EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000020513 (Gene tree)
Gene ID: -
Gene Symbol: sall1a
Alias: cb896|id:ibd5077|sall1|sb:eu809|spa1a|spalt1a
Full Name: spalt like transcription factor 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 8964 bases
Position: chrKL652720.1:664765-673728
Accession: 107088498
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000031330	zf-C2H2	PF00096.26	5.5e-32	1	6
ENSCVAP00000031330	zf-C2H2	PF00096.26	5.5e-32	2	6
ENSCVAP00000031330	zf-C2H2	PF00096.26	5.5e-32	3	6
ENSCVAP00000031330	zf-C2H2	PF00096.26	5.5e-32	4	6
ENSCVAP00000031330	zf-C2H2	PF00096.26	5.5e-32	5	6
ENSCVAP00000031330	zf-C2H2	PF00096.26	5.5e-32	6	6
ENSCVAP00000031330	zf-met	PF12874.7	1.4e-22	1	5
ENSCVAP00000031330	zf-met	PF12874.7	1.4e-22	2	5
ENSCVAP00000031330	zf-met	PF12874.7	1.4e-22	3	5
ENSCVAP00000031330	zf-met	PF12874.7	1.4e-22	4	5
ENSCVAP00000031330	zf-met	PF12874.7	1.4e-22	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000032305	-	4413	XM_015380709	ENSCVAP00000031330	1184 (aa)	XP_015236195	-

Gene Model

Click here to download ENSCVAG00000020513's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000020513's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000020513	sall1a	72	78.788	ENSCVAG00000009684	sall3a	79	78.788
ENSCVAG00000020513	sall1a	76	77.273	ENSCVAG00000010815	sall4	85	77.273
ENSCVAG00000020513	sall1a	50	51.111	ENSCVAG00000010442	-	93	51.111
ENSCVAG00000020513	sall1a	50	38.372	ENSCVAG00000006460	-	79	38.372
ENSCVAG00000020513	sall1a	50	39.080	ENSCVAG00000012543	-	93	39.080
ENSCVAG00000020513	sall1a	50	53.488	ENSCVAG00000021107	-	94	53.488
ENSCVAG00000020513	sall1a	62	43.103	ENSCVAG00000022991	-	96	47.826
ENSCVAG00000020513	sall1a	61	55.263	ENSCVAG00000013337	-	87	55.263
ENSCVAG00000020513	sall1a	59	50.909	ENSCVAG00000012302	-	98	50.909
ENSCVAG00000020513	sall1a	77	81.967	ENSCVAG00000017005	sall3b	80	84.746
ENSCVAG00000020513	sall1a	61	48.214	ENSCVAG00000016092	-	50	48.214

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000020513	sall1a	99	66.276	ENSG00000103449	SALL1	95	66.606	Homo_sapiens
ENSCVAG00000020513	sall1a	99	91.831	ENSAPOG00000022764	sall1a	90	91.831	Acanthochromis_polyacanthus
ENSCVAG00000020513	sall1a	99	65.352	ENSAMEG00000006817	SALL1	90	65.995	Ailuropoda_melanoleuca
ENSCVAG00000020513	sall1a	99	90.112	ENSACIG00000004231	sall1a	90	90.112	Amphilophus_citrinellus
ENSCVAG00000020513	sall1a	99	92.175	ENSAOCG00000002800	sall1a	90	92.175	Amphiprion_ocellaris
ENSCVAG00000020513	sall1a	99	92.003	ENSAPEG00000010179	sall1a	90	92.003	Amphiprion_percula
ENSCVAG00000020513	sall1a	99	89.596	ENSATEG00000003006	sall1a	90	89.596	Anabas_testudineus
ENSCVAG00000020513	sall1a	99	67.369	ENSAPLG00000003356	SALL1	90	67.791	Anas_platyrhynchos
ENSCVAG00000020513	sall1a	98	65.646	ENSACAG00000014399	SALL1	87	65.532	Anolis_carolinensis
ENSCVAG00000020513	sall1a	99	66.303	ENSANAG00000027238	SALL1	90	66.972	Aotus_nancymaae
ENSCVAG00000020513	sall1a	99	90.112	ENSACLG00000017148	sall1a	90	90.112	Astatotilapia_calliptera
