EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000020156 (Gene tree)
Gene ID: 107094198
Gene Symbol: si:ch211-113e8.11
Alias: -
Full Name: uncharacterized LOC107094198
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 3374 bases
Position: chrKL652969.1:151894-155267
Accession: 107094198
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000031122	zf-CCCH	PF00642.24	9.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000025690	-	3286	XM_015389684	ENSCVAP00000031122	244 (aa)	XP_015245170	UPI0007428864

Gene Model

Click here to download ENSCVAG00000020156's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000020156's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000020156	si:ch211-113e8.11	99	59.160	ENSAPOG00000010990	si:ch211-113e8.11	100	62.069	Acanthochromis_polyacanthus
ENSCVAG00000020156	si:ch211-113e8.11	56	67.586	ENSACIG00000011566	si:ch211-113e8.11	94	59.903	Amphilophus_citrinellus
ENSCVAG00000020156	si:ch211-113e8.11	99	61.776	ENSAOCG00000022156	si:ch211-113e8.11	100	63.320	Amphiprion_ocellaris
ENSCVAG00000020156	si:ch211-113e8.11	99	61.390	ENSAPEG00000018284	si:ch211-113e8.11	100	62.934	Amphiprion_percula
ENSCVAG00000020156	si:ch211-113e8.11	99	60.400	ENSATEG00000018391	si:ch211-113e8.11	100	60.400	Anabas_testudineus
ENSCVAG00000020156	si:ch211-113e8.11	99	59.363	ENSACLG00000017011	si:ch211-113e8.11	100	59.600	Astatotilapia_calliptera
ENSCVAG00000020156	si:ch211-113e8.11	97	48.077	ENSAMXG00000000733	si:ch211-113e8.11	97	48.276	Astyanax_mexicanus
ENSCVAG00000020156	si:ch211-113e8.11	99	54.118	ENSCSEG00000004538	si:ch211-113e8.11	99	53.725	Cynoglossus_semilaevis
ENSCVAG00000020156	si:ch211-113e8.11	95	44.856	ENSDARG00000076585	si:ch211-113e8.11	98	48.560	Danio_rerio
ENSCVAG00000020156	si:ch211-113e8.11	59	31.481	FBgn0259728	CG42382	81	31.481	Drosophila_melanogaster
ENSCVAG00000020156	si:ch211-113e8.11	99	53.208	ENSELUG00000001130	si:ch211-113e8.11	100	52.453	Esox_lucius
ENSCVAG00000020156	si:ch211-113e8.11	100	63.158	ENSFHEG00000007870	si:ch211-113e8.11	100	64.777	Fundulus_heteroclitus
ENSCVAG00000020156	si:ch211-113e8.11	99	72.764	ENSGAFG00000020570	si:ch211-113e8.11	100	72.764	Gambusia_affinis
ENSCVAG00000020156	si:ch211-113e8.11	99	58.964	ENSHBUG00000003552	si:ch211-113e8.11	100	59.200	Haplochromis_burtoni
ENSCVAG00000020156	si:ch211-113e8.11	99	52.209	ENSHCOG00000002041	si:ch211-113e8.11	99	50.201	Hippocampus_comes
ENSCVAG00000020156	si:ch211-113e8.11	95	48.739	ENSIPUG00000002260	si:ch211-113e8.11	97	47.967	Ictalurus_punctatus
ENSCVAG00000020156	si:ch211-113e8.11	100	62.948	ENSKMAG00000000086	si:ch211-113e8.11	100	62.550	Kryptolebias_marmoratus
ENSCVAG00000020156	si:ch211-113e8.11	99	49.064	ENSLBEG00000008353	si:ch211-113e8.11	100	50.187	Labrus_bergylta
ENSCVAG00000020156	si:ch211-113e8.11	72	37.895	ENSLACG00000004304	si:ch211-113e8.11	85	41.477	Latimeria_chalumnae
