EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000020600 (Gene tree)
Gene ID: 107081716
Gene Symbol: thoc1
Alias: p84
Full Name: THO complex 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 9588 bases
Position: chrKL652539.1:1432256-1441843
Accession: 107081716
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000031387	efThoc1	PF11957.8	9.8e-144	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000026201	-	3081	XM_015369915	ENSCVAP00000031387	654 (aa)	XP_015225401	UPI0007425A29

Gene Model

Click here to download ENSCVAG00000020600's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000020600's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000020600	thoc1	99	71.933	ENSG00000079134	THOC1	99	77.206	Homo_sapiens
ENSCVAG00000020600	thoc1	99	72.086	ENSAMEG00000006645	THOC1	98	72.086	Ailuropoda_melanoleuca
ENSCVAG00000020600	thoc1	98	85.692	ENSACIG00000019392	thoc1	99	85.692	Amphilophus_citrinellus
ENSCVAG00000020600	thoc1	100	85.933	ENSAOCG00000008391	thoc1	100	85.933	Amphiprion_ocellaris
ENSCVAG00000020600	thoc1	100	91.437	ENSAPEG00000001093	thoc1	100	91.437	Amphiprion_percula
ENSCVAG00000020600	thoc1	100	90.520	ENSATEG00000004783	thoc1	100	90.520	Anabas_testudineus
ENSCVAG00000020600	thoc1	98	71.672	ENSAPLG00000016149	THOC1	97	71.672	Anas_platyrhynchos
ENSCVAG00000020600	thoc1	99	71.254	ENSACAG00000008307	THOC1	96	70.642	Anolis_carolinensis
ENSCVAG00000020600	thoc1	99	71.017	ENSANAG00000033200	THOC1	98	71.017	Aotus_nancymaae
ENSCVAG00000020600	thoc1	100	90.061	ENSACLG00000016836	thoc1	100	90.061	Astatotilapia_calliptera
ENSCVAG00000020600	thoc1	94	75.159	ENSAMXG00000014708	thoc1	98	74.841	Astyanax_mexicanus
ENSCVAG00000020600	thoc1	99	72.239	ENSBTAG00000019215	THOC1	98	72.239	Bos_taurus
ENSCVAG00000020600	thoc1	69	35.560	WBGene00020172	thoc-1	69	35.760	Caenorhabditis_elegans
ENSCVAG00000020600	thoc1	99	71.933	ENSCJAG00000020450	THOC1	98	71.933	Callithrix_jacchus
ENSCVAG00000020600	thoc1	99	72.086	ENSCAFG00000018324	THOC1	98	72.086	Canis_familiaris
ENSCVAG00000020600	thoc1	99	72.086	ENSCAFG00020017894	THOC1	98	72.086	Canis_lupus_dingo
ENSCVAG00000020600	thoc1	99	72.239	ENSCHIG00000015399	THOC1	98	73.113	Capra_hircus
ENSCVAG00000020600	thoc1	99	71.933	ENSTSYG00000010585	THOC1	98	71.933	Carlito_syrichta
ENSCVAG00000020600	thoc1	97	51.633	ENSCAPG00000016270	THOC1	97	51.633	Cavia_aperea
ENSCVAG00000020600	thoc1	99	71.626	ENSCPOG00000000959	THOC1	98	71.626	Cavia_porcellus
ENSCVAG00000020600	thoc1	99	71.933	ENSCCAG00000025766	THOC1	98	71.933	Cebus_capucinus
ENSCVAG00000020600	thoc1	99	69.632	ENSCATG00000028180	THOC1	96	75.434	Cercocebus_atys
ENSCVAG00000020600	thoc1	97	73.113	ENSCLAG00000009117	THOC1	99	73.113	Chinchilla_lanigera
ENSCVAG00000020600	thoc1	99	71.933	ENSCSAG00000017631	THOC1	98	71.933	Chlorocebus_sabaeus
