EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000020558 (Gene tree)
Gene ID: 107094167
Gene Symbol: snx25
Alias: -
Full Name: sorting nexin 25
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 47212 bases
Position: chrKL652967.1:600062-647273
Accession: 107094167
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000017408	Isy1	PF06246.12	0.00019	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000026064	-	2523	-	ENSCVAP00000017408	840 (aa)	-	-
ENSCVAT00000026073	-	4258	XM_015389609	ENSCVAP00000017419	972 (aa)	XP_015245095	UPI00074284E8

Gene Model

Click here to download ENSCVAG00000020558's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000020558's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000020558	snx25	98	91.331	ENSACIG00000022335	snx25	98	90.354	Amphilophus_citrinellus
ENSCVAG00000020558	snx25	99	89.976	ENSACLG00000020812	snx25	98	89.976	Astatotilapia_calliptera
ENSCVAG00000020558	snx25	72	91.817	ENSGAFG00000015334	snx25	80	91.817	Gambusia_affinis
ENSCVAG00000020558	snx25	99	90.453	ENSHBUG00000020302	snx25	98	89.499	Haplochromis_burtoni
ENSCVAG00000020558	snx25	99	71.259	ENSIPUG00000020587	snx25	87	71.259	Ictalurus_punctatus
ENSCVAG00000020558	snx25	98	92.010	ENSLBEG00000014990	snx25	99	92.010	Labrus_bergylta
ENSCVAG00000020558	snx25	99	89.379	ENSMZEG00005005079	snx25	98	89.379	Maylandia_zebra
ENSCVAG00000020558	snx25	98	88.527	ENSMALG00000013142	snx25	99	88.285	Monopterus_albus
ENSCVAG00000020558	snx25	99	92.985	ENSPMEG00000007381	snx25	86	92.985	Poecilia_mexicana
ENSCVAG00000020558	snx25	99	89.976	ENSPNYG00000000032	snx25	98	89.976	Pundamilia_nyererei
ENSCVAG00000020558	snx25	99	68.847	ENSSFOG00015020775	SNX25	88	68.847	Scleropages_formosus
ENSCVAG00000020558	snx25	99	90.299	ENSSMAG00000014099	snx25	100	90.299	Scophthalmus_maximus
ENSCVAG00000020558	snx25	97	92.875	ENSSDUG00000014434	snx25	100	92.875	Seriola_dumerili
ENSCVAG00000020558	snx25	99	93.885	ENSXMAG00000003919	snx25	99	93.165	Xiphophorus_maculatus