EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000020160 (Gene tree)
Gene ID: 107086301
Gene Symbol: atxn2
Alias: si:dkey-165i4.1
Full Name: ataxin 2
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 25922 bases
Position: chrKL652647.1:767464-793385
Accession: 107086301
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000031036	PAM2	PF07145.15	7e-06	1	1
ENSCVAP00000016981	PAM2	PF07145.15	7e-06	1	1
ENSCVAP00000031004	PAM2	PF07145.15	7e-06	1	1
ENSCVAP00000016995	PAM2	PF07145.15	7e-06	1	1
ENSCVAP00000031036	LsmAD	PF06741.13	1.7e-15	1	1
ENSCVAP00000016981	LsmAD	PF06741.13	1.7e-15	1	1
ENSCVAP00000016995	LsmAD	PF06741.13	1.7e-15	1	1
ENSCVAP00000031004	LsmAD	PF06741.13	2.3e-15	1	1
ENSCVAP00000031036	SM-ATX	PF14438.6	6.1e-19	1	1
ENSCVAP00000016995	SM-ATX	PF14438.6	6.2e-19	1	1
ENSCVAP00000016981	SM-ATX	PF14438.6	6.7e-19	1	1
ENSCVAP00000031004	SM-ATX	PF14438.6	2.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000025515	-	4302	XM_015377153	ENSCVAP00000016981	1039 (aa)	XP_015232639	-
ENSCVAT00000025571	-	4299	XM_015377154	ENSCVAP00000031036	1038 (aa)	XP_015232640	-
ENSCVAT00000032101	-	3351	-	ENSCVAP00000031004	1116 (aa)	-	-
ENSCVAT00000032126	-	4317	XM_015377151	ENSCVAP00000016995	1044 (aa)	XP_015232637	UPI000742754E

Gene Model

Click here to download ENSCVAG00000020160's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000020160's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000020160	atxn2	96	69.153	ENSG00000204842	ATXN2	96	67.532	Homo_sapiens
ENSCVAG00000020160	atxn2	100	87.784	ENSAPOG00000014663	atxn2	97	88.201	Acanthochromis_polyacanthus
ENSCVAG00000020160	atxn2	97	68.852	ENSAMEG00000013747	ATXN2	96	66.565	Ailuropoda_melanoleuca
ENSCVAG00000020160	atxn2	94	77.557	ENSACIG00000004928	atxn2	99	77.923	Amphilophus_citrinellus
ENSCVAG00000020160	atxn2	99	88.377	ENSAOCG00000001107	atxn2	97	87.965	Amphiprion_ocellaris
ENSCVAG00000020160	atxn2	99	88.643	ENSAPEG00000020250	atxn2	97	88.063	Amphiprion_percula
ENSCVAG00000020160	atxn2	93	91.039	ENSATEG00000018587	atxn2	93	91.039	Anabas_testudineus
ENSCVAG00000020160	atxn2	97	70.915	ENSAPLG00000008724	ATXN2	96	68.485	Anas_platyrhynchos
ENSCVAG00000020160	atxn2	97	68.954	ENSACAG00000002419	ATXN2	96	66.667	Anolis_carolinensis
ENSCVAG00000020160	atxn2	97	68.932	ENSANAG00000022522	ATXN2	96	67.208	Aotus_nancymaae
ENSCVAG00000020160	atxn2	86	88.530	ENSACLG00000013359	atxn2	96	77.684	Astatotilapia_calliptera
ENSCVAG00000020160	atxn2	99	69.972	ENSAMXG00000002342	atxn2	95	75.779	Astyanax_mexicanus
ENSCVAG00000020160	atxn2	95	70.775	ENSBTAG00000022069	ATXN2	96	68.182	Bos_taurus
ENSCVAG00000020160	atxn2	97	68.790	ENSCJAG00000011756	ATXN2	99	59.030	Callithrix_jacchus
ENSCVAG00000020160	atxn2	96	69.831	ENSCAFG00000008606	ATXN2	79	67.066	Canis_familiaris
