EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCVAG00000020144 (Gene tree)
Gene ID
107094193
Gene Symbol
rbm47
Alias
si:ch211-241e15.2|wu:fj94a03
Full Name
RNA binding motif protein 47
Gene Type
protein_coding
Species
Cyprinodon_variegatus
Status
putative
Strand
Minus strand
Length
45587 bases
Position
chrKL652969.1:170394-215980
Accession
107094193
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCVAP00000031110RRM_1PF00076.222.2e-3913
ENSCVAP00000031110RRM_1PF00076.222.2e-3923
ENSCVAP00000031110RRM_1PF00076.222.2e-3933
ENSCVAP00000017094RRM_1PF00076.222.3e-3913
ENSCVAP00000017094RRM_1PF00076.222.3e-3923
ENSCVAP00000017094RRM_1PF00076.222.3e-3933
ENSCVAP00000031099RRM_1PF00076.223.2e-3913
ENSCVAP00000031099RRM_1PF00076.223.2e-3923
ENSCVAP00000031099RRM_1PF00076.223.2e-3933
ENSCVAP00000017103RRM_1PF00076.223.5e-3913
ENSCVAP00000017103RRM_1PF00076.223.5e-3923
ENSCVAP00000017103RRM_1PF00076.223.5e-3933
ENSCVAP00000017081RRM_1PF00076.223.8e-3913
ENSCVAP00000017081RRM_1PF00076.223.8e-3923
ENSCVAP00000017081RRM_1PF00076.223.8e-3933
ENSCVAP00000017088RRM_1PF00076.223.8e-3913
ENSCVAP00000017088RRM_1PF00076.223.8e-3923
ENSCVAP00000017088RRM_1PF00076.223.8e-3933
ENSCVAP00000017112RRM_1PF00076.223.8e-3913
ENSCVAP00000017112RRM_1PF00076.223.8e-3923
ENSCVAP00000017112RRM_1PF00076.223.8e-3933
ENSCVAP00000031130RRM_1PF00076.223.8e-3913
ENSCVAP00000031130RRM_1PF00076.223.8e-3923
ENSCVAP00000031130RRM_1PF00076.223.8e-3933
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCVAT00000032175-7094XM_015389659ENSCVAP00000031130614 (aa)XP_015245145UPI000742CD39
ENSCVAT00000025650-6860XM_015389667ENSCVAP00000031110536 (aa)XP_015245153UPI00074284DB
ENSCVAT00000025642-6558XM_015389661ENSCVAP00000017081614 (aa)XP_015245147UPI000742CD39
ENSCVAT00000025656-6884-ENSCVAP00000017094544 (aa)--
ENSCVAT00000025662-7070XM_015389665ENSCVAP00000017103606 (aa)XP_015245151UPI0007426B3C
ENSCVAT00000025685-6563XM_015389660ENSCVAP00000017112614 (aa)XP_015245146UPI000742CD39
ENSCVAT00000025633-6454XM_015389663ENSCVAP00000017088614 (aa)XP_015245149UPI000742CD39
ENSCVAT00000025622-1764-ENSCVAP00000031099587 (aa)--
Gene Model
Click here to download ENSCVAG00000020144's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000020144's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCVAG00000020144rbm475864.516ENSCVAG00000021013rbm466566.230
ENSCVAG00000020144rbm478051.009ENSCVAG00000010520a1cf9151.091
ENSCVAG00000020144rbm475752.903ENSCVAG00000012550syncrip6846.465
ENSCVAG00000020144rbm475654.305ENSCVAG00000019995syncripl7047.668
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCVAG00000020144rbm4710081.117ENSG00000163694RBM4710086.175Homo_sapiens
ENSCVAG00000020144rbm4710095.373ENSAPOG00000011062rbm4710095.373Acanthochromis_polyacanthus
ENSCVAG00000020144rbm479384.463ENSAMEG00000009672RBM4710074.833Ailuropoda_melanoleuca
ENSCVAG00000020144rbm4710091.681ENSACIG00000011531rbm4710091.681Amphilophus_citrinellus
