EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000020563 (Gene tree)
Gene ID: 107082896
Gene Symbol: ncbp3
Alias: zgc:55870
Full Name: nuclear cap binding subunit 3
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 12302 bases
Position: chrKL652565.1:486692-498993
Accession: 107082896
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000031311	NCBP3	PF10309.9	2.9e-21	1	1
ENSCVAP00000031314	NCBP3	PF10309.9	3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000026056	-	2001	XM_015371794	ENSCVAP00000031314	666 (aa)	XP_015227280	-
ENSCVAT00000026049	-	1932	-	ENSCVAP00000031311	643 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000020563's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000020563's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000020563	ncbp3	98	51.198	ENSG00000074356	NCBP3	99	50.870	Homo_sapiens
ENSCVAG00000020563	ncbp3	100	75.783	ENSAPOG00000020809	ncbp3	100	73.736	Acanthochromis_polyacanthus
ENSCVAG00000020563	ncbp3	98	50.601	ENSAMEG00000009372	NCBP3	94	51.356	Ailuropoda_melanoleuca
ENSCVAG00000020563	ncbp3	83	73.524	ENSACIG00000024257	ncbp3	100	69.436	Amphilophus_citrinellus
ENSCVAG00000020563	ncbp3	100	74.964	ENSAPEG00000020857	ncbp3	100	73.492	Amphiprion_percula
ENSCVAG00000020563	ncbp3	98	74.818	ENSATEG00000010801	ncbp3	100	73.722	Anabas_testudineus
ENSCVAG00000020563	ncbp3	88	53.807	ENSAPLG00000007373	NCBP3	96	54.054	Anas_platyrhynchos
ENSCVAG00000020563	ncbp3	100	41.704	ENSANAG00000020550	-	90	44.624	Aotus_nancymaae
ENSCVAG00000020563	ncbp3	86	53.541	ENSANAG00000024918	-	87	52.073	Aotus_nancymaae
ENSCVAG00000020563	ncbp3	100	71.835	ENSACLG00000000455	ncbp3	100	71.165	Astatotilapia_calliptera
ENSCVAG00000020563	ncbp3	98	60.704	ENSAMXG00000005968	ncbp3	99	59.943	Astyanax_mexicanus
ENSCVAG00000020563	ncbp3	98	49.474	ENSBTAG00000016621	NCBP3	99	49.564	Bos_taurus
ENSCVAG00000020563	ncbp3	98	48.571	ENSCAFG00000019371	NCBP3	95	47.612	Canis_familiaris
ENSCVAG00000020563	ncbp3	98	48.862	ENSCAFG00020008143	NCBP3	95	47.612	Canis_lupus_dingo
ENSCVAG00000020563	ncbp3	100	51.335	ENSCHIG00000009002	NCBP3	99	50.000	Capra_hircus
ENSCVAG00000020563	ncbp3	98	51.579	ENSTSYG00000008184	NCBP3	99	50.508	Carlito_syrichta
ENSCVAG00000020563	ncbp3	86	53.966	ENSCAPG00000016045	NCBP3	93	52.824	Cavia_aperea
ENSCVAG00000020563	ncbp3	98	52.252	ENSCPOG00000015529	NCBP3	99	50.592	Cavia_porcellus
ENSCVAG00000020563	ncbp3	98	51.198	ENSCCAG00000021154	NCBP3	99	49.564	Cebus_capucinus
ENSCVAG00000020563	ncbp3	98	50.226	ENSCATG00000013041	NCBP3	94	48.865	Cercocebus_atys