ENSCVAG00000020160	atxn2	95	70.775	ENSCAFG00020017041	ATXN2	96	68.182	Canis_lupus_dingo
ENSCVAG00000020160	atxn2	97	68.354	ENSCHIG00000012141	ATXN2	79	67.492	Capra_hircus
ENSCVAG00000020160	atxn2	96	69.508	ENSTSYG00000002717	ATXN2	96	67.857	Carlito_syrichta
ENSCVAG00000020160	atxn2	73	80.531	ENSCAPG00000013332	ATXN2	88	80.531	Cavia_aperea
ENSCVAG00000020160	atxn2	97	69.453	ENSCPOG00000001390	ATXN2	92	67.094	Cavia_porcellus
ENSCVAG00000020160	atxn2	97	68.910	ENSCCAG00000026267	ATXN2	96	67.208	Cebus_capucinus
ENSCVAG00000020160	atxn2	96	69.153	ENSCATG00000017877	ATXN2	96	62.338	Cercocebus_atys
ENSCVAG00000020160	atxn2	97	69.608	ENSCLAG00000009324	ATXN2	94	67.273	Chinchilla_lanigera
ENSCVAG00000020160	atxn2	96	69.153	ENSCSAG00000002590	ATXN2	90	66.866	Chlorocebus_sabaeus
ENSCVAG00000020160	atxn2	76	62.085	ENSCHOG00000004284	ATXN2	83	62.085	Choloepus_hoffmanni
ENSCVAG00000020160	atxn2	88	68.198	ENSCPBG00000003465	ATXN2	100	57.905	Chrysemys_picta_bellii
ENSCVAG00000020160	atxn2	96	69.180	ENSCANG00000042302	ATXN2	96	67.532	Colobus_angolensis_palliatus
ENSCVAG00000020160	atxn2	95	61.301	ENSCGRG00001022603	Atxn2	80	59.581	Cricetulus_griseus_chok1gshd
ENSCVAG00000020160	atxn2	97	68.932	ENSCGRG00000015823	Atxn2	95	66.667	Cricetulus_griseus_crigri
ENSCVAG00000020160	atxn2	100	80.875	ENSCSEG00000009072	-	100	81.446	Cynoglossus_semilaevis
ENSCVAG00000020160	atxn2	100	81.956	ENSCSEG00000018366	atxn2	97	82.893	Cynoglossus_semilaevis
ENSCVAG00000020160	atxn2	100	79.646	ENSDARG00000052897	atxn2	93	77.439	Danio_rerio
ENSCVAG00000020160	atxn2	96	68.562	ENSDNOG00000015696	ATXN2	95	67.630	Dasypus_novemcinctus
ENSCVAG00000020160	atxn2	96	59.344	ENSDORG00000000808	Atxn2	96	56.805	Dipodomys_ordii
ENSCVAG00000020160	atxn2	90	59.804	ENSETEG00000005224	ATXN2	76	58.621	Echinops_telfairi
ENSCVAG00000020160	atxn2	97	69.935	ENSEASG00005012077	ATXN2	97	69.065	Equus_asinus_asinus
ENSCVAG00000020160	atxn2	97	70.033	ENSECAG00000014347	ATXN2	77	67.463	Equus_caballus
ENSCVAG00000020160	atxn2	74	69.180	ENSEEUG00000014635	-	71	69.180	Erinaceus_europaeus
ENSCVAG00000020160	atxn2	99	70.293	ENSELUG00000019632	atxn2	97	69.854	Esox_lucius
ENSCVAG00000020160	atxn2	96	69.831	ENSFCAG00000003178	ATXN2	96	62.987	Felis_catus
ENSCVAG00000020160	atxn2	92	57.835	ENSFALG00000009001	ATXN2	99	59.013	Ficedula_albicollis
ENSCVAG00000020160	atxn2	96	70.164	ENSFDAG00000020942	ATXN2	96	67.781	Fukomys_damarensis
ENSCVAG00000020160	atxn2	91	91.291	ENSFHEG00000019561	atxn2	98	91.760	Fundulus_heteroclitus
ENSCVAG00000020160	atxn2	88	89.583	ENSGMOG00000007412	atxn2	86	89.619	Gadus_morhua
ENSCVAG00000020160	atxn2	97	66.124	ENSGALG00000004625	ATXN2	96	65.385	Gallus_gallus
ENSCVAG00000020160	atxn2	94	94.097	ENSGAFG00000003302	atxn2	97	90.208	Gambusia_affinis