ENSCVAG00000020600	thoc1	79	75.934	ENSCHOG00000010609	THOC1	78	75.934	Choloepus_hoffmanni
ENSCVAG00000020600	thoc1	99	72.435	ENSCPBG00000027558	THOC1	99	72.435	Chrysemys_picta_bellii
ENSCVAG00000020600	thoc1	74	47.273	ENSCING00000007663	-	99	47.284	Ciona_intestinalis
ENSCVAG00000020600	thoc1	94	47.785	ENSCSAVG00000010649	-	100	47.785	Ciona_savignyi
ENSCVAG00000020600	thoc1	99	71.779	ENSCANG00000034265	THOC1	96	75.802	Colobus_angolensis_palliatus
ENSCVAG00000020600	thoc1	99	70.859	ENSCGRG00001016464	Thoc1	98	70.859	Cricetulus_griseus_chok1gshd
ENSCVAG00000020600	thoc1	99	70.898	ENSCGRG00000010269	-	99	71.855	Cricetulus_griseus_crigri
ENSCVAG00000020600	thoc1	90	59.694	ENSCGRG00000003390	-	97	59.694	Cricetulus_griseus_crigri
ENSCVAG00000020600	thoc1	99	87.234	ENSCSEG00000012486	thoc1	99	88.264	Cynoglossus_semilaevis
ENSCVAG00000020600	thoc1	100	81.832	ENSDARG00000088246	thoc1	100	81.832	Danio_rerio
ENSCVAG00000020600	thoc1	99	71.736	ENSDNOG00000019217	THOC1	98	71.736	Dasypus_novemcinctus
ENSCVAG00000020600	thoc1	97	67.925	ENSDORG00000008060	Thoc1	98	67.925	Dipodomys_ordii
ENSCVAG00000020600	thoc1	81	42.935	FBgn0037382	Hpr1	74	42.391	Drosophila_melanogaster
ENSCVAG00000020600	thoc1	90	54.932	ENSETEG00000004165	THOC1	98	54.252	Echinops_telfairi
ENSCVAG00000020600	thoc1	92	62.687	ENSEBUG00000005998	thoc1	98	63.350	Eptatretus_burgeri
ENSCVAG00000020600	thoc1	99	71.779	ENSEASG00005002549	THOC1	94	71.166	Equus_asinus_asinus
ENSCVAG00000020600	thoc1	99	71.933	ENSECAG00000009267	THOC1	88	71.933	Equus_caballus
ENSCVAG00000020600	thoc1	79	58.156	ENSEEUG00000012214	-	81	58.156	Erinaceus_europaeus
ENSCVAG00000020600	thoc1	100	85.084	ENSELUG00000023277	thoc1	100	85.084	Esox_lucius
ENSCVAG00000020600	thoc1	99	72.393	ENSFCAG00000022454	THOC1	85	72.393	Felis_catus
ENSCVAG00000020600	thoc1	97	71.763	ENSFALG00000006205	THOC1	99	71.763	Ficedula_albicollis
ENSCVAG00000020600	thoc1	98	72.050	ENSFDAG00000006842	THOC1	99	72.050	Fukomys_damarensis
ENSCVAG00000020600	thoc1	100	94.495	ENSFHEG00000008841	thoc1	100	94.495	Fundulus_heteroclitus
ENSCVAG00000020600	thoc1	99	86.810	ENSGMOG00000011486	thoc1	99	86.810	Gadus_morhua
ENSCVAG00000020600	thoc1	99	71.669	ENSGALG00000014915	THOC1	99	70.953	Gallus_gallus
ENSCVAG00000020600	thoc1	100	92.813	ENSGAFG00000021464	thoc1	100	92.813	Gambusia_affinis
ENSCVAG00000020600	thoc1	100	88.991	ENSGACG00000017361	thoc1	100	88.991	Gasterosteus_aculeatus
ENSCVAG00000020600	thoc1	99	73.047	ENSGAGG00000021230	-	97	73.047	Gopherus_agassizii
ENSCVAG00000020600	thoc1	99	72.086	ENSGGOG00000003013	THOC1	98	72.086	Gorilla_gorilla
ENSCVAG00000020600	thoc1	100	90.214	ENSHBUG00000009096	thoc1	100	90.214	Haplochromis_burtoni
ENSCVAG00000020600	thoc1	99	71.933	ENSHGLG00000003712	-	98	71.933	Heterocephalus_glaber_female