ENSCVAG00000020144rbm4710095.373ENSAOCG00000022245rbm4710095.373Amphiprion_ocellaris
ENSCVAG00000020144rbm4710095.373ENSAPEG00000018304rbm4710095.373Amphiprion_percula
ENSCVAG00000020144rbm4710093.830ENSATEG00000018400rbm4710091.269Anabas_testudineus
ENSCVAG00000020144rbm4710082.487ENSAPLG00000013974RBM4710075.418Anas_platyrhynchos
ENSCVAG00000020144rbm4710078.772ENSACAG00000011833RBM4710075.042Anolis_carolinensis
ENSCVAG00000020144rbm4710082.804ENSANAG00000029440RBM479883.607Aotus_nancymaae
ENSCVAG00000020144rbm4710092.545ENSACLG00000016902rbm4710092.545Astatotilapia_calliptera
ENSCVAG00000020144rbm4710082.915ENSAMXG00000021794rbm4710084.910Astyanax_mexicanus
ENSCVAG00000020144rbm4710080.102ENSBTAG00000002356RBM4710076.303Bos_taurus
ENSCVAG00000020144rbm479884.298ENSCJAG00000019385RBM479883.607Callithrix_jacchus
ENSCVAG00000020144rbm479384.703ENSCAFG00000015898RBM479677.352Canis_familiaris
ENSCVAG00000020144rbm477884.703ENSCAFG00020010558RBM478984.419Canis_lupus_dingo
ENSCVAG00000020144rbm4710080.102ENSCHIG00000026214RBM4710076.303Capra_hircus
ENSCVAG00000020144rbm478486.547ENSTSYG00000033612RBM479286.547Carlito_syrichta
ENSCVAG00000020144rbm4710072.308ENSCAPG00000008426RBM479677.054Cavia_aperea
ENSCVAG00000020144rbm4710079.540ENSCPOG00000014100RBM479684.746Cavia_porcellus
ENSCVAG00000020144rbm479955.276ENSCCAG00000024397-9954.622Cebus_capucinus
ENSCVAG00000020144rbm4710081.888ENSCCAG00000030129-9883.880Cebus_capucinus
ENSCVAG00000020144rbm4710081.117ENSCATG00000042064RBM479883.880Cercocebus_atys
ENSCVAG00000020144rbm479385.311ENSCLAG00000001684RBM4710082.278Chinchilla_lanigera
ENSCVAG00000020144rbm479384.986ENSCSAG00000017060RBM4710075.960Chlorocebus_sabaeus
ENSCVAG00000020144rbm478974.550ENSCHOG00000011731RBM478875.730Choloepus_hoffmanni
ENSCVAG00000020144rbm4710083.418ENSCPBG00000013831RBM4710077.759Chrysemys_picta_bellii
ENSCVAG00000020144rbm4710082.275ENSCANG00000019997RBM479883.880Colobus_angolensis_palliatus
ENSCVAG00000020144rbm4710079.442ENSCGRG00001000623-9685.352Cricetulus_griseus_chok1gshd
ENSCVAG00000020144rbm4710068.692ENSCGRG00001020102-9682.022Cricetulus_griseus_chok1gshd
ENSCVAG00000020144rbm478877.454ENSCGRG00000014760-9682.022Cricetulus_griseus_crigri
ENSCVAG00000020144rbm4710078.934ENSCGRG00000007762-10082.278Cricetulus_griseus_crigri
ENSCVAG00000020144rbm4710088.814ENSCSEG00000004545rbm4710088.814Cynoglossus_semilaevis
ENSCVAG00000020144rbm4710085.427ENSDARG00000061985rbm4710082.871Danio_rerio
ENSCVAG00000020144rbm479386.479ENSDNOG00000046854RBM4710076.768Dasypus_novemcinctus
ENSCVAG00000020144rbm4710079.747ENSDORG00000010144Rbm4710075.374Dipodomys_ordii
ENSCVAG00000020144rbm479383.473ENSETEG00000009194RBM4710075.585Echinops_telfairi
ENSCVAG00000020144rbm479659.483ENSEBUG00000011912rbm479659.138Eptatretus_burgeri
ENSCVAG00000020144rbm479385.634ENSEASG00005008443RBM4710076.471Equus_asinus_asinus
ENSCVAG00000020144rbm479385.634ENSECAG00000004400RBM4710076.471Equus_caballus