ENSCVAG00000020160	atxn2	95	91.319	ENSGACG00000006295	atxn2	95	91.319	Gasterosteus_aculeatus
ENSCVAG00000020160	atxn2	88	69.424	ENSGAGG00000005014	ATXN2	100	58.934	Gopherus_agassizii
ENSCVAG00000020160	atxn2	95	70.070	ENSGGOG00000002137	ATXN2	96	67.532	Gorilla_gorilla
ENSCVAG00000020160	atxn2	99	84.327	ENSHBUG00000002921	atxn2	95	88.278	Haplochromis_burtoni
ENSCVAG00000020160	atxn2	96	55.045	ENSHGLG00000009812	ATXN2	83	56.436	Heterocephalus_glaber_female
ENSCVAG00000020160	atxn2	96	70.164	ENSHGLG00100019351	ATXN2	96	67.781	Heterocephalus_glaber_male
ENSCVAG00000020160	atxn2	99	79.810	ENSHCOG00000005278	atxn2	91	83.746	Hippocampus_comes
ENSCVAG00000020160	atxn2	97	67.278	ENSIPUG00000016649	atxn2	95	73.469	Ictalurus_punctatus
ENSCVAG00000020160	atxn2	96	69.836	ENSSTOG00000000978	ATXN2	96	58.501	Ictidomys_tridecemlineatus
ENSCVAG00000020160	atxn2	100	85.701	ENSKMAG00000000980	atxn2	97	86.049	Kryptolebias_marmoratus
ENSCVAG00000020160	atxn2	59	75.929	ENSLBEG00000017484	atxn2	90	76.701	Labrus_bergylta
ENSCVAG00000020160	atxn2	97	74.183	ENSLACG00000012531	ATXN2	96	71.515	Latimeria_chalumnae
ENSCVAG00000020160	atxn2	97	78.896	ENSLOCG00000007880	atxn2	94	74.926	Lepisosteus_oculatus
ENSCVAG00000020160	atxn2	97	70.588	ENSLAFG00000007416	ATXN2	94	70.588	Loxodonta_africana
ENSCVAG00000020160	atxn2	96	69.153	ENSMFAG00000000374	ATXN2	96	67.532	Macaca_fascicularis
ENSCVAG00000020160	atxn2	95	70.070	ENSMMUG00000002226	ATXN2	96	67.532	Macaca_mulatta
ENSCVAG00000020160	atxn2	96	69.153	ENSMNEG00000035588	ATXN2	96	67.532	Macaca_nemestrina
ENSCVAG00000020160	atxn2	96	69.180	ENSMLEG00000024324	ATXN2	96	67.532	Mandrillus_leucophaeus
ENSCVAG00000020160	atxn2	99	85.271	ENSMAMG00000019160	atxn2	96	86.183	Mastacembelus_armatus
ENSCVAG00000020160	atxn2	99	84.327	ENSMZEG00005008476	atxn2	94	88.645	Maylandia_zebra
ENSCVAG00000020160	atxn2	97	70.588	ENSMGAG00000005288	ATXN2	96	68.182	Meleagris_gallopavo
ENSCVAG00000020160	atxn2	66	54.661	ENSMAUG00000008223	-	99	53.923	Mesocricetus_auratus
ENSCVAG00000020160	atxn2	95	70.423	ENSMICG00000013541	ATXN2	96	67.857	Microcebus_murinus
ENSCVAG00000020160	atxn2	83	56.646	ENSMOCG00000005219	Atxn2	92	67.521	Microtus_ochrogaster
ENSCVAG00000020160	atxn2	94	77.085	ENSMMOG00000013189	atxn2	99	76.700	Mola_mola
ENSCVAG00000020160	atxn2	98	67.702	ENSMODG00000012221	ATXN2	83	57.876	Monodelphis_domestica
ENSCVAG00000020160	atxn2	99	84.073	ENSMALG00000018529	atxn2	96	83.582	Monopterus_albus
ENSCVAG00000020160	atxn2	95	68.259	MGP_CAROLIEiJ_G0027692	Atxn2	98	67.227	Mus_caroli
ENSCVAG00000020160	atxn2	95	68.601	ENSMUSG00000042605	Atxn2	97	68.067	Mus_musculus
ENSCVAG00000020160	atxn2	97	53.138	MGP_PahariEiJ_G0024272	Atxn2	99	52.782	Mus_pahari
ENSCVAG00000020160	atxn2	95	68.601	MGP_SPRETEiJ_G0028690	Atxn2	98	68.067	Mus_spretus
