EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000020347 (Gene tree)
Gene ID: 107104034
Gene Symbol: tdrkh
Alias: TDRD2|zgc:113056
Full Name: tudor and KH domain-containing protein-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 15612 bases
Position: chrKL654097.1:43619-59230
Accession: 107104034
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000031190	TUDOR	PF00567.24	9.6e-17	1	1
ENSCVAP00000017203	TUDOR	PF00567.24	9.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000025784	-	1317	-	ENSCVAP00000017203	438 (aa)	-	-
ENSCVAT00000025838	-	1305	XM_015403937	ENSCVAP00000031190	434 (aa)	XP_015259423	-

Gene Model

Click here to download ENSCVAG00000020347's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000020347's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000020347	tdrkh	78	81.373	ENSAPOG00000012653	tdrkh	61	81.373	Acanthochromis_polyacanthus
ENSCVAG00000020347	tdrkh	73	80.874	ENSACIG00000010318	tdrkh	60	80.645	Amphilophus_citrinellus
ENSCVAG00000020347	tdrkh	78	81.863	ENSAOCG00000020623	tdrkh	61	81.863	Amphiprion_ocellaris
ENSCVAG00000020347	tdrkh	78	81.863	ENSAPEG00000018388	tdrkh	61	81.863	Amphiprion_percula
ENSCVAG00000020347	tdrkh	78	83.824	ENSATEG00000023809	tdrkh	62	83.824	Anabas_testudineus
ENSCVAG00000020347	tdrkh	78	80.392	ENSACLG00000003017	tdrkh	62	80.392	Astatotilapia_calliptera
ENSCVAG00000020347	tdrkh	77	71.707	ENSAMXG00000011664	tdrkh	58	71.707	Astyanax_mexicanus
ENSCVAG00000020347	tdrkh	77	71.220	ENSCSEG00000002894	tdrkh	60	71.220	Cynoglossus_semilaevis
ENSCVAG00000020347	tdrkh	77	70.732	ENSDARG00000053474	tdrkh	58	70.732	Danio_rerio
ENSCVAG00000020347	tdrkh	78	72.816	ENSELUG00000024537	tdrkh	61	72.816	Esox_lucius
ENSCVAG00000020347	tdrkh	78	86.765	ENSFHEG00000003544	tdrkh	62	86.765	Fundulus_heteroclitus
ENSCVAG00000020347	tdrkh	76	73.134	ENSGMOG00000009304	tdrkh	58	73.134	Gadus_morhua
ENSCVAG00000020347	tdrkh	78	86.765	ENSGAFG00000010754	tdrkh	62	86.765	Gambusia_affinis
ENSCVAG00000020347	tdrkh	78	77.114	ENSGACG00000015258	tdrkh	58	77.114	Gasterosteus_aculeatus
ENSCVAG00000020347	tdrkh	78	80.882	ENSHBUG00000017609	tdrkh	62	80.882	Haplochromis_burtoni
ENSCVAG00000020347	tdrkh	77	70.388	ENSIPUG00000009673	tdrkh	61	70.388	Ictalurus_punctatus
ENSCVAG00000020347	tdrkh	78	80.392	ENSKMAG00000016638	tdrkh	58	80.392	Kryptolebias_marmoratus
ENSCVAG00000020347	tdrkh	77	81.373	ENSLBEG00000027323	tdrkh	59	81.373	Labrus_bergylta
ENSCVAG00000020347	tdrkh	75	64.762	ENSLOCG00000011381	tdrkh	60	64.762	Lepisosteus_oculatus
ENSCVAG00000020347	tdrkh	79	78.641	ENSMAMG00000020343	tdrkh	62	78.641	Mastacembelus_armatus
ENSCVAG00000020347	tdrkh	78	80.392	ENSMZEG00005006755	tdrkh	62	80.392	Maylandia_zebra
ENSCVAG00000020347	tdrkh	73	81.915	ENSMMOG00000020663	tdrkh	57	81.915	Mola_mola
ENSCVAG00000020347	tdrkh	79	75.243	ENSMALG00000015401	tdrkh	61	75.243	Monopterus_albus
ENSCVAG00000020347	tdrkh	77	73.632	ENSNBRG00000023815	tdrkh	56	78.788	Neolamprologus_brichardi
ENSCVAG00000020347	tdrkh	78	76.471	ENSORLG00000029204	tdrkh	62	76.471	Oryzias_latipes
ENSCVAG00000020347	tdrkh	73	72.376	ENSORLG00020016168	tdrkh	61	72.376	Oryzias_latipes_hni
ENSCVAG00000020347	tdrkh	74	77.660	ENSORLG00015014094	tdrkh	61	77.660	Oryzias_latipes_hsok
ENSCVAG00000020347	tdrkh	78	78.922	ENSOMEG00000015063	tdrkh	58	78.922	Oryzias_melastigma
ENSCVAG00000020347	tdrkh	78	69.048	ENSPKIG00000017597	tdrkh	62	69.048	Paramormyrops_kingsleyae
ENSCVAG00000020347	tdrkh	70	72.832	ENSPMGG00000019362	tdrkh	57	72.832	Periophthalmus_magnuspinnatus
ENSCVAG00000020347	tdrkh	76	86.765	ENSPFOG00000013032	tdrkh	57	86.765	Poecilia_formosa
ENSCVAG00000020347	tdrkh	76	86.765	ENSPLAG00000004193	tdrkh	61	86.765	Poecilia_latipinna
ENSCVAG00000020347	tdrkh	76	86.765	ENSPMEG00000016502	tdrkh	61	86.765	Poecilia_mexicana
ENSCVAG00000020347	tdrkh	76	83.495	ENSPREG00000004213	tdrkh	57	83.495	Poecilia_reticulata
ENSCVAG00000020347	tdrkh	74	80.645	ENSPNYG00000022818	tdrkh	59	80.423	Pundamilia_nyererei
ENSCVAG00000020347	tdrkh	77	71.707	ENSPNAG00000008783	tdrkh	58	71.707	Pygocentrus_nattereri
ENSCVAG00000020347	tdrkh	77	68.599	ENSSFOG00015001048	tdrkh	61	69.082	Scleropages_formosus
ENSCVAG00000020347	tdrkh	78	77.941	ENSSMAG00000001532	tdrkh	88	62.319	Scophthalmus_maximus
ENSCVAG00000020347	tdrkh	77	81.373	ENSSDUG00000013393	tdrkh	60	81.373	Seriola_dumerili
ENSCVAG00000020347	tdrkh	77	81.863	ENSSLDG00000017418	tdrkh	60	81.863	Seriola_lalandi_dorsalis
ENSCVAG00000020347	tdrkh	78	82.843	ENSSPAG00000006435	tdrkh	58	82.843	Stegastes_partitus
ENSCVAG00000020347	tdrkh	71	74.302	ENSTRUG00000006644	tdrkh	58	74.302	Takifugu_rubripes
ENSCVAG00000020347	tdrkh	76	74.384	ENSTNIG00000003157	tdrkh	61	74.384	Tetraodon_nigroviridis
ENSCVAG00000020347	tdrkh	97	44.575	ENSXCOG00000016972	tdrkh	96	41.497	Xiphophorus_couchianus
ENSCVAG00000020347	tdrkh	76	80.392	ENSXMAG00000014756	tdrkh	56	85.380	Xiphophorus_maculatus