EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000020285 (Gene tree)
Gene ID: 107092959
Gene Symbol: tnpo3
Alias: zgc:55409
Full Name: transportin 3
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 21030 bases
Position: chrKL652902.1:461352-482381
Accession: 107092959
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000017131	Xpo1	PF08389.12	4.7e-27	1	1
ENSCVAP00000017131	IBN_N	PF03810.19	7.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000025696	-	3630	XM_015387708	ENSCVAP00000017131	923 (aa)	XP_015243194	UPI0007429DC8

Gene Model

Click here to download ENSCVAG00000020285's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000020285's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000020285	tnpo3	100	85.699	ENSG00000064419	TNPO3	100	85.764	Homo_sapiens
ENSCVAG00000020285	tnpo3	100	95.450	ENSAPOG00000018347	tnpo3	100	95.450	Acanthochromis_polyacanthus
ENSCVAG00000020285	tnpo3	99	82.668	ENSAMEG00000005135	TNPO3	98	82.668	Ailuropoda_melanoleuca
ENSCVAG00000020285	tnpo3	96	92.551	ENSACIG00000005897	tnpo3	100	91.937	Amphilophus_citrinellus
ENSCVAG00000020285	tnpo3	100	95.341	ENSAOCG00000008264	tnpo3	100	95.341	Amphiprion_ocellaris
ENSCVAG00000020285	tnpo3	96	95.470	ENSAPEG00000024300	tnpo3	100	95.470	Amphiprion_percula
ENSCVAG00000020285	tnpo3	100	95.125	ENSATEG00000003197	tnpo3	100	95.125	Anabas_testudineus
ENSCVAG00000020285	tnpo3	72	83.443	ENSAPLG00000005946	TNPO3	91	83.443	Anas_platyrhynchos
ENSCVAG00000020285	tnpo3	82	85.658	ENSACAG00000013470	TNPO3	95	85.658	Anolis_carolinensis
ENSCVAG00000020285	tnpo3	100	85.699	ENSANAG00000037940	TNPO3	100	85.699	Aotus_nancymaae
ENSCVAG00000020285	tnpo3	100	94.475	ENSACLG00000005561	tnpo3	100	94.475	Astatotilapia_calliptera
ENSCVAG00000020285	tnpo3	100	91.766	ENSAMXG00000016236	tnpo3	100	91.766	Astyanax_mexicanus
ENSCVAG00000020285	tnpo3	100	85.590	ENSBTAG00000004992	TNPO3	100	85.648	Bos_taurus
ENSCVAG00000020285	tnpo3	100	85.807	ENSCJAG00000018085	TNPO3	100	85.807	Callithrix_jacchus
ENSCVAG00000020285	tnpo3	100	85.699	ENSCAFG00000001543	TNPO3	100	85.699	Canis_familiaris
ENSCVAG00000020285	tnpo3	100	85.699	ENSCAFG00020022462	TNPO3	99	85.297	Canis_lupus_dingo
ENSCVAG00000020285	tnpo3	100	85.699	ENSCHIG00000011721	TNPO3	100	85.699	Capra_hircus
ENSCVAG00000020285	tnpo3	100	85.807	ENSTSYG00000002989	TNPO3	100	85.807	Carlito_syrichta
ENSCVAG00000020285	tnpo3	72	84.946	ENSCAPG00000005843	TNPO3	91	84.946	Cavia_aperea
ENSCVAG00000020285	tnpo3	100	85.374	ENSCPOG00000039784	TNPO3	100	85.374	Cavia_porcellus
ENSCVAG00000020285	tnpo3	100	85.807	ENSCCAG00000033826	TNPO3	100	85.881	Cebus_capucinus
ENSCVAG00000020285	tnpo3	100	85.699	ENSCATG00000030018	TNPO3	100	85.764	Cercocebus_atys