ENSCVAG00000020160	atxn2	97	63.279	ENSMPUG00000002212	ATXN2	96	61.398	Mustela_putorius_furo
ENSCVAG00000020160	atxn2	97	70.130	ENSMLUG00000015559	ATXN2	96	67.771	Myotis_lucifugus
ENSCVAG00000020160	atxn2	86	89.964	ENSNBRG00000015794	atxn2	99	80.508	Neolamprologus_brichardi
ENSCVAG00000020160	atxn2	98	67.192	ENSNLEG00000000484	ATXN2	96	67.532	Nomascus_leucogenys
ENSCVAG00000020160	atxn2	82	73.885	ENSMEUG00000012244	-	73	64.375	Notamacropus_eugenii
ENSCVAG00000020160	atxn2	95	61.433	ENSOPRG00000014599	ATXN2	96	59.621	Ochotona_princeps
ENSCVAG00000020160	atxn2	95	69.718	ENSODEG00000010798	ATXN2	96	67.208	Octodon_degus
ENSCVAG00000020160	atxn2	96	90.523	ENSONIG00000014521	atxn2	94	90.523	Oreochromis_niloticus
ENSCVAG00000020160	atxn2	82	77.070	ENSOANG00000004796	ATXN2	95	71.823	Ornithorhynchus_anatinus
ENSCVAG00000020160	atxn2	97	68.301	ENSOCUG00000002855	ATXN2	67	66.061	Oryctolagus_cuniculus
ENSCVAG00000020160	atxn2	94	81.395	ENSORLG00000003606	atxn2	99	85.252	Oryzias_latipes
ENSCVAG00000020160	atxn2	99	80.115	ENSORLG00020000785	atxn2	97	81.158	Oryzias_latipes_hni
ENSCVAG00000020160	atxn2	99	80.614	ENSORLG00015012345	atxn2	97	80.765	Oryzias_latipes_hsok
ENSCVAG00000020160	atxn2	99	82.150	ENSOMEG00000020080	atxn2	97	81.827	Oryzias_melastigma
ENSCVAG00000020160	atxn2	96	69.153	ENSOGAG00000000609	ATXN2	80	66.866	Otolemur_garnettii
ENSCVAG00000020160	atxn2	97	69.805	ENSOARG00000018223	ATXN2	96	67.470	Ovis_aries
ENSCVAG00000020160	atxn2	97	69.256	ENSPPAG00000028043	ATXN2	96	67.532	Pan_paniscus
ENSCVAG00000020160	atxn2	96	69.831	ENSPPRG00000003573	ATXN2	96	62.987	Panthera_pardus
ENSCVAG00000020160	atxn2	95	70.775	ENSPTIG00000021122	ATXN2	96	68.182	Panthera_tigris_altaica
ENSCVAG00000020160	atxn2	98	67.405	ENSPTRG00000029540	ATXN2	96	67.532	Pan_troglodytes
ENSCVAG00000020160	atxn2	95	70.070	ENSPANG00000017168	ATXN2	96	67.532	Papio_anubis
ENSCVAG00000020160	atxn2	97	71.540	ENSPKIG00000023134	atxn2	97	70.927	Paramormyrops_kingsleyae
ENSCVAG00000020160	atxn2	97	71.242	ENSPSIG00000002353	-	96	68.788	Pelodiscus_sinensis
ENSCVAG00000020160	atxn2	95	87.455	ENSPMGG00000005074	atxn2	95	87.455	Periophthalmus_magnuspinnatus
ENSCVAG00000020160	atxn2	83	56.660	ENSPEMG00000015340	Atxn2	92	67.094	Peromyscus_maniculatus_bairdii
ENSCVAG00000020160	atxn2	64	50.323	ENSPMAG00000004603	atxn2	66	54.789	Petromyzon_marinus
ENSCVAG00000020160	atxn2	59	51.943	ENSPMAG00000007157	atxn2	81	38.129	Petromyzon_marinus
ENSCVAG00000020160	atxn2	59	67.117	ENSPCIG00000006165	-	94	71.978	Phascolarctos_cinereus
ENSCVAG00000020160	atxn2	97	80.136	ENSPFOG00000005857	atxn2	97	80.214	Poecilia_formosa
ENSCVAG00000020160	atxn2	100	90.595	ENSPLAG00000015241	atxn2	97	90.208	Poecilia_latipinna