ENSCVAG00000020513	sall1a	99	63.830	ENSAMXG00000017702	sall1b	90	63.830	Astyanax_mexicanus
ENSCVAG00000020513	sall1a	99	78.186	ENSAMXG00000018599	sall1a	90	78.614	Astyanax_mexicanus
ENSCVAG00000020513	sall1a	99	65.941	ENSBTAG00000008544	SALL1	90	66.443	Bos_taurus
ENSCVAG00000020513	sall1a	99	66.667	ENSCJAG00000001740	SALL1	90	67.142	Callithrix_jacchus
ENSCVAG00000020513	sall1a	99	65.520	ENSCAFG00000009755	SALL1	90	66.499	Canis_familiaris
ENSCVAG00000020513	sall1a	99	65.520	ENSCAFG00020002842	SALL1	90	66.499	Canis_lupus_dingo
ENSCVAG00000020513	sall1a	99	65.693	ENSCHIG00000026074	SALL1	90	66.082	Capra_hircus
ENSCVAG00000020513	sall1a	99	67.391	ENSTSYG00000029464	SALL1	90	67.448	Carlito_syrichta
ENSCVAG00000020513	sall1a	97	66.981	ENSCPOG00000006564	SALL1	90	66.953	Cavia_porcellus
ENSCVAG00000020513	sall1a	99	66.639	ENSCCAG00000001639	SALL1	91	67.030	Cebus_capucinus
ENSCVAG00000020513	sall1a	99	66.555	ENSCATG00000004982	SALL1	90	67.056	Cercocebus_atys
ENSCVAG00000020513	sall1a	99	66.527	ENSCLAG00000006380	SALL1	90	66.862	Chinchilla_lanigera
ENSCVAG00000020513	sall1a	99	65.633	ENSCSAG00000005319	SALL1	90	66.138	Chlorocebus_sabaeus
ENSCVAG00000020513	sall1a	70	66.406	ENSCHOG00000000800	-	69	66.667	Choloepus_hoffmanni
ENSCVAG00000020513	sall1a	99	67.454	ENSCPBG00000015924	SALL1	95	68.044	Chrysemys_picta_bellii
ENSCVAG00000020513	sall1a	99	66.723	ENSCANG00000036664	SALL1	90	67.198	Colobus_angolensis_palliatus
ENSCVAG00000020513	sall1a	99	65.774	ENSCGRG00001023314	-	90	66.164	Cricetulus_griseus_chok1gshd
ENSCVAG00000020513	sall1a	97	65.612	ENSCGRG00000009496	Sall1	90	66.010	Cricetulus_griseus_crigri
ENSCVAG00000020513	sall1a	99	87.489	ENSCSEG00000009349	sall1a	90	87.489	Cynoglossus_semilaevis
ENSCVAG00000020513	sall1a	99	77.218	ENSDARG00000074319	sall1a	90	76.792	Danio_rerio
ENSCVAG00000020513	sall1a	99	63.462	ENSDARG00000075891	sall1b	91	63.462	Danio_rerio
ENSCVAG00000020513	sall1a	99	66.751	ENSDNOG00000016413	SALL1	90	66.891	Dasypus_novemcinctus
ENSCVAG00000020513	sall1a	97	65.950	ENSETEG00000015150	SALL1	90	66.265	Echinops_telfairi
ENSCVAG00000020513	sall1a	66	61.538	ENSEBUG00000011732	SALL1	96	60.714	Eptatretus_burgeri
ENSCVAG00000020513	sall1a	62	61.538	ENSEBUG00000008798	SALL1	89	61.538	Eptatretus_burgeri
ENSCVAG00000020513	sall1a	99	66.695	ENSEASG00005014602	SALL1	90	66.751	Equus_asinus_asinus
ENSCVAG00000020513	sall1a	99	66.835	ENSECAG00000011334	SALL1	99	66.807	Equus_caballus
ENSCVAG00000020513	sall1a	97	66.438	ENSEEUG00000002014	SALL1	90	66.438	Erinaceus_europaeus
ENSCVAG00000020513	sall1a	99	59.615	ENSELUG00000017774	-	90	59.615	Esox_lucius
ENSCVAG00000020513	sall1a	99	75.741	ENSELUG00000006159	sall1a	91	75.981	Esox_lucius
ENSCVAG00000020513	sall1a	99	64.484	ENSFCAG00000024654	SALL1	90	65.546	Felis_catus
ENSCVAG00000020513	sall1a	99	67.791	ENSFALG00000000074	SALL1	90	68.017	Ficedula_albicollis
ENSCVAG00000020513	sall1a	72	80.303	ENSFHEG00000008424	-	90	80.303	Fundulus_heteroclitus