ENSCVAG00000020144rbm477089.474ENSEEUG00000001194RBM477290.431Erinaceus_europaeus
ENSCVAG00000020144rbm4710087.848ENSELUG00000006148rbm4710086.935Esox_lucius
ENSCVAG00000020144rbm479384.463ENSFCAG00000012399RBM4710076.728Felis_catus
ENSCVAG00000020144rbm4710082.653ENSFALG00000002861RBM4710077.759Ficedula_albicollis
ENSCVAG00000020144rbm4710079.540ENSFDAG00000016326RBM4710078.005Fukomys_damarensis
ENSCVAG00000020144rbm4710096.915ENSFHEG00000007938rbm4710094.728Fundulus_heteroclitus
ENSCVAG00000020144rbm4710087.563ENSGMOG00000014802rbm4710087.121Gadus_morhua
ENSCVAG00000020144rbm477382.908ENSGALG00000014267RBM4710083.289Gallus_gallus
ENSCVAG00000020144rbm477392.288ENSGAFG00000020571rbm479896.496Gambusia_affinis
ENSCVAG00000020144rbm4710090.746ENSGACG00000016223rbm4710090.746Gasterosteus_aculeatus
ENSCVAG00000020144rbm4710083.418ENSGAGG00000020051RBM4710077.759Gopherus_agassizii
ENSCVAG00000020144rbm4710081.117ENSGGOG00000001367RBM479883.880Gorilla_gorilla
ENSCVAG00000020144rbm4710092.545ENSHBUG00000003520rbm4710092.545Haplochromis_burtoni
ENSCVAG00000020144rbm4710058.889ENSHGLG00000016914RBM4710078.481Heterocephalus_glaber_female
ENSCVAG00000020144rbm4710076.215ENSHGLG00100003071-10067.731Heterocephalus_glaber_male
ENSCVAG00000020144rbm4710080.563ENSHGLG00100014028-10078.517Heterocephalus_glaber_male
ENSCVAG00000020144rbm479990.488ENSHCOG00000002074rbm479992.802Hippocampus_comes
ENSCVAG00000020144rbm4710087.949ENSIPUG00000004743rbm479792.090Ictalurus_punctatus
ENSCVAG00000020144rbm479384.746ENSSTOG00000004727RBM4710082.278Ictidomys_tridecemlineatus
ENSCVAG00000020144rbm479386.158ENSJJAG00000013823Rbm4710074.333Jaculus_jaculus
ENSCVAG00000020144rbm4710094.359ENSKMAG00000000084rbm4710094.359Kryptolebias_marmoratus
ENSCVAG00000020144rbm4710092.802ENSLBEG00000008436rbm4710092.443Labrus_bergylta
ENSCVAG00000020144rbm479388.764ENSLACG00000007196RBM4710078.319Latimeria_chalumnae
ENSCVAG00000020144rbm479390.625ENSLOCG00000012966rbm479583.165Lepisosteus_oculatus
ENSCVAG00000020144rbm4710079.540ENSLAFG00000011998RBM4710075.336Loxodonta_africana
ENSCVAG00000020144rbm4710081.117ENSMFAG00000037967RBM479883.880Macaca_fascicularis
ENSCVAG00000020144rbm479384.986ENSMMUG00000012036RBM4710084.456Macaca_mulatta
ENSCVAG00000020144rbm4710080.851ENSMNEG00000040774RBM479883.880Macaca_nemestrina
ENSCVAG00000020144rbm4710083.492ENSMLEG00000041432RBM4710084.444Mandrillus_leucophaeus
ENSCVAG00000020144rbm4710094.602ENSMAMG00000019143rbm4710094.602Mastacembelus_armatus
ENSCVAG00000020144rbm4710092.545ENSMZEG00005023659rbm4710092.443Maylandia_zebra
ENSCVAG00000020144rbm4710082.908ENSMGAG00000012226RBM4710077.870Meleagris_gallopavo
ENSCVAG00000020144rbm4710081.698ENSMAUG00000006493Rbm4710081.646Mesocricetus_auratus
ENSCVAG00000020144rbm4710079.200ENSMICG00000026417RBM479683.853Microcebus_murinus
ENSCVAG00000020144rbm4710081.915ENSMOCG00000021170Rbm4710081.646Microtus_ochrogaster
ENSCVAG00000020144rbm4710090.280ENSMMOG00000007260rbm4710090.280Mola_mola