ENSCVAG00000020285	tnpo3	100	84.574	ENSCLAG00000016298	TNPO3	100	84.574	Chinchilla_lanigera
ENSCVAG00000020285	tnpo3	100	85.807	ENSCSAG00000009966	TNPO3	100	85.807	Chlorocebus_sabaeus
ENSCVAG00000020285	tnpo3	99	60.568	ENSCHOG00000011547	TNPO3	99	60.568	Choloepus_hoffmanni
ENSCVAG00000020285	tnpo3	93	85.298	ENSCPBG00000017497	TNPO3	100	85.298	Chrysemys_picta_bellii
ENSCVAG00000020285	tnpo3	99	49.346	ENSCING00000005042	-	99	49.346	Ciona_intestinalis
ENSCVAG00000020285	tnpo3	99	48.205	ENSCSAVG00000008623	-	95	55.235	Ciona_savignyi
ENSCVAG00000020285	tnpo3	100	85.699	ENSCANG00000033070	TNPO3	100	85.764	Colobus_angolensis_palliatus
ENSCVAG00000020285	tnpo3	100	85.590	ENSCGRG00001015925	Tnpo3	100	85.590	Cricetulus_griseus_chok1gshd
ENSCVAG00000020285	tnpo3	100	85.590	ENSCGRG00000010379	Tnpo3	100	85.590	Cricetulus_griseus_crigri
ENSCVAG00000020285	tnpo3	100	92.958	ENSCSEG00000005952	tnpo3	100	92.958	Cynoglossus_semilaevis
ENSCVAG00000020285	tnpo3	100	91.224	ENSDARG00000045680	tnpo3	100	91.224	Danio_rerio
ENSCVAG00000020285	tnpo3	100	85.590	ENSDNOG00000002556	TNPO3	100	85.590	Dasypus_novemcinctus
ENSCVAG00000020285	tnpo3	62	85.147	ENSDORG00000002433	Tnpo3	95	85.147	Dipodomys_ordii
ENSCVAG00000020285	tnpo3	99	43.057	FBgn0031456	Tnpo-SR	99	43.057	Drosophila_melanogaster
ENSCVAG00000020285	tnpo3	95	85.714	ENSETEG00000002101	TNPO3	90	85.714	Echinops_telfairi
ENSCVAG00000020285	tnpo3	99	71.304	ENSEBUG00000016931	tnpo3	99	71.304	Eptatretus_burgeri
ENSCVAG00000020285	tnpo3	100	85.590	ENSEASG00005008677	TNPO3	100	85.590	Equus_asinus_asinus
ENSCVAG00000020285	tnpo3	100	85.590	ENSECAG00000012815	TNPO3	100	85.648	Equus_caballus
ENSCVAG00000020285	tnpo3	99	80.426	ENSEEUG00000005178	TNPO3	98	80.426	Erinaceus_europaeus
ENSCVAG00000020285	tnpo3	99	92.383	ENSELUG00000012153	tnpo3	99	92.383	Esox_lucius
ENSCVAG00000020285	tnpo3	100	85.699	ENSFCAG00000018186	TNPO3	100	85.764	Felis_catus
ENSCVAG00000020285	tnpo3	95	81.341	ENSFALG00000010667	TNPO3	99	81.341	Ficedula_albicollis
ENSCVAG00000020285	tnpo3	100	85.297	ENSFDAG00000019578	TNPO3	100	85.297	Fukomys_damarensis
ENSCVAG00000020285	tnpo3	99	98.587	ENSFHEG00000012859	tnpo3	99	98.587	Fundulus_heteroclitus
ENSCVAG00000020285	tnpo3	100	92.308	ENSGMOG00000007324	tnpo3	100	92.308	Gadus_morhua
ENSCVAG00000020285	tnpo3	61	85.336	ENSGALG00000039420	TNPO3	99	85.336	Gallus_gallus
ENSCVAG00000020285	tnpo3	100	94.041	ENSGACG00000000699	tnpo3	100	94.041	Gasterosteus_aculeatus
ENSCVAG00000020285	tnpo3	93	85.181	ENSGAGG00000006777	TNPO3	100	85.181	Gopherus_agassizii
ENSCVAG00000020285	tnpo3	100	85.699	ENSGGOG00000008339	TNPO3	100	85.764	Gorilla_gorilla
ENSCVAG00000020285	tnpo3	100	94.475	ENSHBUG00000008351	tnpo3	100	94.475	Haplochromis_burtoni