ENSCVAG00000020600	thoc1	70	65.482	ENSHGLG00000009264	-	98	65.482	Heterocephalus_glaber_female
ENSCVAG00000020600	thoc1	99	71.779	ENSHGLG00100003570	THOC1	98	71.779	Heterocephalus_glaber_male
ENSCVAG00000020600	thoc1	68	66.129	ENSHGLG00100002225	-	98	66.129	Heterocephalus_glaber_male
ENSCVAG00000020600	thoc1	99	69.969	ENSIPUG00000005306	thoc1	100	69.040	Ictalurus_punctatus
ENSCVAG00000020600	thoc1	99	72.086	ENSSTOG00000006484	THOC1	98	72.086	Ictidomys_tridecemlineatus
ENSCVAG00000020600	thoc1	52	72.093	ENSJJAG00000014893	-	96	72.093	Jaculus_jaculus
ENSCVAG00000020600	thoc1	100	91.437	ENSKMAG00000003904	thoc1	100	91.437	Kryptolebias_marmoratus
ENSCVAG00000020600	thoc1	100	90.520	ENSLBEG00000020372	thoc1	98	90.520	Labrus_bergylta
ENSCVAG00000020600	thoc1	99	72.588	ENSLACG00000014869	THOC1	99	72.282	Latimeria_chalumnae
ENSCVAG00000020600	thoc1	100	81.583	ENSLOCG00000002097	thoc1	99	81.279	Lepisosteus_oculatus
ENSCVAG00000020600	thoc1	99	71.933	ENSLAFG00000009585	THOC1	98	71.933	Loxodonta_africana
ENSCVAG00000020600	thoc1	99	71.933	ENSMFAG00000041520	THOC1	98	71.933	Macaca_fascicularis
ENSCVAG00000020600	thoc1	99	71.933	ENSMMUG00000004662	THOC1	98	71.933	Macaca_mulatta
ENSCVAG00000020600	thoc1	99	71.933	ENSMNEG00000040177	THOC1	98	71.933	Macaca_nemestrina
ENSCVAG00000020600	thoc1	99	71.933	ENSMLEG00000034201	THOC1	98	71.933	Mandrillus_leucophaeus
ENSCVAG00000020600	thoc1	96	87.719	ENSMAMG00000016747	thoc1	100	87.719	Mastacembelus_armatus
ENSCVAG00000020600	thoc1	100	90.061	ENSMZEG00005024609	thoc1	100	90.061	Maylandia_zebra
ENSCVAG00000020600	thoc1	97	71.831	ENSMGAG00000009811	THOC1	99	71.831	Meleagris_gallopavo
ENSCVAG00000020600	thoc1	99	70.706	ENSMAUG00000010272	Thoc1	98	70.706	Mesocricetus_auratus
ENSCVAG00000020600	thoc1	99	72.086	ENSMICG00000027200	THOC1	98	72.086	Microcebus_murinus
ENSCVAG00000020600	thoc1	99	62.348	ENSMOCG00000014924	-	96	61.738	Microtus_ochrogaster
ENSCVAG00000020600	thoc1	99	70.092	ENSMOCG00000014536	-	85	70.092	Microtus_ochrogaster
ENSCVAG00000020600	thoc1	93	90.033	ENSMMOG00000011772	thoc1	100	90.033	Mola_mola
ENSCVAG00000020600	thoc1	99	71.277	ENSMODG00000021482	THOC1	98	71.277	Monodelphis_domestica
ENSCVAG00000020600	thoc1	100	88.838	ENSMALG00000021872	thoc1	100	88.838	Monopterus_albus
ENSCVAG00000020600	thoc1	99	70.706	MGP_CAROLIEiJ_G0021989	Thoc1	98	70.706	Mus_caroli
ENSCVAG00000020600	thoc1	99	70.859	ENSMUSG00000024287	Thoc1	98	70.859	Mus_musculus
ENSCVAG00000020600	thoc1	99	70.859	MGP_PahariEiJ_G0018726	Thoc1	98	70.859	Mus_pahari
ENSCVAG00000020600	thoc1	99	70.859	MGP_SPRETEiJ_G0022905	Thoc1	98	70.859	Mus_spretus
ENSCVAG00000020600	thoc1	99	72.086	ENSMPUG00000005448	THOC1	98	72.086	Mustela_putorius_furo
ENSCVAG00000020600	thoc1	90	65.604	ENSMLUG00000027965	-	99	65.604	Myotis_lucifugus