ENSCVAG00000020144rbm4710078.772ENSMODG00000020561-9673.730Monodelphis_domestica
ENSCVAG00000020144rbm475877.987ENSMODG00000015426-9777.419Monodelphis_domestica
ENSCVAG00000020144rbm4710082.353ENSMODG00000007003RBM4710075.839Monodelphis_domestica
ENSCVAG00000020144rbm4710093.316ENSMALG00000005167rbm4710093.316Monopterus_albus
ENSCVAG00000020144rbm4710081.915MGP_CAROLIEiJ_G0027258Rbm4710081.649Mus_caroli
ENSCVAG00000020144rbm4710082.181ENSMUSG00000070780Rbm4710081.915Mus_musculus
ENSCVAG00000020144rbm4710082.181MGP_PahariEiJ_G0017040Rbm4710081.915Mus_pahari
ENSCVAG00000020144rbm4710082.181MGP_SPRETEiJ_G0028253Rbm4710081.915Mus_spretus
ENSCVAG00000020144rbm479385.311ENSMPUG00000006177RBM479475.712Mustela_putorius_furo
ENSCVAG00000020144rbm4710080.916ENSMLUG00000000889RBM4710075.798Myotis_lucifugus
ENSCVAG00000020144rbm4710080.612ENSNGAG00000003325Rbm4710075.125Nannospalax_galili
ENSCVAG00000020144rbm4710093.059ENSNBRG00000015092rbm4710090.049Neolamprologus_brichardi
ENSCVAG00000020144rbm4710081.117ENSNLEG00000017151RBM479883.880Nomascus_leucogenys
ENSCVAG00000020144rbm476687.288ENSMEUG00000009516-9979.009Notamacropus_eugenii
ENSCVAG00000020144rbm478585.062ENSOPRG00000016507-7585.062Ochotona_princeps
ENSCVAG00000020144rbm479383.898ENSODEG00000004873RBM4710075.421Octodon_degus
ENSCVAG00000020144rbm4710093.830ENSONIG00000009061rbm4710090.476Oreochromis_niloticus
ENSCVAG00000020144rbm4710081.658ENSOANG00000008978RBM4710076.480Ornithorhynchus_anatinus
ENSCVAG00000020144rbm4710080.307ENSOCUG00000012034RBM4710076.303Oryctolagus_cuniculus
ENSCVAG00000020144rbm4710092.564ENSORLG00000005847rbm4710092.564Oryzias_latipes
ENSCVAG00000020144rbm4710092.564ENSORLG00020005154rbm4710092.564Oryzias_latipes_hni
ENSCVAG00000020144rbm4710092.821ENSORLG00015000066rbm4710092.821Oryzias_latipes_hsok
ENSCVAG00000020144rbm4710092.031ENSOMEG00000010730rbm4710090.492Oryzias_melastigma
ENSCVAG00000020144rbm479385.311ENSOGAG00000029367-10075.712Otolemur_garnettii
ENSCVAG00000020144rbm479379.661ENSOGAG00000025193-10071.044Otolemur_garnettii
ENSCVAG00000020144rbm4710069.133ENSOARG00000012711RBM4710068.571Ovis_aries
ENSCVAG00000020144rbm479384.986ENSPPAG00000029763RBM479880.311Pan_paniscus
ENSCVAG00000020144rbm4710073.862ENSPPRG00000012873RBM479982.400Panthera_pardus
ENSCVAG00000020144rbm478674.553ENSPTIG00000017046RBM4710075.149Panthera_tigris_altaica
ENSCVAG00000020144rbm4710081.117ENSPTRG00000016006RBM479883.880Pan_troglodytes
ENSCVAG00000020144rbm4710081.117ENSPANG00000005980RBM479883.880Papio_anubis
ENSCVAG00000020144rbm479781.043ENSPKIG00000005037rbm4710078.560Paramormyrops_kingsleyae
ENSCVAG00000020144rbm4710078.044ENSPKIG00000013431RBM479878.782Paramormyrops_kingsleyae
ENSCVAG00000020144rbm478883.418ENSPSIG00000017516RBM479780.151Pelodiscus_sinensis
ENSCVAG00000020144rbm4710090.136ENSPMGG00000018540rbm479992.857Periophthalmus_magnuspinnatus
ENSCVAG00000020144rbm4710081.649ENSPEMG00000011088Rbm479684.225Peromyscus_maniculatus_bairdii