ENSCVAG00000020285	tnpo3	100	85.590	ENSHGLG00000004463	TNPO3	100	85.590	Heterocephalus_glaber_female
ENSCVAG00000020285	tnpo3	100	85.590	ENSHGLG00100005509	TNPO3	100	85.590	Heterocephalus_glaber_male
ENSCVAG00000020285	tnpo3	100	91.333	ENSHCOG00000007221	tnpo3	100	91.333	Hippocampus_comes
ENSCVAG00000020285	tnpo3	100	89.491	ENSIPUG00000014979	TNPO3	99	89.491	Ictalurus_punctatus
ENSCVAG00000020285	tnpo3	100	85.590	ENSSTOG00000004885	TNPO3	100	85.648	Ictidomys_tridecemlineatus
ENSCVAG00000020285	tnpo3	100	79.570	ENSJJAG00000013530	Tnpo3	100	79.570	Jaculus_jaculus
ENSCVAG00000020285	tnpo3	100	95.558	ENSKMAG00000010497	tnpo3	100	95.558	Kryptolebias_marmoratus
ENSCVAG00000020285	tnpo3	96	92.525	ENSLBEG00000016595	tnpo3	100	92.525	Labrus_bergylta
ENSCVAG00000020285	tnpo3	96	90.374	ENSLBEG00000011988	-	99	90.374	Labrus_bergylta
ENSCVAG00000020285	tnpo3	83	86.519	ENSLACG00000002351	TNPO3	99	86.519	Latimeria_chalumnae
ENSCVAG00000020285	tnpo3	100	90.574	ENSLOCG00000015556	tnpo3	100	90.574	Lepisosteus_oculatus
ENSCVAG00000020285	tnpo3	100	85.005	ENSLAFG00000002738	TNPO3	100	85.005	Loxodonta_africana
ENSCVAG00000020285	tnpo3	100	85.699	ENSMFAG00000032385	TNPO3	100	85.764	Macaca_fascicularis
ENSCVAG00000020285	tnpo3	100	85.699	ENSMMUG00000004311	TNPO3	100	85.764	Macaca_mulatta
ENSCVAG00000020285	tnpo3	100	85.699	ENSMNEG00000045277	TNPO3	100	85.764	Macaca_nemestrina
ENSCVAG00000020285	tnpo3	100	85.699	ENSMLEG00000037881	TNPO3	100	85.764	Mandrillus_leucophaeus
ENSCVAG00000020285	tnpo3	100	95.016	ENSMAMG00000021096	tnpo3	100	95.016	Mastacembelus_armatus
ENSCVAG00000020285	tnpo3	100	94.475	ENSMZEG00005015084	tnpo3	100	94.475	Maylandia_zebra
ENSCVAG00000020285	tnpo3	78	81.655	ENSMGAG00000002839	TNPO3	99	81.655	Meleagris_gallopavo
ENSCVAG00000020285	tnpo3	100	85.482	ENSMAUG00000013463	Tnpo3	100	85.482	Mesocricetus_auratus
ENSCVAG00000020285	tnpo3	85	33.077	ENSMICG00000011003	IPO13	93	33.136	Microcebus_murinus
ENSCVAG00000020285	tnpo3	100	85.699	ENSMICG00000000140	TNPO3	100	85.699	Microcebus_murinus
ENSCVAG00000020285	tnpo3	100	85.590	ENSMOCG00000013264	Tnpo3	100	85.590	Microtus_ochrogaster
ENSCVAG00000020285	tnpo3	100	93.933	ENSMMOG00000005887	tnpo3	100	93.933	Mola_mola
ENSCVAG00000020285	tnpo3	100	86.132	ENSMODG00000014700	TNPO3	100	86.132	Monodelphis_domestica
ENSCVAG00000020285	tnpo3	100	93.933	ENSMALG00000006675	tnpo3	100	93.933	Monopterus_albus
ENSCVAG00000020285	tnpo3	100	85.482	MGP_CAROLIEiJ_G0028176	Tnpo3	100	85.482	Mus_caroli
ENSCVAG00000020285	tnpo3	100	85.482	ENSMUSG00000012535	Tnpo3	100	85.482	Mus_musculus
ENSCVAG00000020285	tnpo3	100	85.482	MGP_PahariEiJ_G0021934	Tnpo3	100	85.482	Mus_pahari
ENSCVAG00000020285	tnpo3	100	85.374	MGP_SPRETEiJ_G0029176	Tnpo3	100	85.374	Mus_spretus