ENSCVAG00000020600	thoc1	61	64.411	ENSMLUG00000024912	-	100	64.411	Myotis_lucifugus
ENSCVAG00000020600	thoc1	99	70.859	ENSMLUG00000004090	-	98	70.859	Myotis_lucifugus
ENSCVAG00000020600	thoc1	99	71.779	ENSNGAG00000001401	-	98	71.779	Nannospalax_galili
ENSCVAG00000020600	thoc1	97	57.614	ENSNGAG00000008061	-	97	57.614	Nannospalax_galili
ENSCVAG00000020600	thoc1	98	88.245	ENSNBRG00000005991	thoc1	97	88.245	Neolamprologus_brichardi
ENSCVAG00000020600	thoc1	99	71.933	ENSNLEG00000006835	THOC1	98	71.933	Nomascus_leucogenys
ENSCVAG00000020600	thoc1	89	75.161	ENSMEUG00000009756	THOC1	82	75.161	Notamacropus_eugenii
ENSCVAG00000020600	thoc1	99	57.975	ENSOPRG00000001108	THOC1	98	57.975	Ochotona_princeps
ENSCVAG00000020600	thoc1	99	67.025	ENSODEG00000006623	THOC1	98	67.025	Octodon_degus
ENSCVAG00000020600	thoc1	100	90.520	ENSONIG00000009440	thoc1	99	90.214	Oreochromis_niloticus
ENSCVAG00000020600	thoc1	99	72.086	ENSOCUG00000011601	THOC1	98	72.086	Oryctolagus_cuniculus
ENSCVAG00000020600	thoc1	100	90.979	ENSORLG00000017629	thoc1	100	90.979	Oryzias_latipes
ENSCVAG00000020600	thoc1	100	91.131	ENSORLG00020007567	thoc1	100	91.131	Oryzias_latipes_hni
ENSCVAG00000020600	thoc1	100	91.131	ENSORLG00015007356	thoc1	100	91.131	Oryzias_latipes_hsok
ENSCVAG00000020600	thoc1	100	89.602	ENSOMEG00000008200	thoc1	100	89.450	Oryzias_melastigma
ENSCVAG00000020600	thoc1	99	69.018	ENSOGAG00000000470	THOC1	98	69.018	Otolemur_garnettii
ENSCVAG00000020600	thoc1	98	72.926	ENSOARG00000009238	THOC1	96	72.926	Ovis_aries
ENSCVAG00000020600	thoc1	99	72.086	ENSPPAG00000031812	THOC1	98	72.086	Pan_paniscus
ENSCVAG00000020600	thoc1	99	71.779	ENSPPRG00000023794	THOC1	96	76.012	Panthera_pardus
ENSCVAG00000020600	thoc1	99	71.779	ENSPTIG00000007469	THOC1	96	76.012	Panthera_tigris_altaica
ENSCVAG00000020600	thoc1	99	71.168	ENSPTRG00000009816	THOC1	98	71.168	Pan_troglodytes
ENSCVAG00000020600	thoc1	99	71.037	ENSPANG00000008665	THOC1	98	71.037	Papio_anubis
ENSCVAG00000020600	thoc1	100	82.137	ENSPKIG00000005906	thoc1	100	82.901	Paramormyrops_kingsleyae
ENSCVAG00000020600	thoc1	81	75.947	ENSPSIG00000007691	THOC1	97	75.947	Pelodiscus_sinensis
ENSCVAG00000020600	thoc1	97	83.019	ENSPMGG00000008279	thoc1	97	83.019	Periophthalmus_magnuspinnatus
ENSCVAG00000020600	thoc1	99	70.706	ENSPEMG00000021789	Thoc1	98	70.706	Peromyscus_maniculatus_bairdii
ENSCVAG00000020600	thoc1	74	72.041	ENSPCIG00000026942	THOC1	97	72.041	Phascolarctos_cinereus
ENSCVAG00000020600	thoc1	100	92.355	ENSPFOG00000011673	thoc1	100	92.355	Poecilia_formosa
ENSCVAG00000020600	thoc1	100	92.508	ENSPLAG00000019648	thoc1	100	92.508	Poecilia_latipinna
ENSCVAG00000020600	thoc1	100	92.508	ENSPMEG00000007083	thoc1	100	92.508	Poecilia_mexicana
ENSCVAG00000020600	thoc1	100	92.966	ENSPREG00000006719	thoc1	100	92.966	Poecilia_reticulata