ENSCVAG00000020144rbm4710095.455ENSPFOG00000007997rbm4710093.791Poecilia_formosa
ENSCVAG00000020144rbm4710095.202ENSPLAG00000002072rbm4710095.946Poecilia_latipinna
ENSCVAG00000020144rbm4710096.401ENSPMEG00000017492rbm4710096.401Poecilia_mexicana
ENSCVAG00000020144rbm4710096.401ENSPREG00000008456rbm4710096.401Poecilia_reticulata
ENSCVAG00000020144rbm479573.497ENSPPYG00000014688RBM4710067.845Pongo_abelii
ENSCVAG00000020144rbm478978.392ENSPCAG00000011879RBM478183.208Procavia_capensis
ENSCVAG00000020144rbm4710074.368ENSPCOG00000023451RBM479684.136Propithecus_coquereli
ENSCVAG00000020144rbm479383.242ENSPVAG00000003812RBM4710075.753Pteropus_vampyrus
ENSCVAG00000020144rbm4710092.545ENSPNYG00000022868rbm4710089.268Pundamilia_nyererei
ENSCVAG00000020144rbm4710086.189ENSPNAG00000007940rbm4710083.252Pygocentrus_nattereri
ENSCVAG00000020144rbm4710079.188ENSRNOG00000002408Rbm4710075.042Rattus_norvegicus
ENSCVAG00000020144rbm4710082.275ENSRBIG00000039601RBM479883.880Rhinopithecus_bieti
ENSCVAG00000020144rbm4710082.275ENSRROG00000044696RBM479883.880Rhinopithecus_roxellana
ENSCVAG00000020144rbm4710073.862ENSSBOG00000028475RBM4710079.012Saimiri_boliviensis_boliviensis
ENSCVAG00000020144rbm4710082.353ENSSHAG00000017576RBM479686.441Sarcophilus_harrisii
ENSCVAG00000020144rbm4710077.815ENSSFOG00015012445rbm4710077.011Scleropages_formosus
ENSCVAG00000020144rbm479977.983ENSSFOG00015024101RBM479978.365Scleropages_formosus
ENSCVAG00000020144rbm4710091.774ENSSMAG00000009744rbm4710091.774Scophthalmus_maximus
ENSCVAG00000020144rbm4710092.621ENSSDUG00000022684rbm479992.150Seriola_dumerili
ENSCVAG00000020144rbm4710092.621ENSSLDG00000003109rbm4710092.621Seriola_lalandi_dorsalis
ENSCVAG00000020144rbm477579.601ENSSARG00000001735RBM477580.531Sorex_araneus
ENSCVAG00000020144rbm4710084.474ENSSPUG00000007515RBM4710082.447Sphenodon_punctatus
ENSCVAG00000020144rbm4710095.373ENSSPAG00000001257rbm4710095.373Stegastes_partitus
ENSCVAG00000020144rbm479385.352ENSSSCG00000008796RBM4710075.966Sus_scrofa
ENSCVAG00000020144rbm4710082.398ENSTGUG00000008705RBM4710077.554Taeniopygia_guttata
ENSCVAG00000020144rbm4710089.116ENSTRUG00000014050rbm4710089.116Takifugu_rubripes
ENSCVAG00000020144rbm4710088.962ENSTNIG00000006127rbm4710088.962Tetraodon_nigroviridis
ENSCVAG00000020144rbm478183.286ENSTBEG00000001607RBM477680.267Tupaia_belangeri
ENSCVAG00000020144rbm479385.634ENSTTRG00000002839RBM4710076.560Tursiops_truncatus
ENSCVAG00000020144rbm479384.463ENSUAMG00000021346RBM4710075.544Ursus_americanus
ENSCVAG00000020144rbm475286.400ENSVPAG00000000641-5581.481Vicugna_pacos
ENSCVAG00000020144rbm479385.269ENSVVUG00000014774RBM479677.661Vulpes_vulpes
ENSCVAG00000020144rbm4710080.597ENSXETG00000012802rbm4710075.879Xenopus_tropicalis
ENSCVAG00000020144rbm4710091.280ENSXCOG00000000780rbm4710096.486Xiphophorus_couchianus
ENSCVAG00000020144rbm4710096.915ENSXMAG00000009874rbm4710096.915Xiphophorus_maculatus

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