ENSCVAG00000020285	tnpo3	100	85.699	ENSMPUG00000006021	TNPO3	100	85.699	Mustela_putorius_furo
ENSCVAG00000020285	tnpo3	100	77.031	ENSMLUG00000000947	TNPO3	100	77.031	Myotis_lucifugus
ENSCVAG00000020285	tnpo3	100	85.590	ENSNGAG00000008722	Tnpo3	100	85.590	Nannospalax_galili
ENSCVAG00000020285	tnpo3	100	92.849	ENSNBRG00000019001	tnpo3	100	94.363	Neolamprologus_brichardi
ENSCVAG00000020285	tnpo3	100	82.550	ENSNLEG00000012491	TNPO3	100	85.288	Nomascus_leucogenys
ENSCVAG00000020285	tnpo3	92	72.298	ENSMEUG00000002445	TNPO3	91	72.298	Notamacropus_eugenii
ENSCVAG00000020285	tnpo3	85	88.462	ENSOPRG00000006163	TNPO3	90	84.783	Ochotona_princeps
ENSCVAG00000020285	tnpo3	98	85.477	ENSODEG00000012826	TNPO3	100	85.477	Octodon_degus
ENSCVAG00000020285	tnpo3	100	94.800	ENSONIG00000007604	tnpo3	100	94.800	Oreochromis_niloticus
ENSCVAG00000020285	tnpo3	95	82.916	ENSOANG00000011451	TNPO3	99	82.916	Ornithorhynchus_anatinus
ENSCVAG00000020285	tnpo3	99	82.668	ENSOCUG00000010105	TNPO3	99	82.668	Oryctolagus_cuniculus
ENSCVAG00000020285	tnpo3	100	93.174	ENSORLG00000029369	tnpo3	100	93.174	Oryzias_latipes
ENSCVAG00000020285	tnpo3	100	93.174	ENSORLG00020003464	tnpo3	100	93.174	Oryzias_latipes_hni
ENSCVAG00000020285	tnpo3	100	93.283	ENSORLG00015002610	tnpo3	100	93.283	Oryzias_latipes_hsok
ENSCVAG00000020285	tnpo3	100	93.608	ENSOMEG00000021006	tnpo3	100	93.608	Oryzias_melastigma
ENSCVAG00000020285	tnpo3	100	85.590	ENSOGAG00000015340	TNPO3	100	85.590	Otolemur_garnettii
ENSCVAG00000020285	tnpo3	100	85.699	ENSOARG00000004026	TNPO3	100	85.699	Ovis_aries
ENSCVAG00000020285	tnpo3	100	85.699	ENSPPAG00000034975	TNPO3	100	85.764	Pan_paniscus
ENSCVAG00000020285	tnpo3	100	85.699	ENSPPRG00000002050	TNPO3	100	85.699	Panthera_pardus
ENSCVAG00000020285	tnpo3	100	85.699	ENSPTIG00000016167	TNPO3	100	85.699	Panthera_tigris_altaica
ENSCVAG00000020285	tnpo3	100	85.699	ENSPTRG00000019676	TNPO3	100	85.764	Pan_troglodytes
ENSCVAG00000020285	tnpo3	98	85.635	ENSPANG00000022226	TNPO3	100	85.288	Papio_anubis
ENSCVAG00000020285	tnpo3	100	85.313	ENSPKIG00000008628	-	100	85.313	Paramormyrops_kingsleyae
ENSCVAG00000020285	tnpo3	100	88.407	ENSPKIG00000023234	tnpo3	100	88.407	Paramormyrops_kingsleyae
ENSCVAG00000020285	tnpo3	62	87.676	ENSPMGG00000009763	tnpo3	99	87.676	Periophthalmus_magnuspinnatus
ENSCVAG00000020285	tnpo3	100	85.482	ENSPEMG00000000422	Tnpo3	100	85.482	Peromyscus_maniculatus_bairdii
ENSCVAG00000020285	tnpo3	95	72.254	ENSPMAG00000008621	tnpo3	100	72.254	Petromyzon_marinus
ENSCVAG00000020285	tnpo3	100	85.807	ENSPCIG00000011366	TNPO3	100	85.807	Phascolarctos_cinereus
ENSCVAG00000020285	tnpo3	100	96.533	ENSPFOG00000013592	tnpo3	99	96.533	Poecilia_formosa
ENSCVAG00000020285	tnpo3	100	96.533	ENSPLAG00000010188	tnpo3	100	96.533	Poecilia_latipinna