ENSCVAG00000020563	ncbp3	98	51.355	ENSCLAG00000012229	NCBP3	99	49.563	Chinchilla_lanigera
ENSCVAG00000020563	ncbp3	98	48.802	ENSCSAG00000013543	NCBP3	99	47.529	Chlorocebus_sabaeus
ENSCVAG00000020563	ncbp3	98	51.360	ENSCHOG00000012323	NCBP3	99	48.977	Choloepus_hoffmanni
ENSCVAG00000020563	ncbp3	100	50.223	ENSCPBG00000014824	NCBP3	99	50.439	Chrysemys_picta_bellii
ENSCVAG00000020563	ncbp3	98	49.614	ENSCANG00000033561	NCBP3	99	48.265	Colobus_angolensis_palliatus
ENSCVAG00000020563	ncbp3	98	49.405	ENSCGRG00001018538	Ncbp3	99	48.472	Cricetulus_griseus_chok1gshd
ENSCVAG00000020563	ncbp3	86	50.430	ENSCGRG00000015075	Ncbp3	96	50.332	Cricetulus_griseus_crigri
ENSCVAG00000020563	ncbp3	100	67.668	ENSCSEG00000006375	ncbp3	100	65.541	Cynoglossus_semilaevis
ENSCVAG00000020563	ncbp3	98	61.230	ENSDARG00000044597	ncbp3	99	60.113	Danio_rerio
ENSCVAG00000020563	ncbp3	98	51.061	ENSDNOG00000006490	NCBP3	94	49.231	Dasypus_novemcinctus
ENSCVAG00000020563	ncbp3	100	50.221	ENSDORG00000010141	Ncbp3	99	49.419	Dipodomys_ordii
ENSCVAG00000020563	ncbp3	92	36.321	ENSEBUG00000004541	ncbp3	92	35.285	Eptatretus_burgeri
ENSCVAG00000020563	ncbp3	98	51.212	ENSEASG00005013399	NCBP3	94	47.879	Equus_asinus_asinus
ENSCVAG00000020563	ncbp3	98	51.212	ENSECAG00000008444	NCBP3	94	47.879	Equus_caballus
ENSCVAG00000020563	ncbp3	59	54.453	ENSEEUG00000008573	NCBP3	80	46.320	Erinaceus_europaeus
ENSCVAG00000020563	ncbp3	100	63.380	ENSELUG00000009182	ncbp3	99	61.165	Esox_lucius
ENSCVAG00000020563	ncbp3	98	50.523	ENSFCAG00000007929	NCBP3	99	48.542	Felis_catus
ENSCVAG00000020563	ncbp3	93	51.118	ENSFALG00000006704	NCBP3	98	49.843	Ficedula_albicollis
ENSCVAG00000020563	ncbp3	98	52.560	ENSFDAG00000013355	NCBP3	99	49.125	Fukomys_damarensis
ENSCVAG00000020563	ncbp3	98	69.630	ENSFHEG00000005607	ncbp3	100	69.062	Fundulus_heteroclitus
ENSCVAG00000020563	ncbp3	77	57.321	ENSGMOG00000001007	ncbp3	79	51.935	Gadus_morhua
ENSCVAG00000020563	ncbp3	100	49.926	ENSGALG00000002653	NCBP3	99	50.657	Gallus_gallus
ENSCVAG00000020563	ncbp3	79	82.707	ENSGAFG00000008912	ncbp3	80	82.143	Gambusia_affinis
ENSCVAG00000020563	ncbp3	100	66.911	ENSGACG00000020902	ncbp3	98	65.831	Gasterosteus_aculeatus
ENSCVAG00000020563	ncbp3	100	48.291	ENSGAGG00000014490	NCBP3	99	49.708	Gopherus_agassizii
ENSCVAG00000020563	ncbp3	98	51.124	ENSGGOG00000007496	NCBP3	99	50.798	Gorilla_gorilla
ENSCVAG00000020563	ncbp3	100	56.593	ENSHBUG00000019541	ncbp3	100	55.704	Haplochromis_burtoni
ENSCVAG00000020563	ncbp3	98	51.355	ENSHGLG00000015839	NCBP3	99	49.417	Heterocephalus_glaber_female
ENSCVAG00000020563	ncbp3	98	51.355	ENSHGLG00100007256	NCBP3	99	49.417	Heterocephalus_glaber_male