ENSCVAG00000020160	atxn2	100	90.595	ENSPMEG00000016681	atxn2	97	90.208	Poecilia_mexicana
ENSCVAG00000020160	atxn2	95	93.380	ENSPREG00000014825	atxn2	95	93.380	Poecilia_reticulata
ENSCVAG00000020160	atxn2	96	68.814	ENSPPYG00000004963	ATXN2	83	66.567	Pongo_abelii
ENSCVAG00000020160	atxn2	94	68.345	ENSPCOG00000022031	ATXN2	96	66.667	Propithecus_coquereli
ENSCVAG00000020160	atxn2	96	69.831	ENSPVAG00000013179	ATXN2	79	67.164	Pteropus_vampyrus
ENSCVAG00000020160	atxn2	60	70.927	ENSPNYG00000016981	atxn2	95	71.074	Pundamilia_nyererei
ENSCVAG00000020160	atxn2	100	72.693	ENSPNAG00000010889	atxn2	97	72.222	Pygocentrus_nattereri
ENSCVAG00000020160	atxn2	97	68.608	ENSRNOG00000001256	Atxn2	95	66.366	Rattus_norvegicus
ENSCVAG00000020160	atxn2	95	67.254	ENSRBIG00000039212	ATXN2	96	64.935	Rhinopithecus_bieti
ENSCVAG00000020160	atxn2	96	69.180	ENSRROG00000031170	ATXN2	96	67.532	Rhinopithecus_roxellana
ENSCVAG00000020160	atxn2	95	69.718	ENSSBOG00000031563	ATXN2	96	67.208	Saimiri_boliviensis_boliviensis
ENSCVAG00000020160	atxn2	97	69.481	ENSSHAG00000007304	ATXN2	96	67.169	Sarcophilus_harrisii
ENSCVAG00000020160	atxn2	95	78.495	ENSSFOG00015017229	atxn2	98	72.086	Scleropages_formosus
ENSCVAG00000020160	atxn2	99	86.680	ENSSMAG00000004627	atxn2	97	86.332	Scophthalmus_maximus
ENSCVAG00000020160	atxn2	100	86.410	ENSSDUG00000001223	atxn2	94	91.209	Seriola_dumerili
ENSCVAG00000020160	atxn2	93	92.832	ENSSLDG00000019837	atxn2	99	77.381	Seriola_lalandi_dorsalis
ENSCVAG00000020160	atxn2	69	67.901	ENSSARG00000006291	ATXN2	67	68.182	Sorex_araneus
ENSCVAG00000020160	atxn2	95	69.900	ENSSPUG00000010317	ATXN2	88	67.492	Sphenodon_punctatus
ENSCVAG00000020160	atxn2	99	88.643	ENSSPAG00000000377	atxn2	95	88.194	Stegastes_partitus
ENSCVAG00000020160	atxn2	96	69.608	ENSSSCG00000009834	ATXN2	91	67.164	Sus_scrofa
ENSCVAG00000020160	atxn2	97	57.423	ENSTGUG00000006497	ATXN2	100	56.929	Taeniopygia_guttata
ENSCVAG00000020160	atxn2	94	79.818	ENSTRUG00000016801	atxn2	96	80.312	Takifugu_rubripes
ENSCVAG00000020160	atxn2	83	68.462	ENSTBEG00000001985	ATXN2	83	68.462	Tupaia_belangeri
ENSCVAG00000020160	atxn2	84	66.441	ENSTTRG00000000952	ATXN2	75	62.884	Tursiops_truncatus
ENSCVAG00000020160	atxn2	96	69.153	ENSUAMG00000025295	ATXN2	90	66.467	Ursus_americanus
ENSCVAG00000020160	atxn2	95	70.070	ENSUMAG00000007315	ATXN2	96	67.532	Ursus_maritimus
ENSCVAG00000020160	atxn2	86	69.963	ENSVPAG00000005940	ATXN2	86	67.340	Vicugna_pacos
ENSCVAG00000020160	atxn2	95	70.775	ENSVVUG00000016107	ATXN2	96	68.182	Vulpes_vulpes
ENSCVAG00000020160	atxn2	95	55.373	ENSXETG00000020912	atxn2	99	56.375	Xenopus_tropicalis
ENSCVAG00000020160	atxn2	59	82.055	ENSXCOG00000010001	atxn2	99	83.115	Xiphophorus_couchianus
ENSCVAG00000020160	atxn2	97	89.229	ENSXMAG00000003481	atxn2	97	89.625	Xiphophorus_maculatus