ENSCVAG00000020600	thoc1	74	74.691	ENSPPYG00000009049	-	98	74.691	Pongo_abelii
ENSCVAG00000020600	thoc1	91	72.671	ENSPCAG00000005320	THOC1	91	72.671	Procavia_capensis
ENSCVAG00000020600	thoc1	99	71.472	ENSPCOG00000009234	THOC1	98	71.472	Propithecus_coquereli
ENSCVAG00000020600	thoc1	99	70.552	ENSPVAG00000004007	THOC1	98	70.552	Pteropus_vampyrus
ENSCVAG00000020600	thoc1	100	90.214	ENSPNYG00000019152	thoc1	100	90.214	Pundamilia_nyererei
ENSCVAG00000020600	thoc1	100	82.110	ENSPNAG00000023390	thoc1	100	81.804	Pygocentrus_nattereri
ENSCVAG00000020600	thoc1	81	58.730	ENSRNOG00000015332	Thoc1	94	58.730	Rattus_norvegicus
ENSCVAG00000020600	thoc1	99	71.168	ENSRBIG00000033738	THOC1	99	73.484	Rhinopithecus_bieti
ENSCVAG00000020600	thoc1	99	71.933	ENSRROG00000044988	THOC1	96	75.802	Rhinopithecus_roxellana
ENSCVAG00000020600	thoc1	99	71.779	ENSSBOG00000016556	THOC1	98	71.779	Saimiri_boliviensis_boliviensis
ENSCVAG00000020600	thoc1	99	72.086	ENSSHAG00000014829	THOC1	98	72.086	Sarcophilus_harrisii
ENSCVAG00000020600	thoc1	100	84.862	ENSSFOG00015021527	thoc1	100	84.862	Scleropages_formosus
ENSCVAG00000020600	thoc1	100	86.544	ENSSMAG00000018465	thoc1	99	86.544	Scophthalmus_maximus
ENSCVAG00000020600	thoc1	100	90.061	ENSSDUG00000016810	thoc1	100	90.061	Seriola_dumerili
ENSCVAG00000020600	thoc1	100	89.755	ENSSLDG00000015555	thoc1	100	89.755	Seriola_lalandi_dorsalis
ENSCVAG00000020600	thoc1	87	70.656	ENSSARG00000006910	THOC1	86	70.656	Sorex_araneus
ENSCVAG00000020600	thoc1	98	71.229	ENSSPUG00000007238	THOC1	98	71.077	Sphenodon_punctatus
ENSCVAG00000020600	thoc1	100	85.823	ENSSPAG00000018847	thoc1	99	85.823	Stegastes_partitus
ENSCVAG00000020600	thoc1	99	72.086	ENSSSCG00000025653	THOC1	93	72.086	Sus_scrofa
ENSCVAG00000020600	thoc1	99	71.669	ENSTGUG00000010204	THOC1	99	71.669	Taeniopygia_guttata
ENSCVAG00000020600	thoc1	100	88.073	ENSTRUG00000013518	thoc1	100	88.073	Takifugu_rubripes
ENSCVAG00000020600	thoc1	100	87.462	ENSTNIG00000008473	thoc1	99	87.462	Tetraodon_nigroviridis
ENSCVAG00000020600	thoc1	99	65.031	ENSTBEG00000016920	THOC1	98	65.031	Tupaia_belangeri
ENSCVAG00000020600	thoc1	99	65.951	ENSTTRG00000016664	THOC1	98	65.951	Tursiops_truncatus
ENSCVAG00000020600	thoc1	99	72.239	ENSUAMG00000002527	THOC1	98	72.239	Ursus_americanus
ENSCVAG00000020600	thoc1	99	72.239	ENSUMAG00000019693	THOC1	98	72.239	Ursus_maritimus
ENSCVAG00000020600	thoc1	67	65.816	ENSVPAG00000003726	-	66	65.816	Vicugna_pacos
ENSCVAG00000020600	thoc1	99	72.086	ENSVVUG00000004384	THOC1	98	72.086	Vulpes_vulpes
ENSCVAG00000020600	thoc1	99	69.757	ENSXETG00000003155	thoc1	97	69.757	Xenopus_tropicalis
ENSCVAG00000020600	thoc1	96	85.304	ENSXCOG00000016085	thoc1	91	84.897	Xiphophorus_couchianus
ENSCVAG00000020600	thoc1	100	92.813	ENSXMAG00000002353	thoc1	100	92.813	Xiphophorus_maculatus