ENSCVAG00000020563	ncbp3	100	68.576	ENSHCOG00000004161	ncbp3	100	66.811	Hippocampus_comes
ENSCVAG00000020563	ncbp3	98	62.297	ENSIPUG00000024397	ncbp3	99	60.699	Ictalurus_punctatus
ENSCVAG00000020563	ncbp3	70	57.419	ENSSTOG00000002101	NCBP3	95	54.947	Ictidomys_tridecemlineatus
ENSCVAG00000020563	ncbp3	98	43.609	ENSJJAG00000000634	Ncbp3	99	42.940	Jaculus_jaculus
ENSCVAG00000020563	ncbp3	98	76.135	ENSKMAG00000001932	ncbp3	100	75.036	Kryptolebias_marmoratus
ENSCVAG00000020563	ncbp3	98	66.282	ENSLBEG00000001558	-	100	64.831	Labrus_bergylta
ENSCVAG00000020563	ncbp3	98	69.323	ENSLBEG00000006036	ncbp3	100	69.083	Labrus_bergylta
ENSCVAG00000020563	ncbp3	75	71.429	ENSLACG00000018791	NCBP3	99	46.317	Latimeria_chalumnae
ENSCVAG00000020563	ncbp3	98	57.353	ENSLOCG00000006706	ncbp3	99	57.434	Lepisosteus_oculatus
ENSCVAG00000020563	ncbp3	98	51.355	ENSLAFG00000002067	NCBP3	99	49.125	Loxodonta_africana
ENSCVAG00000020563	ncbp3	98	51.201	ENSMFAG00000024176	NCBP3	99	49.343	Macaca_fascicularis
ENSCVAG00000020563	ncbp3	98	51.201	ENSMMUG00000008556	NCBP3	99	49.343	Macaca_mulatta
ENSCVAG00000020563	ncbp3	98	50.302	ENSMNEG00000041374	NCBP3	94	48.407	Macaca_nemestrina
ENSCVAG00000020563	ncbp3	86	52.496	ENSMLEG00000034703	NCBP3	96	52.239	Mandrillus_leucophaeus
ENSCVAG00000020563	ncbp3	100	73.153	ENSMAMG00000022461	ncbp3	100	72.727	Mastacembelus_armatus
ENSCVAG00000020563	ncbp3	100	71.693	ENSMZEG00005027802	ncbp3	100	70.881	Maylandia_zebra
ENSCVAG00000020563	ncbp3	95	51.553	ENSMGAG00000004685	NCBP3	98	50.943	Meleagris_gallopavo
ENSCVAG00000020563	ncbp3	98	47.904	ENSMICG00000015798	NCBP3	99	46.821	Microcebus_murinus
ENSCVAG00000020563	ncbp3	98	49.626	ENSMOCG00000016446	Ncbp3	99	48.696	Microtus_ochrogaster
ENSCVAG00000020563	ncbp3	98	69.254	ENSMMOG00000012577	ncbp3	99	68.713	Mola_mola
ENSCVAG00000020563	ncbp3	98	70.441	ENSMALG00000009173	ncbp3	99	69.220	Monopterus_albus
ENSCVAG00000020563	ncbp3	98	52.410	MGP_CAROLIEiJ_G0016684	Ncbp3	99	48.980	Mus_caroli
ENSCVAG00000020563	ncbp3	98	51.802	ENSMUSG00000020783	Ncbp3	99	48.980	Mus_musculus
ENSCVAG00000020563	ncbp3	98	51.874	MGP_PahariEiJ_G0017817	Ncbp3	99	48.980	Mus_pahari
ENSCVAG00000020563	ncbp3	98	51.802	MGP_SPRETEiJ_G0017521	Ncbp3	99	48.980	Mus_spretus
ENSCVAG00000020563	ncbp3	98	50.000	ENSMPUG00000012357	NCBP3	94	47.879	Mustela_putorius_furo
ENSCVAG00000020563	ncbp3	98	51.429	ENSMLUG00000017060	NCBP3	99	49.343	Myotis_lucifugus
ENSCVAG00000020563	ncbp3	98	51.054	ENSNGAG00000020321	Ncbp3	99	49.273	Nannospalax_galili
ENSCVAG00000020563	ncbp3	89	63.636	ENSNBRG00000017354	ncbp3	100	63.435	Neolamprologus_brichardi