ENSCVAG00000020513	sall1a	99	95.271	ENSFHEG00000012579	sall1a	90	95.271	Fundulus_heteroclitus
ENSCVAG00000020513	sall1a	96	58.929	ENSGMOG00000013383	-	90	58.929	Gadus_morhua
ENSCVAG00000020513	sall1a	99	82.277	ENSGMOG00000006103	sall1a	90	82.277	Gadus_morhua
ENSCVAG00000020513	sall1a	99	67.707	ENSGALG00000039238	SALL1	90	67.960	Gallus_gallus
ENSCVAG00000020513	sall1a	99	94.497	ENSGAFG00000009964	sall1a	90	94.497	Gambusia_affinis
ENSCVAG00000020513	sall1a	99	87.446	ENSGACG00000016702	sall1a	90	87.446	Gasterosteus_aculeatus
ENSCVAG00000020513	sall1a	99	67.481	ENSGAGG00000013979	SALL1	90	68.044	Gopherus_agassizii
ENSCVAG00000020513	sall1a	99	66.360	ENSGGOG00000000663	SALL1	90	66.889	Gorilla_gorilla
ENSCVAG00000020513	sall1a	99	90.026	ENSHBUG00000022005	sall1a	90	90.026	Haplochromis_burtoni
ENSCVAG00000020513	sall1a	99	66.778	ENSHGLG00000004288	-	90	67.169	Heterocephalus_glaber_female
ENSCVAG00000020513	sall1a	99	66.778	ENSHGLG00100017496	SALL1	90	67.169	Heterocephalus_glaber_male
ENSCVAG00000020513	sall1a	99	83.772	ENSHCOG00000000974	sall1a	90	83.772	Hippocampus_comes
ENSCVAG00000020513	sall1a	99	77.483	ENSIPUG00000016265	SALL1	90	77.397	Ictalurus_punctatus
ENSCVAG00000020513	sall1a	99	63.830	ENSIPUG00000022928	sall1b	90	63.830	Ictalurus_punctatus
ENSCVAG00000020513	sall1a	99	66.890	ENSSTOG00000020885	SALL1	90	67.333	Ictidomys_tridecemlineatus
ENSCVAG00000020513	sall1a	99	91.230	ENSKMAG00000016681	sall1a	90	91.230	Kryptolebias_marmoratus
ENSCVAG00000020513	sall1a	96	86.772	ENSLBEG00000012207	sall1a	86	86.772	Labrus_bergylta
ENSCVAG00000020513	sall1a	99	67.483	ENSLACG00000003556	SALL1	90	67.821	Latimeria_chalumnae
ENSCVAG00000020513	sall1a	96	61.538	ENSLACG00000014018	-	88	61.538	Latimeria_chalumnae
ENSCVAG00000020513	sall1a	99	83.871	ENSLOCG00000007283	sall1b	85	83.871	Lepisosteus_oculatus
ENSCVAG00000020513	sall1a	97	66.924	ENSLAFG00000015251	SALL1	90	67.324	Loxodonta_africana
ENSCVAG00000020513	sall1a	99	66.583	ENSMFAG00000003298	SALL1	90	67.056	Macaca_fascicularis
ENSCVAG00000020513	sall1a	91	66.272	ENSMMUG00000017200	SALL1	89	66.788	Macaca_mulatta
ENSCVAG00000020513	sall1a	91	66.576	ENSMNEG00000034770	SALL1	89	66.727	Macaca_nemestrina
ENSCVAG00000020513	sall1a	99	66.723	ENSMLEG00000036406	SALL1	90	67.198	Mandrillus_leucophaeus
ENSCVAG00000020513	sall1a	99	90.550	ENSMAMG00000004164	sall1a	90	90.550	Mastacembelus_armatus
ENSCVAG00000020513	sall1a	99	90.112	ENSMZEG00005006479	sall1a	90	90.112	Maylandia_zebra
ENSCVAG00000020513	sall1a	97	67.442	ENSMGAG00000004704	SALL1	90	67.700	Meleagris_gallopavo
ENSCVAG00000020513	sall1a	99	65.378	ENSMAUG00000019093	Sall1	93	65.911	Mesocricetus_auratus
ENSCVAG00000020513	sall1a	99	66.359	ENSMICG00000036486	SALL1	90	66.499	Microcebus_murinus
ENSCVAG00000020513	sall1a	99	88.736	ENSMMOG00000016400	sall1a	90	88.736	Mola_mola
ENSCVAG00000020513	sall1a	99	66.976	ENSMODG00000013114	SALL1	90	67.622	Monodelphis_domestica
ENSCVAG00000020513	sall1a	99	89.854	ENSMALG00000013400	sall1a	90	89.854	Monopterus_albus
