCVAG00000020141	-	72	42.529	ENSSMAG00000013291	-	91	42.529	Scophthalmus_maximus
ENSCVAG00000020141	-	89	35.374	ENSSDUG00000020774	-	53	34.752	Seriola_dumerili
ENSCVAG00000020141	-	67	43.011	ENSSLDG00000014436	-	60	42.553	Seriola_lalandi_dorsalis
ENSCVAG00000020141	-	86	43.023	ENSSPAG00000011544	-	59	43.023	Stegastes_partitus
ENSCVAG00000020141	-	80	43.750	ENSSPAG00000011533	-	76	43.750	Stegastes_partitus
ENSCVAG00000020141	-	68	43.860	ENSSPAG00000005770	-	51	43.860	Stegastes_partitus
ENSCVAG00000020141	-	87	42.308	ENSXETG00000012506	znf91	96	42.308	Xenopus_tropicalis
ENSCVAG00000020141	-	62	44.444	ENSXCOG00000000254	-	63	44.444	Xiphophorus_couchianus
ENSCVAG00000020141	-	58	41.379	ENSXCOG00000020768	-	66	41.379	Xiphophorus_couchianus
ENSCVAG00000020141	-	56	43.373	ENSXMAG00000012936	-	75	43.373	Xiphophorus_maculatus