EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000020169 (Gene tree)
Gene ID: 107096400
Gene Symbol: mrps18c
Alias: si:ch211-85e10.6
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 3772 bases
Position: chrKL653121.1:431865-435636
Accession: 107096400
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000017127	Ribosomal_S18	PF01084.20	7e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000032211	-	1549	XM_015393034	ENSCVAP00000017127	127 (aa)	XP_015248520	UPI0007425215

Gene Model

Click here to download ENSCVAG00000020169's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000020169's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000020169	mrps18c	100	66.667	ENSAPOG00000019045	mrps18c	100	66.667	Acanthochromis_polyacanthus
ENSCVAG00000020169	mrps18c	73	77.419	ENSACIG00000020253	mrps18c	92	77.419	Amphilophus_citrinellus
ENSCVAG00000020169	mrps18c	100	67.442	ENSAOCG00000014338	mrps18c	100	67.442	Amphiprion_ocellaris
ENSCVAG00000020169	mrps18c	69	82.759	ENSAPEG00000023068	-	87	79.348	Amphiprion_percula
ENSCVAG00000020169	mrps18c	100	65.891	ENSAPEG00000022956	mrps18c	100	65.891	Amphiprion_percula
ENSCVAG00000020169	mrps18c	100	69.231	ENSATEG00000023417	mrps18c	100	69.231	Anabas_testudineus
ENSCVAG00000020169	mrps18c	70	62.921	ENSAPLG00000012544	-	86	62.921	Anas_platyrhynchos
ENSCVAG00000020169	mrps18c	72	83.696	ENSACLG00000010521	mrps18c	90	83.696	Astatotilapia_calliptera
ENSCVAG00000020169	mrps18c	72	76.923	ENSAMXG00000012238	mrps18c	92	76.923	Astyanax_mexicanus
ENSCVAG00000020169	mrps18c	70	65.169	ENSCPBG00000007783	-	55	65.169	Chrysemys_picta_bellii
ENSCVAG00000020169	mrps18c	75	72.632	ENSCSEG00000000711	mrps18c	91	57.576	Cynoglossus_semilaevis
ENSCVAG00000020169	mrps18c	81	64.151	ENSDARG00000069624	mrps18c	78	64.151	Danio_rerio
ENSCVAG00000020169	mrps18c	83	65.741	ENSELUG00000024603	mrps18c	81	65.741	Esox_lucius
ENSCVAG00000020169	mrps18c	100	82.031	ENSFHEG00000018752	-	100	82.031	Fundulus_heteroclitus
ENSCVAG00000020169	mrps18c	100	82.031	ENSFHEG00000015550	mrps18c	95	82.031	Fundulus_heteroclitus
ENSCVAG00000020169	mrps18c	77	61.224	ENSGALG00000023191	MRPS18C	67	61.224	Gallus_gallus
ENSCVAG00000020169	mrps18c	100	75.000	ENSGAFG00000008048	mrps18c	83	75.000	Gambusia_affinis
ENSCVAG00000020169	mrps18c	70	66.292	ENSGAGG00000015144	-	63	66.292	Gopherus_agassizii
ENSCVAG00000020169	mrps18c	100	70.769	ENSHBUG00000002008	mrps18c	100	70.769	Haplochromis_burtoni
ENSCVAG00000020169	mrps18c	88	69.828	ENSHCOG00000013161	mrps18c	88	69.828	Hippocampus_comes
ENSCVAG00000020169	mrps18c	72	69.231	ENSIPUG00000003783	mrps18c	88	69.231	Ictalurus_punctatus
ENSCVAG00000020169	mrps18c	100	70.312	ENSKMAG00000016467	mrps18c	100	70.312	Kryptolebias_marmoratus
ENSCVAG00000020169	mrps18c	100	66.923	ENSLBEG00000021861	mrps18c	100	66.923	Labrus_bergylta