ENSCVAG00000020513	sall1a	99	65.609	MGP_CAROLIEiJ_G0031362	Sall1	90	66.138	Mus_caroli
ENSCVAG00000020513	sall1a	99	65.221	ENSMUSG00000031665	Sall1	90	65.943	Mus_musculus
ENSCVAG00000020513	sall1a	99	65.304	MGP_PahariEiJ_G0022961	Sall1	90	65.833	Mus_pahari
ENSCVAG00000020513	sall1a	99	65.138	MGP_SPRETEiJ_G0032480	Sall1	90	65.860	Mus_spretus
ENSCVAG00000020513	sall1a	97	64.991	ENSMPUG00000003265	SALL1	86	65.081	Mustela_putorius_furo
ENSCVAG00000020513	sall1a	96	64.021	ENSMLUG00000015541	SALL1	89	64.888	Myotis_lucifugus
ENSCVAG00000020513	sall1a	99	90.284	ENSNBRG00000009307	sall1a	90	90.284	Neolamprologus_brichardi
ENSCVAG00000020513	sall1a	92	94.444	ENSNLEG00000001008	SALL1	88	94.444	Nomascus_leucogenys
ENSCVAG00000020513	sall1a	99	67.313	ENSMEUG00000012206	SALL1	90	67.454	Notamacropus_eugenii
ENSCVAG00000020513	sall1a	83	71.402	ENSOPRG00000005645	SALL1	61	71.402	Ochotona_princeps
ENSCVAG00000020513	sall1a	99	66.946	ENSODEG00000003685	SALL1	90	67.003	Octodon_degus
ENSCVAG00000020513	sall1a	99	90.800	ENSONIG00000002831	sall1a	99	90.800	Oreochromis_niloticus
ENSCVAG00000020513	sall1a	92	69.307	ENSOANG00000013399	SALL1	85	69.307	Ornithorhynchus_anatinus
ENSCVAG00000020513	sall1a	99	89.252	ENSORLG00000013827	sall1a	90	89.252	Oryzias_latipes
ENSCVAG00000020513	sall1a	99	89.252	ENSORLG00020020570	sall1a	90	89.252	Oryzias_latipes_hni
ENSCVAG00000020513	sall1a	99	89.338	ENSORLG00015018830	sall1a	90	89.338	Oryzias_latipes_hsok
ENSCVAG00000020513	sall1a	99	89.080	ENSOMEG00000016043	sall1a	90	89.080	Oryzias_melastigma
ENSCVAG00000020513	sall1a	99	67.030	ENSOGAG00000027316	SALL1	90	67.114	Otolemur_garnettii
ENSCVAG00000020513	sall1a	99	63.830	ENSOARG00000017583	SALL1	85	63.882	Ovis_aries
ENSCVAG00000020513	sall1a	97	66.524	ENSPPAG00000035657	SALL1	90	66.866	Pan_paniscus
ENSCVAG00000020513	sall1a	99	49.108	ENSPPAG00000035136	-	89	49.490	Pan_paniscus
ENSCVAG00000020513	sall1a	99	64.400	ENSPPRG00000023283	SALL1	90	65.462	Panthera_pardus
ENSCVAG00000020513	sall1a	88	71.053	ENSPTIG00000013539	-	94	71.078	Panthera_tigris_altaica
ENSCVAG00000020513	sall1a	99	66.387	ENSPTRG00000008108	SALL1	90	67.056	Pan_troglodytes
ENSCVAG00000020513	sall1a	99	49.703	ENSPTRG00000045256	-	90	50.085	Pan_troglodytes
ENSCVAG00000020513	sall1a	99	66.723	ENSPANG00000024176	SALL1	90	67.198	Papio_anubis
ENSCVAG00000020513	sall1a	99	68.452	ENSPKIG00000005383	-	89	68.878	Paramormyrops_kingsleyae
ENSCVAG00000020513	sall1a	99	70.364	ENSPKIG00000022251	sall1a	90	70.533	Paramormyrops_kingsleyae
ENSCVAG00000020513	sall1a	99	68.128	ENSPSIG00000008582	SALL1	90	68.439	Pelodiscus_sinensis
ENSCVAG00000020513	sall1a	99	82.218	ENSPMGG00000021788	sall1a	90	82.218	Periophthalmus_magnuspinnatus
ENSCVAG00000020513	sall1a	63	63.462	ENSPMAG00000008148	sall1b	89	58.929	Petromyzon_marinus
ENSCVAG00000020513	sall1a	99	67.228	ENSPCIG00000017840	SALL1	90	67.538	Phascolarctos_cinereus
ENSCVAG00000020513	sall1a	97	94.654	ENSPFOG00000015799	sall1a	86	94.654	Poecilia_formosa