ENSCVAG00000020563	ncbp3	85	54.045	ENSNLEG00000017279	NCBP3	93	53.311	Nomascus_leucogenys
ENSCVAG00000020563	ncbp3	67	59.322	ENSMEUG00000015701	-	78	59.322	Notamacropus_eugenii
ENSCVAG00000020563	ncbp3	98	49.699	ENSOPRG00000016925	NCBP3	99	47.598	Ochotona_princeps
ENSCVAG00000020563	ncbp3	98	52.560	ENSODEG00000016617	NCBP3	99	49.271	Octodon_degus
ENSCVAG00000020563	ncbp3	100	69.943	ENSONIG00000007434	ncbp3	100	70.370	Oreochromis_niloticus
ENSCVAG00000020563	ncbp3	95	50.621	ENSOANG00000010109	NCBP3	93	52.077	Ornithorhynchus_anatinus
ENSCVAG00000020563	ncbp3	98	50.152	ENSOCUG00000008045	NCBP3	95	48.358	Oryctolagus_cuniculus
ENSCVAG00000020563	ncbp3	98	70.739	ENSORLG00000013703	ncbp3	100	70.728	Oryzias_latipes
ENSCVAG00000020563	ncbp3	98	70.120	ENSORLG00020011764	ncbp3	100	69.881	Oryzias_latipes_hni
ENSCVAG00000020563	ncbp3	98	70.120	ENSORLG00015018733	ncbp3	100	69.881	Oryzias_latipes_hsok
ENSCVAG00000020563	ncbp3	98	73.083	ENSOMEG00000017858	ncbp3	100	71.829	Oryzias_melastigma
ENSCVAG00000020563	ncbp3	98	51.502	ENSOGAG00000008803	NCBP3	99	49.419	Otolemur_garnettii
ENSCVAG00000020563	ncbp3	83	52.424	ENSOARG00000017750	NCBP3	99	52.415	Ovis_aries
ENSCVAG00000020563	ncbp3	98	51.647	ENSPPAG00000030530	NCBP3	99	50.725	Pan_paniscus
ENSCVAG00000020563	ncbp3	98	49.925	ENSPPRG00000022474	NCBP3	99	48.688	Panthera_pardus
ENSCVAG00000020563	ncbp3	86	51.458	ENSPTIG00000009607	NCBP3	86	50.831	Panthera_tigris_altaica
ENSCVAG00000020563	ncbp3	98	51.570	ENSPTRG00000008578	NCBP3	99	50.651	Pan_troglodytes
ENSCVAG00000020563	ncbp3	98	51.124	ENSPANG00000024364	NCBP3	99	50.943	Papio_anubis
ENSCVAG00000020563	ncbp3	91	62.069	ENSPKIG00000008466	ncbp3	90	61.275	Paramormyrops_kingsleyae
ENSCVAG00000020563	ncbp3	83	50.977	ENSPSIG00000013732	NCBP3	98	51.786	Pelodiscus_sinensis
ENSCVAG00000020563	ncbp3	99	58.211	ENSPMGG00000003344	ncbp3	99	55.878	Periophthalmus_magnuspinnatus
ENSCVAG00000020563	ncbp3	98	49.102	ENSPEMG00000007746	Ncbp3	99	48.617	Peromyscus_maniculatus_bairdii
ENSCVAG00000020563	ncbp3	100	49.006	ENSPCIG00000008605	NCBP3	99	47.653	Phascolarctos_cinereus
ENSCVAG00000020563	ncbp3	87	81.494	ENSPFOG00000000721	ncbp3	95	82.137	Poecilia_formosa
ENSCVAG00000020563	ncbp3	98	80.506	ENSPLAG00000015399	ncbp3	100	80.882	Poecilia_latipinna
ENSCVAG00000020563	ncbp3	98	79.643	ENSPMEG00000000896	ncbp3	100	80.381	Poecilia_mexicana
ENSCVAG00000020563	ncbp3	98	79.254	ENSPREG00000001681	ncbp3	100	79.559	Poecilia_reticulata
ENSCVAG00000020563	ncbp3	98	50.000	ENSPPYG00000007823	NCBP3	95	48.512	Pongo_abelii
ENSCVAG00000020563	ncbp3	100	49.703	ENSPCAG00000012614	NCBP3	99	47.953	Procavia_capensis