ENSCVAG00000020169	mrps18c	100	66.923	ENSLBEG00000019174	mrps18c	100	66.923	Labrus_bergylta
ENSCVAG00000020169	mrps18c	98	53.030	ENSLACG00000011243	mrps18c	100	53.030	Latimeria_chalumnae
ENSCVAG00000020169	mrps18c	94	56.589	ENSLOCG00000012115	mrps18c	95	56.589	Lepisosteus_oculatus
ENSCVAG00000020169	mrps18c	100	60.448	ENSMAMG00000012386	mrps18c	100	60.448	Mastacembelus_armatus
ENSCVAG00000020169	mrps18c	100	70.769	ENSMZEG00005023278	mrps18c	100	70.769	Maylandia_zebra
ENSCVAG00000020169	mrps18c	72	80.435	ENSMMOG00000011316	mrps18c	70	80.435	Mola_mola
ENSCVAG00000020169	mrps18c	100	70.769	ENSNBRG00000006182	mrps18c	100	70.769	Neolamprologus_brichardi
ENSCVAG00000020169	mrps18c	68	66.279	ENSMEUG00000010972	-	68	66.279	Notamacropus_eugenii
ENSCVAG00000020169	mrps18c	100	69.231	ENSONIG00000012527	mrps18c	91	81.522	Oreochromis_niloticus
ENSCVAG00000020169	mrps18c	100	65.116	ENSORLG00015006869	mrps18c	100	65.116	Oryzias_latipes_hsok
ENSCVAG00000020169	mrps18c	69	76.136	ENSOMEG00000005009	mrps18c	85	76.136	Oryzias_melastigma
ENSCVAG00000020169	mrps18c	100	56.204	ENSPKIG00000021736	mrps18c	100	56.204	Paramormyrops_kingsleyae
ENSCVAG00000020169	mrps18c	72	79.121	ENSPMGG00000002991	mrps18c	92	79.121	Periophthalmus_magnuspinnatus
ENSCVAG00000020169	mrps18c	100	75.000	ENSPFOG00000002351	mrps18c	83	75.000	Poecilia_formosa
ENSCVAG00000020169	mrps18c	100	75.000	ENSPLAG00000015187	mrps18c	100	75.000	Poecilia_latipinna
ENSCVAG00000020169	mrps18c	100	74.219	ENSPMEG00000014488	mrps18c	83	74.219	Poecilia_mexicana
ENSCVAG00000020169	mrps18c	67	83.529	ENSPREG00000012593	mrps18c	87	83.529	Poecilia_reticulata
ENSCVAG00000020169	mrps18c	100	70.000	ENSPNYG00000010654	mrps18c	100	70.000	Pundamilia_nyererei
ENSCVAG00000020169	mrps18c	72	70.330	ENSPNAG00000009350	mrps18c	85	70.330	Pygocentrus_nattereri
ENSCVAG00000020169	mrps18c	83	63.889	ENSSFOG00015019444	mrps18c	79	63.889	Scleropages_formosus
ENSCVAG00000020169	mrps18c	100	66.406	ENSSDUG00000015676	mrps18c	100	66.406	Seriola_dumerili
ENSCVAG00000020169	mrps18c	96	64.754	ENSSLDG00000002034	mrps18c	91	64.754	Seriola_lalandi_dorsalis
ENSCVAG00000020169	mrps18c	80	59.804	ENSSPUG00000013990	-	72	59.804	Sphenodon_punctatus
ENSCVAG00000020169	mrps18c	99	61.719	ENSSPAG00000008687	mrps18c	99	61.719	Stegastes_partitus
ENSCVAG00000020169	mrps18c	100	60.000	ENSTRUG00000024403	mrps18c	100	60.000	Takifugu_rubripes
ENSCVAG00000020169	mrps18c	100	60.769	ENSTNIG00000005674	mrps18c	100	60.769	Tetraodon_nigroviridis
ENSCVAG00000020169	mrps18c	66	71.429	ENSXETG00000027597	mrps18c	64	71.429	Xenopus_tropicalis
ENSCVAG00000020169	mrps18c	100	70.866	ENSXCOG00000016208	mrps18c	87	83.908	Xiphophorus_couchianus
ENSCVAG00000020169	mrps18c	100	75.000	ENSXMAG00000012555	mrps18c	83	75.000	Xiphophorus_maculatus