ENSCVAG00000020513	sall1a	99	94.927	ENSPLAG00000022539	sall1a	90	94.927	Poecilia_latipinna
ENSCVAG00000020513	sall1a	99	95.185	ENSPMEG00000020894	sall1a	90	95.185	Poecilia_mexicana
ENSCVAG00000020513	sall1a	99	94.755	ENSPREG00000006802	sall1a	90	94.755	Poecilia_reticulata
ENSCVAG00000020513	sall1a	99	66.359	ENSPPYG00000007345	SALL1	95	67.028	Pongo_abelii
ENSCVAG00000020513	sall1a	92	70.370	ENSPCAG00000008162	SALL1	93	70.370	Procavia_capensis
ENSCVAG00000020513	sall1a	99	66.359	ENSPCOG00000028192	SALL1	90	66.946	Propithecus_coquereli
ENSCVAG00000020513	sall1a	62	67.778	ENSPVAG00000015374	SALL1	85	68.289	Pteropus_vampyrus
ENSCVAG00000020513	sall1a	99	90.198	ENSPNYG00000010865	sall1a	90	90.198	Pundamilia_nyererei
ENSCVAG00000020513	sall1a	99	63.830	ENSPNAG00000007442	sall1b	90	63.830	Pygocentrus_nattereri
ENSCVAG00000020513	sall1a	99	76.581	ENSPNAG00000023644	sall1a	90	77.009	Pygocentrus_nattereri
ENSCVAG00000020513	sall1a	99	65.825	ENSRNOG00000013907	Sall1	90	65.993	Rattus_norvegicus
ENSCVAG00000020513	sall1a	91	66.148	ENSRBIG00000015707	SALL1	89	66.697	Rhinopithecus_bieti
ENSCVAG00000020513	sall1a	96	66.580	ENSRROG00000035777	SALL1	89	67.268	Rhinopithecus_roxellana
ENSCVAG00000020513	sall1a	99	66.667	ENSSBOG00000032186	SALL1	90	67.223	Saimiri_boliviensis_boliviensis
ENSCVAG00000020513	sall1a	99	66.723	ENSSHAG00000009477	SALL1	90	66.947	Sarcophilus_harrisii
ENSCVAG00000020513	sall1a	97	69.681	ENSSFOG00015001590	sall1a	89	70.252	Scleropages_formosus
ENSCVAG00000020513	sall1a	99	70.897	ENSSFOG00015020020	sall1a	90	70.970	Scleropages_formosus
ENSCVAG00000020513	sall1a	99	90.026	ENSSMAG00000009160	sall1a	90	90.026	Scophthalmus_maximus
ENSCVAG00000020513	sall1a	99	91.660	ENSSDUG00000006507	sall1a	90	91.660	Seriola_dumerili
ENSCVAG00000020513	sall1a	99	55.319	ENSSDUG00000000748	sall1b	99	55.319	Seriola_dumerili
ENSCVAG00000020513	sall1a	99	91.660	ENSSLDG00000017721	sall1a	90	91.660	Seriola_lalandi_dorsalis
ENSCVAG00000020513	sall1a	96	65.579	ENSSARG00000000661	SALL1	89	66.065	Sorex_araneus
ENSCVAG00000020513	sall1a	99	67.285	ENSSPUG00000000156	SALL1	90	67.818	Sphenodon_punctatus
ENSCVAG00000020513	sall1a	99	91.838	ENSSPAG00000021615	sall1a	90	91.838	Stegastes_partitus
ENSCVAG00000020513	sall1a	99	65.445	ENSSSCG00000002836	SALL1	97	65.583	Sus_scrofa
ENSCVAG00000020513	sall1a	99	67.538	ENSTGUG00000007514	SALL1	90	67.595	Taeniopygia_guttata
ENSCVAG00000020513	sall1a	99	85.395	ENSTRUG00000008950	sall1a	98	85.309	Takifugu_rubripes
ENSCVAG00000020513	sall1a	99	84.093	ENSTNIG00000004257	sall1a	98	84.093	Tetraodon_nigroviridis
ENSCVAG00000020513	sall1a	99	66.162	ENSUAMG00000023379	-	92	66.527	Ursus_americanus
ENSCVAG00000020513	sall1a	99	65.337	ENSVVUG00000019383	-	99	66.388	Vulpes_vulpes
ENSCVAG00000020513	sall1a	86	55.000	ENSXETG00000017176	sall2	72	55.000	Xenopus_tropicalis
ENSCVAG00000020513	sall1a	99	64.128	ENSXETG00000018417	sall1	90	64.157	Xenopus_tropicalis
ENSCVAG00000020513	sall1a	99	94.755	ENSXMAG00000016273	sall1a	90	94.755	Xiphophorus_maculatus