ENSCVAG00000020285	tnpo3	100	96.641	ENSPMEG00000022731	tnpo3	100	96.641	Poecilia_mexicana
ENSCVAG00000020285	tnpo3	100	85.699	ENSPPYG00000017990	TNPO3	100	85.699	Pongo_abelii
ENSCVAG00000020285	tnpo3	99	76.495	ENSPCAG00000010158	TNPO3	98	76.495	Procavia_capensis
ENSCVAG00000020285	tnpo3	87	85.855	ENSPCOG00000023901	TNPO3	96	85.855	Propithecus_coquereli
ENSCVAG00000020285	tnpo3	99	79.937	ENSPVAG00000015757	TNPO3	98	79.937	Pteropus_vampyrus
ENSCVAG00000020285	tnpo3	100	94.475	ENSPNYG00000002349	tnpo3	100	94.475	Pundamilia_nyererei
ENSCVAG00000020285	tnpo3	100	91.874	ENSPNAG00000001142	tnpo3	100	91.874	Pygocentrus_nattereri
ENSCVAG00000020285	tnpo3	100	85.374	ENSRNOG00000021758	Tnpo3	100	85.414	Rattus_norvegicus
ENSCVAG00000020285	tnpo3	100	85.699	ENSRBIG00000042549	TNPO3	100	85.764	Rhinopithecus_bieti
ENSCVAG00000020285	tnpo3	100	85.699	ENSRROG00000039264	TNPO3	100	85.699	Rhinopithecus_roxellana
ENSCVAG00000020285	tnpo3	93	77.734	ENSSBOG00000029642	TNPO3	100	77.734	Saimiri_boliviensis_boliviensis
ENSCVAG00000020285	tnpo3	95	86.379	ENSSHAG00000006837	TNPO3	99	86.379	Sarcophilus_harrisii
ENSCVAG00000020285	tnpo3	100	88.841	ENSSFOG00015001474	tnpo3	100	88.841	Scleropages_formosus
ENSCVAG00000020285	tnpo3	100	84.188	ENSSFOG00015004256	tnpo3	100	84.188	Scleropages_formosus
ENSCVAG00000020285	tnpo3	100	94.691	ENSSMAG00000010422	tnpo3	97	94.691	Scophthalmus_maximus
ENSCVAG00000020285	tnpo3	100	95.125	ENSSDUG00000004850	tnpo3	100	95.125	Seriola_dumerili
ENSCVAG00000020285	tnpo3	100	95.125	ENSSLDG00000016927	tnpo3	100	95.125	Seriola_lalandi_dorsalis
ENSCVAG00000020285	tnpo3	95	74.421	ENSSARG00000013893	TNPO3	98	74.421	Sorex_araneus
ENSCVAG00000020285	tnpo3	99	81.453	ENSSPUG00000007457	TNPO3	99	81.494	Sphenodon_punctatus
ENSCVAG00000020285	tnpo3	79	96.694	ENSSPAG00000014209	tnpo3	99	96.694	Stegastes_partitus
ENSCVAG00000020285	tnpo3	100	85.699	ENSSSCG00000016572	TNPO3	100	85.764	Sus_scrofa
ENSCVAG00000020285	tnpo3	100	91.685	ENSTNIG00000003347	tnpo3	100	91.685	Tetraodon_nigroviridis
ENSCVAG00000020285	tnpo3	88	84.466	ENSTBEG00000007220	TNPO3	90	84.466	Tupaia_belangeri
ENSCVAG00000020285	tnpo3	99	73.109	ENSTTRG00000014618	TNPO3	98	73.109	Tursiops_truncatus
ENSCVAG00000020285	tnpo3	100	85.699	ENSUAMG00000021281	TNPO3	100	85.699	Ursus_americanus
ENSCVAG00000020285	tnpo3	100	85.699	ENSUMAG00000006882	TNPO3	100	85.699	Ursus_maritimus
ENSCVAG00000020285	tnpo3	85	72.615	ENSVPAG00000006166	TNPO3	88	72.615	Vicugna_pacos
ENSCVAG00000020285	tnpo3	100	85.699	ENSVVUG00000011004	TNPO3	100	85.908	Vulpes_vulpes
ENSCVAG00000020285	tnpo3	99	76.706	ENSXETG00000015009	tnpo3	99	76.706	Xenopus_tropicalis
ENSCVAG00000020285	tnpo3	100	96.425	ENSXMAG00000013062	tnpo3	100	96.425	Xiphophorus_maculatus