ENSCVAG00000020156	si:ch211-113e8.11	94	54.918	ENSMAMG00000019098	si:ch211-113e8.11	94	57.265	Mastacembelus_armatus
ENSCVAG00000020156	si:ch211-113e8.11	99	60.241	ENSMZEG00005023658	si:ch211-113e8.11	100	61.044	Maylandia_zebra
ENSCVAG00000020156	si:ch211-113e8.11	64	60.123	ENSMMOG00000007254	si:ch211-113e8.11	77	60.123	Mola_mola
ENSCVAG00000020156	si:ch211-113e8.11	99	56.923	ENSMALG00000005110	si:ch211-113e8.11	100	56.538	Monopterus_albus
ENSCVAG00000020156	si:ch211-113e8.11	99	59.761	ENSNBRG00000015060	si:ch211-113e8.11	100	59.600	Neolamprologus_brichardi
ENSCVAG00000020156	si:ch211-113e8.11	99	55.469	ENSORLG00000023699	si:ch211-113e8.11	100	55.469	Oryzias_latipes
ENSCVAG00000020156	si:ch211-113e8.11	99	54.688	ENSORLG00020022094	si:ch211-113e8.11	100	54.688	Oryzias_latipes_hni
ENSCVAG00000020156	si:ch211-113e8.11	99	53.846	ENSORLG00015002588	si:ch211-113e8.11	100	54.980	Oryzias_latipes_hsok
ENSCVAG00000020156	si:ch211-113e8.11	99	56.627	ENSOMEG00000010624	si:ch211-113e8.11	100	57.200	Oryzias_melastigma
ENSCVAG00000020156	si:ch211-113e8.11	54	54.676	ENSPKIG00000023576	si:ch211-113e8.11	87	45.909	Paramormyrops_kingsleyae
ENSCVAG00000020156	si:ch211-113e8.11	95	51.822	ENSPMGG00000018547	si:ch211-113e8.11	97	53.138	Periophthalmus_magnuspinnatus
ENSCVAG00000020156	si:ch211-113e8.11	97	72.500	ENSPFOG00000007950	si:ch211-113e8.11	100	73.967	Poecilia_formosa
ENSCVAG00000020156	si:ch211-113e8.11	99	73.577	ENSPLAG00000002081	si:ch211-113e8.11	100	75.000	Poecilia_latipinna
ENSCVAG00000020156	si:ch211-113e8.11	99	73.171	ENSPMEG00000017505	si:ch211-113e8.11	100	74.597	Poecilia_mexicana
ENSCVAG00000020156	si:ch211-113e8.11	99	73.577	ENSPREG00000008530	si:ch211-113e8.11	100	74.390	Poecilia_reticulata
ENSCVAG00000020156	si:ch211-113e8.11	99	60.159	ENSPNYG00000022856	si:ch211-113e8.11	100	60.000	Pundamilia_nyererei
ENSCVAG00000020156	si:ch211-113e8.11	97	39.759	ENSPNAG00000013782	si:ch211-113e8.11	79	45.596	Pygocentrus_nattereri
ENSCVAG00000020156	si:ch211-113e8.11	96	45.902	ENSSFOG00015000959	si:ch211-113e8.11	97	45.122	Scleropages_formosus
ENSCVAG00000020156	si:ch211-113e8.11	99	56.078	ENSSMAG00000009732	si:ch211-113e8.11	100	57.255	Scophthalmus_maximus
ENSCVAG00000020156	si:ch211-113e8.11	99	60.784	ENSSDUG00000000112	si:ch211-113e8.11	100	61.176	Seriola_dumerili
ENSCVAG00000020156	si:ch211-113e8.11	99	60.000	ENSSLDG00000003287	si:ch211-113e8.11	100	60.000	Seriola_lalandi_dorsalis
ENSCVAG00000020156	si:ch211-113e8.11	99	61.390	ENSSPAG00000001375	si:ch211-113e8.11	100	60.853	Stegastes_partitus
ENSCVAG00000020156	si:ch211-113e8.11	99	49.035	ENSTRUG00000023898	si:ch211-113e8.11	99	51.575	Takifugu_rubripes
ENSCVAG00000020156	si:ch211-113e8.11	99	74.597	ENSXMAG00000024104	si:ch211-113e8.11	100	75.403	Xiphophorus_maculatus