ENSCVAG00000020563	ncbp3	98	51.278	ENSPCOG00000016793	NCBP3	99	50.943	Propithecus_coquereli
ENSCVAG00000020563	ncbp3	97	47.104	ENSPVAG00000012746	NCBP3	83	50.704	Pteropus_vampyrus
ENSCVAG00000020563	ncbp3	100	67.338	ENSPNYG00000022677	ncbp3	100	65.379	Pundamilia_nyererei
ENSCVAG00000020563	ncbp3	98	61.029	ENSPNAG00000003219	ncbp3	99	60.920	Pygocentrus_nattereri
ENSCVAG00000020563	ncbp3	98	52.108	ENSRNOG00000018550	Ncbp3	99	48.542	Rattus_norvegicus
ENSCVAG00000020563	ncbp3	98	51.124	ENSRBIG00000033247	NCBP3	99	50.943	Rhinopithecus_bieti
ENSCVAG00000020563	ncbp3	98	51.124	ENSRROG00000043833	NCBP3	99	49.782	Rhinopithecus_roxellana
ENSCVAG00000020563	ncbp3	98	52.560	ENSSBOG00000023178	NCBP3	99	51.017	Saimiri_boliviensis_boliviensis
ENSCVAG00000020563	ncbp3	83	51.865	ENSSHAG00000003466	NCBP3	99	50.000	Sarcophilus_harrisii
ENSCVAG00000020563	ncbp3	100	59.259	ENSSFOG00015005808	ncbp3	99	59.038	Scleropages_formosus
ENSCVAG00000020563	ncbp3	98	67.564	ENSSMAG00000010917	ncbp3	100	69.155	Scophthalmus_maximus
ENSCVAG00000020563	ncbp3	100	70.815	ENSSDUG00000023402	ncbp3	100	72.316	Seriola_dumerili
ENSCVAG00000020563	ncbp3	57	72.324	ENSSLDG00000000742	ncbp3	100	60.921	Seriola_lalandi_dorsalis
ENSCVAG00000020563	ncbp3	83	54.737	ENSSARG00000006634	NCBP3	86	54.301	Sorex_araneus
ENSCVAG00000020563	ncbp3	100	49.778	ENSSPUG00000002240	NCBP3	99	47.584	Sphenodon_punctatus
ENSCVAG00000020563	ncbp3	100	74.399	ENSSPAG00000011223	ncbp3	100	75.389	Stegastes_partitus
ENSCVAG00000020563	ncbp3	98	52.108	ENSSSCG00000017870	NCBP3	99	49.855	Sus_scrofa
ENSCVAG00000020563	ncbp3	98	50.377	ENSTGUG00000005396	NCBP3	99	49.708	Taeniopygia_guttata
ENSCVAG00000020563	ncbp3	100	68.659	ENSTRUG00000003769	ncbp3	100	68.035	Takifugu_rubripes
ENSCVAG00000020563	ncbp3	100	67.341	ENSTNIG00000004776	ncbp3	100	67.105	Tetraodon_nigroviridis
ENSCVAG00000020563	ncbp3	98	46.456	ENSTBEG00000006308	NCBP3	99	45.242	Tupaia_belangeri
ENSCVAG00000020563	ncbp3	83	56.452	ENSTTRG00000005845	NCBP3	86	56.452	Tursiops_truncatus
ENSCVAG00000020563	ncbp3	98	48.170	ENSUAMG00000014043	NCBP3	99	47.293	Ursus_americanus
ENSCVAG00000020563	ncbp3	86	51.384	ENSUMAG00000007519	NCBP3	94	50.664	Ursus_maritimus
ENSCVAG00000020563	ncbp3	98	49.469	ENSVVUG00000026079	NCBP3	94	48.318	Vulpes_vulpes
ENSCVAG00000020563	ncbp3	100	46.487	ENSXETG00000012965	ncbp3	99	46.211	Xenopus_tropicalis
ENSCVAG00000020563	ncbp3	99	67.708	ENSXCOG00000018393	ncbp3	100	80.513	Xiphophorus_couchianus
ENSCVAG00000020563	ncbp3	98	79.460	ENSXMAG00000006849	ncbp3	100	79.764	Xiphophorus_maculatus